RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 CHERPQ8IWX8 916 aaKnown RBP1.67□□□□□ -2.14
CD44-212ENST00000524922 FAM186BQ8IYM0 893 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 CACNA2D3Q8IZS8 1091 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 WDSUB1Q8N9V3 476 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 ZNF527Q8NB42 609 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 SPATA5Q8NB90 893 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 ZMIZ2Q8NF64 920 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 VN1R2Q8NFZ6 395 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 RASSF8Q8NHQ8 419 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 CTCFLQ8NI51 663 aaPredicted RBP1.67□□□□□ -2.14
CD44-212ENST00000524922 SPPL3Q8TCT6 385 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 SECTM1Q8WVN6 248 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 DNASE1L2Q92874 299 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 TTC14Q96N46 770 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 LRFN5Q96NI6 719 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 IWS1Q96ST2 819 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 CSF3RQ99062 836 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 CTDSP1Q9GZU7 261 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 TRPV6Q9H1D0 765 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 MFSD1Q9H3U5 465 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 FBRSL1Q9HCM7 1045 aaKnown RBP1.67□□□□□ -2.14
CD44-212ENST00000524922 C9orf78Q9NZ63 289 aaPredicted RBP1.67□□□□□ -2.14
CD44-212ENST00000524922 SLC9A2Q9UBY0 812 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 SLCO3A1Q9UIG8 710 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 FEM1BQ9UK73 627 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 ZHX1Q9UKY1 873 aaPredicted RBP1.67□□□□□ -2.14
CD44-212ENST00000524922 SIPA1L1O43166 1804 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 FOCADQ5VW36 1801 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 SMCHD1A6NHR9 2005 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 MYO7AQ13402 2215 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 PCNX1Q96RV3 2341 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 PTPRQQ9UMZ3 2332 aa1.67□□□□□ -2.14
CD44-212ENST00000524922 AHCTF1Q8WYP5 2266 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 ATAD5Q96QE3 1844 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 ASXL3Q9C0F0 2248 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 IGKV6D-41A0A0C4DH26 115 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 A0A1W2PRG0 241 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 KANSL1LA0AUZ9 987 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 MBLAC1A4D2B0 266 aaPredicted RBP1.66□□□□□ -2.14
CD44-212ENST00000524922 ENO4A6NNW6 628 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 ERI2A8K979 691 aaKnown RBP1.66□□□□□ -2.14
CD44-212ENST00000524922 RSPH10B2B2RC85 870 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 SNAP23O00161 211 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 EBAG9O00559 213 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 KLK8O60259 260 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 ZNF500O60304 480 aaPredicted RBP1.66□□□□□ -2.14
CD44-212ENST00000524922 CCNT1O60563 726 aaKnown RBP1.66□□□□□ -2.14
CD44-212ENST00000524922 ZBED4O75132 1171 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 SLC22A3O75751 556 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 FAM155BO75949 473 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 ICAM1P05362 532 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 ZNF806P0C7X5 589 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 RSPH10BP0C881 870 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 PCP11498 1178 aaKnown RBP1.66□□□□□ -2.14
CD44-212ENST00000524922 CTNNB1P35222 781 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 RDXP35241 583 aaKnown RBP1.66□□□□□ -2.14
CD44-212ENST00000524922 HNF1BP35680 557 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 PIGAP37287 484 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 CDKN1AP38936 164 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 SKIV2L2P42285 1042 aaKnown RBP1.66□□□□□ -2.14
CD44-212ENST00000524922 CCR3P51677 355 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 NR0B1P51843 470 aaKnown RBP1.66□□□□□ -2.14
CD44-212ENST00000524922 ARSFP54793 590 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 NLRP5P59047 1200 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 DEFB103AP81534 67 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 ECT2LQ008S8 904 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 BTKQ06187 659 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 PICALMQ13492 652 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 SBK1Q52WX2 424 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 WDR78Q5VTH9 848 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 ARHGAP17Q68EM7 881 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 PLEKHA7Q6IQ23 1121 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 NAA16Q6N069 864 aaPredicted RBP1.66□□□□□ -2.14
CD44-212ENST00000524922 KLHL17Q6TDP4 642 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 KLHL24Q6TFL4 600 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 GFRALQ6UXV0 394 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 SYT13Q7L8C5 426 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 RABEPKQ7Z6M1 372 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 LURAP1LQ8IV03 231 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 KIAA2013Q8IYS2 634 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 MAML2Q8IZL2 1156 aaPredicted RBP1.66□□□□□ -2.14
CD44-212ENST00000524922 NME8Q8N427 588 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 ATG16L2Q8NAA4 619 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 MAPK1IP1LQ8NDC0 245 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 CCDC26Q8TAB7 109 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 CHURC1Q8WUH1 139 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 SNRNP27Q8WVK2 155 aaKnown RBP1.66□□□□□ -2.14
CD44-212ENST00000524922 FIG4Q92562 907 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 TANKQ92844 425 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 C3orf49Q96BT1 292 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 RNFT2Q96EX2 444 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 SLC39A13Q96H72 371 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 TRAPPC9Q96Q05 1148 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 TWNKQ96RR1 684 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 RMDN3Q96TC7 470 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 LITAFQ99732 161 aa1.66□□□□□ -2.14
CD44-212ENST00000524922 RIOK1Q9BRS2 568 aaKnown RBP1.66□□□□□ -2.14
CD44-212ENST00000524922 TRMT61BQ9BVS5 477 aaKnown RBP1.66□□□□□ -2.14
CD44-212ENST00000524922 MRPL9Q9BYD2 267 aaKnown RBP1.66□□□□□ -2.14
CD44-212ENST00000524922 IFIH1Q9BYX4 1025 aaKnown RBP1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms