RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 PITPNM1O00562 1244 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 KLHL18O94889 574 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 MTHFRP42898 656 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 PNLIPRP1P54315 467 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 CNPY1Q3B7I2 92 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 ZNF572Q7Z3I7 529 aaPredicted RBP16.01■□□□□ 0.15
USP42-207ENST00000521713 ITCHQ96J02 903 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 PANX1Q96RD7 426 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 ABCG8Q9H221 673 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 FKBPLQ9UIM3 349 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 GABRDO14764 452 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 UGT2B11O75310 529 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 GOT2P00505 430 aaKnown RBP16.01■□□□□ 0.15
USP42-207ENST00000521713 ITPKAP23677 461 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 CAPGP40121 348 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 NOVP48745 357 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 NAE1Q13564 534 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 TMPRSS11BQ86T26 416 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 PGAM4Q8N0Y7 254 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 NMUR2Q9GZQ4 415 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 IL23AQ9NPF7 189 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 DHFRP00374 187 aa16■□□□□ 0.15
USP42-207ENST00000521713 IQCF3P0C7M6 154 aa16■□□□□ 0.15
USP42-207ENST00000521713 KLF10Q13118 480 aa16■□□□□ 0.15
USP42-207ENST00000521713 SEMA5AQ13591 1074 aa16■□□□□ 0.15
USP42-207ENST00000521713 ZIK1Q3SY52 487 aaPredicted RBP16■□□□□ 0.15
USP42-207ENST00000521713 PYDC2Q56P42 97 aa16■□□□□ 0.15
USP42-207ENST00000521713 ESRP1Q6NXG1 681 aaKnown RBP16■□□□□ 0.15
USP42-207ENST00000521713 AMIGO2Q86SJ2 522 aa16■□□□□ 0.15
USP42-207ENST00000521713 HIPK1Q86Z02 1210 aa16■□□□□ 0.15
USP42-207ENST00000521713 DPEP2Q9H4A9 486 aa16■□□□□ 0.15
USP42-207ENST00000521713 INTS10Q9NVR2 710 aaKnown RBP16■□□□□ 0.15
USP42-207ENST00000521713 SALL4Q9UJQ4 1053 aa16■□□□□ 0.15
USP42-207ENST00000521713 PLLPQ9Y342 182 aa16■□□□□ 0.15
USP42-207ENST00000521713 A0A1W2PPM1 405 aa16■□□□□ 0.15
USP42-207ENST00000521713 GNPDA1P46926 289 aa16■□□□□ 0.15
USP42-207ENST00000521713 C2orf27AQ580R0 203 aa16■□□□□ 0.15
USP42-207ENST00000521713 PLET1Q6UQ28 207 aa16■□□□□ 0.15
USP42-207ENST00000521713 ARHGAP36Q6ZRI8 547 aa16■□□□□ 0.15
USP42-207ENST00000521713 CMTR2Q8IYT2 770 aaKnown RBP16■□□□□ 0.15
USP42-207ENST00000521713 CNTD1Q8N815 330 aa16■□□□□ 0.15
USP42-207ENST00000521713 CCDC177Q9NQR7 707 aaPredicted RBP16■□□□□ 0.15
USP42-207ENST00000521713 SIX4Q9UIU6 781 aa16■□□□□ 0.15
USP42-207ENST00000521713 SSR3Q9UNL2 185 aa16■□□□□ 0.15
USP42-207ENST00000521713 RHPN2P1A8MT19 583 aa16■□□□□ 0.15
USP42-207ENST00000521713 AGRPO00253 132 aa16■□□□□ 0.15
USP42-207ENST00000521713 ERN1O75460 977 aaKnown RBP16■□□□□ 0.15
USP42-207ENST00000521713 CST1P01037 141 aa16■□□□□ 0.15
USP42-207ENST00000521713 IDH2P48735 452 aaKnown RBP16■□□□□ 0.15
USP42-207ENST00000521713 LBX1P52954 281 aa16■□□□□ 0.15
USP42-207ENST00000521713 ACAP2Q15057 778 aa16■□□□□ 0.15
USP42-207ENST00000521713 TOMM20Q15388 145 aa16■□□□□ 0.15
USP42-207ENST00000521713 TNFAIP8L3Q5GJ75 292 aa16■□□□□ 0.15
USP42-207ENST00000521713 BRAT1Q6PJG6 821 aa16■□□□□ 0.15
USP42-207ENST00000521713 TMEM220Q6QAJ8 160 aa16■□□□□ 0.15
USP42-207ENST00000521713 GDPD4Q6W3E5 623 aa16■□□□□ 0.15
USP42-207ENST00000521713 POMGNT2Q8NAT1 580 aa16■□□□□ 0.15
USP42-207ENST00000521713 LCN9Q8WX39 176 aa16■□□□□ 0.15
USP42-207ENST00000521713 OTUB2Q96DC9 234 aa16■□□□□ 0.15
USP42-207ENST00000521713 PCBD2Q9H0N5 130 aa16■□□□□ 0.15
USP42-207ENST00000521713 VRTNQ9H8Y1 702 aa16■□□□□ 0.15
USP42-207ENST00000521713 KLHL1Q9NR64 748 aa16■□□□□ 0.15
USP42-207ENST00000521713 COMMD9Q9P000 198 aa16■□□□□ 0.15
USP42-207ENST00000521713 CD84Q9UIB8 345 aa16■□□□□ 0.15
USP42-207ENST00000521713 ADAMTS5Q9UNA0 930 aa16■□□□□ 0.15
USP42-207ENST00000521713 HEBP2Q9Y5Z4 205 aa16■□□□□ 0.15
USP42-207ENST00000521713 ARFGEF2Q9Y6D5 1785 aa16■□□□□ 0.15
USP42-207ENST00000521713 RFXANKO14593 260 aa16■□□□□ 0.15
USP42-207ENST00000521713 SERPINB7O75635 380 aa16■□□□□ 0.15
USP42-207ENST00000521713 CSF2RAP15509 400 aa16■□□□□ 0.15
USP42-207ENST00000521713 ASMTP46597 345 aa16■□□□□ 0.15
USP42-207ENST00000521713 ACADVLP49748 655 aa16■□□□□ 0.15
USP42-207ENST00000521713 SNAP47Q5SQN1 464 aa16■□□□□ 0.15
USP42-207ENST00000521713 MSANTD2Q6P1R3 559 aa16■□□□□ 0.15
USP42-207ENST00000521713 HM13Q8TCT9 377 aa16■□□□□ 0.15
USP42-207ENST00000521713 SPOCK2Q92563 424 aa16■□□□□ 0.15
USP42-207ENST00000521713 SIPA1Q96FS4 1042 aa16■□□□□ 0.15
USP42-207ENST00000521713 ZBED3Q96IU2 234 aaPredicted RBP16■□□□□ 0.15
USP42-207ENST00000521713 MFHAS1Q9Y4C4 1052 aa16■□□□□ 0.15
USP42-207ENST00000521713 IRGMA1A4Y4 181 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 LOC110117498-PIK3R3F6TDL0 507 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 H3BNH8 94 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 WNT9AO14904 365 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 HIST1H2ABP04908 130 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 C8GP07360 202 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 LINC00032P0C843 101 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 CYBAP13498 195 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 PUDPQ08623 228 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 LIN54Q6MZP7 749 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 HIST3H2AQ7L7L0 130 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 THAP5Q7Z6K1 395 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 GATAD2AQ86YP4 633 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 UXS1Q8NBZ7 420 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 HIST1H2ACQ93077 130 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 SMOQ99835 787 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 SEMA3GQ9NS98 782 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 MRTO4Q9UKD2 239 aaKnown RBP15.99■□□□□ 0.15
USP42-207ENST00000521713 SLC9A8Q9Y2E8 581 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 C4BP0C0L5 1744 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 SSNA1O43805 119 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms