RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 LIPAP38571 399 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 GDNFP39905 211 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 MAGEB1P43366 347 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 HAND2P61296 217 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 DMWDQ09019 674 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 ZBTB17Q13105 803 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 TNK1Q13470 666 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 USP10Q14694 798 aaKnown RBP3.96□□□□□ -1.78
SKP1-209ENST00000522552 KRT24Q2M2I5 525 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 ERCC6LQ2NKX8 1250 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 ZMAT1Q5H9K5 638 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 LRRC73Q5JTD7 316 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 LDLRAP1Q5SW96 308 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 GCNT6Q5T4J0 391 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 ANXA8L1Q5VT79 327 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 METRNLQ641Q3 311 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 SLFN13Q68D06 897 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 FBXO46Q6PJ61 603 aaPredicted RBP3.96□□□□□ -1.78
SKP1-209ENST00000522552 FAM198BQ6UWH4 519 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 B3GNT8Q7Z7M8 397 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 RTN4RL2Q86UN3 420 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 TMEM173Q86WV6 379 aaPredicted RBP3.96□□□□□ -1.78
SKP1-209ENST00000522552 TMPRSS6Q8IU80 811 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 ZCCHC9Q8N567 271 aaKnown RBP3.96□□□□□ -1.78
SKP1-209ENST00000522552 LINC00482Q8N8I6 264 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 SPERTQ8NA61 448 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 FAM184AQ8NB25 1140 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 BBOF1Q8ND07 529 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 OR56B1Q8NGI3 324 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 GPT2Q8TD30 523 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 TMEM170AQ8WVE7 144 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 LENG9Q96B70 501 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 R3HDM4Q96D70 268 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 MSI2Q96DH6 328 aaKnown RBP3.96□□□□□ -1.78
SKP1-209ENST00000522552 PHF21BQ96EK2 531 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 OTUB1Q96FW1 271 aaPredicted RBP3.96□□□□□ -1.78
SKP1-209ENST00000522552 EGLN2Q96KS0 407 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 MS4A10Q96PG2 267 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 PRR25Q96S07 402 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 ZSWIM1Q9BR11 485 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 PIGQQ9BRB3 760 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 CPPED1Q9BRF8 314 aaPredicted RBP3.96□□□□□ -1.78
SKP1-209ENST00000522552 GTPBP2Q9BX10 602 aaKnown RBP3.96□□□□□ -1.78
SKP1-209ENST00000522552 AMBRA1Q9C0C7 1298 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 VCX2Q9H322 139 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 BPIFA1Q9NP55 256 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 GRHL1Q9NZI5 618 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 MGAT4CQ9UBM8 478 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 TEKT2Q9UIF3 430 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 GPR132Q9UNW8 380 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 DLGAP4Q9Y2H0 992 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 ZDHHC9Q9Y397 364 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 MFHAS1Q9Y4C4 1052 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 CLIC4Q9Y696 253 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 ZNF541Q9H0D2 1346 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 A0A1W2PS29 197 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 H0Y8G0 127 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 CLDN4O14493 209 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 PTGESO14684 152 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 CASC3O15234 703 aaKnown RBP3.95□□□□□ -1.78
SKP1-209ENST00000522552 TOM1L1O75674 476 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 RHBDL1O75783 438 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 CIB2O75838 187 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 STAMBPO95630 424 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 C1RP00736 705 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 PRNPP04156 253 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 PLA2G4BP0C869 781 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 CALCBP10092 127 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 CLUP10909 449 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 ZNF28P17035 718 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 NDUFS1P28331 727 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 EPHB2P29323 1055 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 HSD17B2P37059 387 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 ZNF75DP51815 510 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 ACTR3P61158 418 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 PPP2R2BQ00005 443 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 DOC2AQ14183 400 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 RCN1Q15293 331 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 CYP1B1Q16678 543 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 PFKFB3Q16875 520 aaPredicted RBP3.95□□□□□ -1.78
SKP1-209ENST00000522552 SOWAHAQ2M3V2 549 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 SLC36A3Q495N2 470 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 TDRD12Q587J7 1177 aaKnown RBP3.95□□□□□ -1.78
SKP1-209ENST00000522552 TCTE1Q5JU00 501 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 PRR31Q5SQ13 230 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.95□□□□□ -1.78
SKP1-209ENST00000522552 ARHGEF16Q5VV41 709 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 DCAF12L2Q5VW00 463 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 MIS18BP1Q6P0N0 1132 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 PMF1Q6P1K2 205 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 FBXO42Q6P3S6 717 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 PAPD4Q6PIY7 484 aaKnown RBP3.95□□□□□ -1.78
SKP1-209ENST00000522552 B3GNT6Q6ZMB0 384 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 MAVSQ7Z434 540 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 NOXA1Q86UR1 476 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 CADM3Q8N126 398 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 ANKRD13CQ8N6S4 541 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 ZNF321PQ8N8H1 164 aa3.95□□□□□ -1.78
SKP1-209ENST00000522552 GBP7Q8N8V2 638 aaPredicted RBP3.95□□□□□ -1.78
SKP1-209ENST00000522552 AMER3Q8N944 861 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms