RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 TRIM48Q8IWZ4 208 aa17.49■□□□□ 0.39
CLK4-211ENST00000522556 OR6P1Q8NGX9 317 aa17.49■□□□□ 0.39
CLK4-211ENST00000522556 WDR36Q8NI36 951 aaKnown RBP17.49■□□□□ 0.39
CLK4-211ENST00000522556 LKAAEAR1Q8TD35 194 aa17.49■□□□□ 0.39
CLK4-211ENST00000522556 RSC1A1Q92681 617 aa17.49■□□□□ 0.39
CLK4-211ENST00000522556 CRELD1Q96HD1 420 aa17.49■□□□□ 0.39
CLK4-211ENST00000522556 LINC00615Q96LM1 132 aaPredicted RBP17.49■□□□□ 0.39
CLK4-211ENST00000522556 TMEM74Q96NL1 305 aa17.49■□□□□ 0.39
CLK4-211ENST00000522556 INSM2Q96T92 566 aaPredicted RBP17.49■□□□□ 0.39
CLK4-211ENST00000522556 ZMYND15Q9H091 742 aa17.49■□□□□ 0.39
CLK4-211ENST00000522556 IL1RAPL1Q9NZN1 696 aa17.49■□□□□ 0.39
CLK4-211ENST00000522556 LOXL2Q9Y4K0 774 aa17.49■□□□□ 0.39
CLK4-211ENST00000522556 DNMT3AQ9Y6K1 912 aaPredicted RBP17.49■□□□□ 0.39
CLK4-211ENST00000522556 CACNA1BQ00975 2339 aa17.49■□□□□ 0.39
CLK4-211ENST00000522556 GOLGA6L10A0A0M3HER8 536 aa17.48■□□□□ 0.39
CLK4-211ENST00000522556 LILRA5A6NI73 299 aa17.48■□□□□ 0.39
CLK4-211ENST00000522556 CFAP99D6REC4 459 aa17.48■□□□□ 0.39
CLK4-211ENST00000522556 GOLGA8KD6RF30 607 aa17.48■□□□□ 0.39
CLK4-211ENST00000522556 GOLGA8TH3BQL2 631 aa17.48■□□□□ 0.39
CLK4-211ENST00000522556 PLD2O14939 933 aa17.48■□□□□ 0.39
CLK4-211ENST00000522556 DXOO77932 396 aaKnown RBP17.48■□□□□ 0.39
CLK4-211ENST00000522556 TNFSF15O95150 251 aa17.48■□□□□ 0.39
CLK4-211ENST00000522556 THRAP10827 490 aa17.48■□□□□ 0.39
CLK4-211ENST00000522556 RALBP11234 206 aa17.48■□□□□ 0.39
CLK4-211ENST00000522556 CCL4P13236 92 aa17.48■□□□□ 0.39
CLK4-211ENST00000522556 PDHA2P29803 388 aa17.48■□□□□ 0.39
CLK4-211ENST00000522556 LIMK2P53671 638 aa17.48■□□□□ 0.39
CLK4-211ENST00000522556 KLHL7Q8IXQ5 586 aa17.48■□□□□ 0.39
CLK4-211ENST00000522556 CFAP206Q8IYR0 622 aa17.48■□□□□ 0.39
CLK4-211ENST00000522556 FBXO39Q8N4B4 442 aa17.48■□□□□ 0.39
CLK4-211ENST00000522556 OR4L1Q8NH43 312 aa17.48■□□□□ 0.39
CLK4-211ENST00000522556 OR10G6Q8NH81 332 aa17.48■□□□□ 0.39
CLK4-211ENST00000522556 HM13Q8TCT9 377 aa17.48■□□□□ 0.39
CLK4-211ENST00000522556 NCSTNQ92542 709 aa17.48■□□□□ 0.39
CLK4-211ENST00000522556 CXorf40BQ96DE9 158 aa17.48■□□□□ 0.39
CLK4-211ENST00000522556 NAF1Q96HR8 494 aaKnown RBP17.48■□□□□ 0.39
CLK4-211ENST00000522556 ZNF514Q96K75 400 aaPredicted RBP17.48■□□□□ 0.39
CLK4-211ENST00000522556 IL22Q9GZX6 179 aa17.48■□□□□ 0.39
CLK4-211ENST00000522556 STN1Q9H668 368 aaKnown RBP17.48■□□□□ 0.39
CLK4-211ENST00000522556 COG4Q9H9E3 785 aa17.48■□□□□ 0.39
CLK4-211ENST00000522556 SLC40A1Q9NP59 571 aa17.48■□□□□ 0.39
CLK4-211ENST00000522556 POT1Q9NUX5 634 aa17.48■□□□□ 0.39
CLK4-211ENST00000522556 IMP3Q9NV31 184 aaKnown RBP17.48■□□□□ 0.39
CLK4-211ENST00000522556 BFARQ9NZS9 450 aa17.48■□□□□ 0.39
CLK4-211ENST00000522556 PISDQ9UG56 409 aa17.48■□□□□ 0.39
CLK4-211ENST00000522556 KLHL3Q9UH77 587 aa17.48■□□□□ 0.39
CLK4-211ENST00000522556 URB1O60287 2271 aaKnown RBP17.47■□□□□ 0.39
CLK4-211ENST00000522556 CTAGE9A4FU28 777 aa17.47■□□□□ 0.39
CLK4-211ENST00000522556 A8MU76 341 aa17.47■□□□□ 0.39
CLK4-211ENST00000522556 CDRT15L2A8MXV6 281 aa17.47■□□□□ 0.39
CLK4-211ENST00000522556 DUX1O43812 170 aa17.47■□□□□ 0.39
CLK4-211ENST00000522556 BANF1O75531 89 aa17.47■□□□□ 0.39
CLK4-211ENST00000522556 MTHFD1P11586 935 aaKnown RBP17.47■□□□□ 0.39
CLK4-211ENST00000522556 ITGB6P18564 788 aa17.47■□□□□ 0.39
CLK4-211ENST00000522556 ITPKBP27987 946 aa17.47■□□□□ 0.39
CLK4-211ENST00000522556 NPY2RP49146 381 aa17.47■□□□□ 0.39
CLK4-211ENST00000522556 PRAMEP78395 509 aa17.47■□□□□ 0.39
CLK4-211ENST00000522556 GPLD1P80108 840 aa17.47■□□□□ 0.39
CLK4-211ENST00000522556 MRPS25P82663 173 aaKnown RBP17.47■□□□□ 0.39
CLK4-211ENST00000522556 SQSTM1Q13501 440 aa17.47■□□□□ 0.39
CLK4-211ENST00000522556 C19orf48Q6RUI8 117 aa17.47■□□□□ 0.39
CLK4-211ENST00000522556 PACS1Q6VY07 963 aa17.47■□□□□ 0.39
CLK4-211ENST00000522556 SPNS2Q8IVW8 549 aa17.47■□□□□ 0.39
CLK4-211ENST00000522556 NAT8LQ8N9F0 302 aa17.47■□□□□ 0.39
CLK4-211ENST00000522556 OR4D9Q8NGE8 314 aa17.47■□□□□ 0.39
CLK4-211ENST00000522556 GRAMD1AQ96CP6 724 aa17.47■□□□□ 0.39
CLK4-211ENST00000522556 AHCYL2Q96HN2 611 aaKnown RBP17.47■□□□□ 0.39
CLK4-211ENST00000522556 C12orf66Q96MD2 445 aa17.47■□□□□ 0.39
CLK4-211ENST00000522556 SLC46A1Q96NT5 459 aa17.47■□□□□ 0.39
CLK4-211ENST00000522556 SERPINB12Q96P63 405 aa17.47■□□□□ 0.39
CLK4-211ENST00000522556 TRIM51Q9BSJ1 452 aa17.47■□□□□ 0.39
CLK4-211ENST00000522556 KIFC1Q9BW19 673 aa17.47■□□□□ 0.39
CLK4-211ENST00000522556 STRADBQ9C0K7 418 aa17.47■□□□□ 0.39
CLK4-211ENST00000522556 KCND1Q9NSA2 647 aa17.47■□□□□ 0.39
CLK4-211ENST00000522556 SOX13Q9UN79 622 aa17.47■□□□□ 0.39
CLK4-211ENST00000522556 PCDHGA8Q9Y5G5 932 aa17.47■□□□□ 0.39
CLK4-211ENST00000522556 SAR1BQ9Y6B6 198 aa17.47■□□□□ 0.39
CLK4-211ENST00000522556 PKD1L2Q7Z442 2459 aa17.46■□□□□ 0.39
CLK4-211ENST00000522556 IQCF5A8MTL0 148 aa17.46■□□□□ 0.39
CLK4-211ENST00000522556 KCNJ13O60928 360 aa17.46■□□□□ 0.39
CLK4-211ENST00000522556 HALP42357 657 aa17.46■□□□□ 0.39
CLK4-211ENST00000522556 LEPRP48357 1165 aaKnown RBP17.46■□□□□ 0.39
CLK4-211ENST00000522556 EPHA4P54764 986 aa17.46■□□□□ 0.39
CLK4-211ENST00000522556 CDK16Q00536 496 aa17.46■□□□□ 0.39
CLK4-211ENST00000522556 PTK6Q13882 451 aa17.46■□□□□ 0.39
CLK4-211ENST00000522556 ITIH4Q14624 930 aa17.46■□□□□ 0.39
CLK4-211ENST00000522556 BRD3Q15059 726 aa17.46■□□□□ 0.39
CLK4-211ENST00000522556 PPP1R7Q15435 360 aa17.46■□□□□ 0.39
CLK4-211ENST00000522556 RNASEH2BQ5TBB1 312 aaKnown RBP17.46■□□□□ 0.39
CLK4-211ENST00000522556 CAPRIN2Q6IMN6 1127 aaKnown RBP17.46■□□□□ 0.39
CLK4-211ENST00000522556 TMEM71Q6P5X7 295 aa17.46■□□□□ 0.39
CLK4-211ENST00000522556 SNIP1Q8TAD8 396 aaKnown RBP17.46■□□□□ 0.39
CLK4-211ENST00000522556 SH3KBP1Q96B97 665 aa17.46■□□□□ 0.39
CLK4-211ENST00000522556 FCRL3Q96P31 734 aaPredicted RBP17.46■□□□□ 0.39
CLK4-211ENST00000522556 CCM2Q9BSQ5 444 aa17.46■□□□□ 0.39
CLK4-211ENST00000522556 OR52A5Q9H2C5 316 aa17.46■□□□□ 0.39
CLK4-211ENST00000522556 CATSPERZQ9NTU4 200 aa17.46■□□□□ 0.39
CLK4-211ENST00000522556 UBXN7O94888 489 aa17.45■□□□□ 0.38
CLK4-211ENST00000522556 VAPBO95292 243 aa17.45■□□□□ 0.38
CLK4-211ENST00000522556 IVDP26440 423 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms