RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 CHST3Q7LGC8 479 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 CAMKMTQ7Z624 323 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 IQCHQ86VS3 1027 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 CEP57Q86XR8 500 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 METTL27Q8N6F8 245 aaPredicted RBP3.78□□□□□ -1.8
SKP1-212ENST00000523966 TC2NQ8N9U0 490 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 PPFIBP2Q8ND30 876 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 PAPD5Q8NDF8 572 aaKnown RBP3.78□□□□□ -1.8
SKP1-212ENST00000523966 RBM15BQ8NDT2 890 aaKnown RBP3.78□□□□□ -1.8
SKP1-212ENST00000523966 OR52I2Q8NH67 350 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 SPATA22Q8NHS9 363 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 WDR20Q8TBZ3 569 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 SECTM1Q8WVN6 248 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 TEKT4Q8WW24 435 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 SEMA4DQ92854 862 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 RMDN1Q96DB5 314 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 PGAP3Q96FM1 320 aaPredicted RBP3.78□□□□□ -1.8
SKP1-212ENST00000523966 OXNAD1Q96HP4 312 aaPredicted RBP3.78□□□□□ -1.8
SKP1-212ENST00000523966 PRMT6Q96LA8 375 aaPredicted RBP3.78□□□□□ -1.8
SKP1-212ENST00000523966 MS4A10Q96PG2 267 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 OR6C1Q96RD1 312 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 TUBA1CQ9BQE3 449 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 FNDC11Q9BVV2 318 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 C1QTNF4Q9BXJ3 329 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 SPRY4Q9C004 299 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 GAREM1Q9H706 876 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 PIH1D3Q9NQM4 214 aaKnown RBP3.78□□□□□ -1.8
SKP1-212ENST00000523966 HAO2Q9NYQ3 351 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 IL17BQ9UHF5 180 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 SLC24A2Q9UI40 661 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 ZNF711Q9Y462 761 aa3.78□□□□□ -1.8
SKP1-212ENST00000523966 PCSK5Q92824 1860 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 EDDM13A0A1B0GTR0 161 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 ZCWPW2A0A1B0GU75 182 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 A0A1W2PP11 408 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 MED19A0JLT2 244 aaPredicted RBP3.77□□□□□ -1.81
SKP1-212ENST00000523966 ELOVL7A1L3X0 281 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 ASPDHA6ND91 283 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 C4orf47A7E2U8 309 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 DVL1O14640 695 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 SLC28A2O43868 658 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 ZNF500O60304 480 aaPredicted RBP3.77□□□□□ -1.81
SKP1-212ENST00000523966 GPR137BO60478 399 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 FGF3P11487 239 aaPredicted RBP3.77□□□□□ -1.81
SKP1-212ENST00000523966 ITGA2P17301 1181 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 SP100P23497 879 aaPredicted RBP3.77□□□□□ -1.81
SKP1-212ENST00000523966 DNASE1P24855 282 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 GABRA5P31644 462 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 AHRP35869 848 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 SLC9A3P48764 834 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 FMO5P49326 533 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 RAB28P51157 221 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 CCR3P51677 355 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 DVL1P1P54792 670 aaPredicted RBP3.77□□□□□ -1.81
SKP1-212ENST00000523966 CDH13P55290 713 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 CDK3Q00526 305 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 POU3F1Q03052 451 aaPredicted RBP3.77□□□□□ -1.81
SKP1-212ENST00000523966 HSPB3Q12988 150 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 ZBTB17Q13105 803 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 KEAP1Q14145 624 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 CRY2Q49AN0 593 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 ZNF585BQ52M93 769 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 C1orf141Q5JVX7 400 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 ARMC4Q5T2S8 1044 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 NDUFAF5Q5TEU4 345 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 FAM171BQ6P995 826 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 SPSB3Q6PJ21 355 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 PACS1Q6VY07 963 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 C16orf82Q7Z2V1 217 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 TMEM219Q86XT9 240 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 RBMXL3Q8N7X1 1067 aaKnown RBP3.77□□□□□ -1.81
SKP1-212ENST00000523966 MAB21L3Q8N8X9 362 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 ZNF441Q8N8Z8 693 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 OR10S1Q8NGN2 331 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 BBS10Q8TAM1 723 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 HDAC11Q96DB2 347 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 ABHD8Q96I13 439 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 FAM84BQ96KN1 310 aaPredicted RBP3.77□□□□□ -1.81
SKP1-212ENST00000523966 SPATA17Q96L03 361 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 TTC14Q96N46 770 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 IL17FQ96PD4 163 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 SEPHS2Q99611 448 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 SLX1AQ9BQ83 275 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 POLR3CQ9BUI4 534 aaPredicted RBP3.77□□□□□ -1.81
SKP1-212ENST00000523966 OR10A4Q9H209 315 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 PPIL3Q9H2H8 161 aaKnown RBP3.77□□□□□ -1.81
SKP1-212ENST00000523966 GOLPH3LQ9H4A5 285 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 RETREG1Q9H6L5 497 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 MIOSQ9NXC5 875 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 DPP3Q9NY33 737 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 KLHL9Q9P2J3 617 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 CRNNQ9UBG3 495 aaPredicted RBP3.77□□□□□ -1.81
SKP1-212ENST00000523966 RALYQ9UKM9 306 aaKnown RBP3.77□□□□□ -1.81
SKP1-212ENST00000523966 WBP11Q9Y2W2 641 aaKnown RBP3.77□□□□□ -1.81
SKP1-212ENST00000523966 GRIP1Q9Y3R0 1128 aa3.77□□□□□ -1.81
SKP1-212ENST00000523966 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.77□□□□□ -1.811e-16■■□□□ 11.8
SKP1-212ENST00000523966 A0A0B4J293 547 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 SRRM3A6NNA2 597 aaPredicted RBP3.76□□□□□ -1.81
SKP1-212ENST00000523966 ZNF587BE7ETH6 402 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 H7C0S8 307 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms