RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 VPS18Q9P253 973 aa8.66□□□□□ -1.02
TRAPPC9-212ENST00000521944 SUCOQ9UBS9 1254 aaKnown RBP8.66□□□□□ -1.02
TRAPPC9-212ENST00000521944 PCM1Q15154 2024 aa8.66□□□□□ -1.02
TRAPPC9-212ENST00000521944 OR52A4PA6NMU1 304 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 GOLGA8SH3BPF8 625 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 PSMD11O00231 422 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 CREB3O43889 395 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 CNOT3O75175 753 aaKnown RBP8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 PALMO75781 387 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 ASMTLO95671 621 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 VIPP01282 170 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 PNMA6AP0CW24 399 aaPredicted RBP8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 FOSL1P15407 271 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 PCSK2P16519 638 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 CMA1P23946 247 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 MST1P26927 711 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 EPHB2P29323 1055 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 CDH5P33151 784 aaPredicted RBP8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 USP8P40818 1118 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 GSDMDP57764 484 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 SSPNQ14714 243 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 CDO1Q16878 200 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 C8orf34Q49A92 452 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 B3GNTL1Q67FW5 361 aaPredicted RBP8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 ALKBH2Q6NS38 261 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 FBXO38Q6PIJ6 1188 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 NCCRP1Q6ZVX7 275 aaPredicted RBP8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 ARCQ7LC44 396 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 PPP1R32Q7Z5V6 425 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 SYTL1Q8IYJ3 562 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 BCORP1Q8N888 145 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 GPT2Q8TD30 523 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 NR4A3Q92570 626 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 C18orf8Q96DM3 657 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 CELF6Q96J87 481 aaKnown RBP8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 FER1L6-AS2Q96M78 137 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 RIOK2Q9BVS4 552 aaKnown RBP8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 SLC39A8Q9C0K1 460 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 KLC4Q9NSK0 619 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 SH3BGRL2Q9UJC5 107 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 RCOR1Q9UKL0 485 aa8.65□□□□□ -1.02
TRAPPC9-212ENST00000521944 GTF3C1Q12789 2109 aa8.65□□□□□ -1.03
TRAPPC9-212ENST00000521944 FAM237AA0A1B0GTK4 181 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 FADS2P1A8MWK0 482 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 LDB2O43679 373 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 NUAK1O60285 661 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 ALOX12BO75342 701 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 CLDN14O95500 239 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 C8BP07358 591 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 SLC2A4P14672 509 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 ZNF8P17098 575 aaPredicted RBP8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 CTPS1P17812 591 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 PAPOLAP51003 745 aaKnown RBP8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 NDUFA8P51970 172 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 HSD11B2P80365 405 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 TRAF2Q12933 501 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 IHHQ14623 411 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 COBLL1Q53SF7 1204 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 ZNF648Q5T619 568 aaPredicted RBP8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 LRRC66Q68CR7 880 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 FCRL6Q6DN72 434 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 RPUSD3Q6P087 351 aaKnown RBP8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 CYB5D1Q6P9G0 228 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 FAM180AQ6UWF9 173 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 TMEM207Q6UWW9 146 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 GFRALQ6UXV0 394 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 LINC00114Q6XXX2 140 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 TAOK1Q7L7X3 1001 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 RAB43Q86YS6 212 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 PGBD5Q8N414 524 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 AVL9Q8NBF6 648 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 EXD1Q8NHP7 514 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 PIH1D2Q8WWB5 315 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 RXFP2Q8WXD0 754 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 FOXD4L4Q8WXT5 416 aaPredicted RBP8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 CNDP1Q96KN2 507 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 CCM2LQ9NUG4 571 aaPredicted RBP8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 DNAJB12Q9NXW2 375 aaKnown RBP8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 DTLQ9NZJ0 730 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 ATXN10Q9UBB4 475 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 WDR37Q9Y2I8 494 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 PPIL1Q9Y3C6 166 aa8.64□□□□□ -1.03
TRAPPC9-212ENST00000521944 SASH3O75995 380 aa8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 UNC5CO95185 931 aa8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 UMODP07911 640 aa8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 PDHA1P08559 390 aa8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 IGFBP2P18065 325 aa8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 RPL10P27635 214 aaKnown RBP8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 KRT9P35527 623 aa8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 HADHAP40939 763 aa8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 SNX16P57768 344 aa8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 AP1S1P61966 158 aa8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 ADAM8P78325 824 aa8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 SLC10A7Q0GE19 358 aa8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 CETN1Q12798 172 aa8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 PRKD1Q15139 912 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 SEPT7Q16181 437 aaKnown RBP8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 C3AR1Q16581 482 aa8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 MTFR2Q6P444 385 aa8.63□□□□□ -1.03
TRAPPC9-212ENST00000521944 ABRAXAS1Q6UWZ7 409 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms