RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 RNF224P0DH78 156 aa11.23□□□□□ -0.61
MRPS28-206ENST00000520946 MTHFD1P11586 935 aaKnown RBP11.23□□□□□ -0.61
MRPS28-206ENST00000520946 MSH3P20585 1137 aa11.23□□□□□ -0.61
MRPS28-206ENST00000520946 AKT1P31749 480 aa11.23□□□□□ -0.61
MRPS28-206ENST00000520946 OTX2P32243 289 aa11.23□□□□□ -0.61
MRPS28-206ENST00000520946 PREPP48147 710 aa11.23□□□□□ -0.61
MRPS28-206ENST00000520946 GLRBP48167 497 aa11.23□□□□□ -0.61
MRPS28-206ENST00000520946 ATP13A5Q4VNC0 1218 aa11.23□□□□□ -0.61
MRPS28-206ENST00000520946 TMEM220Q6QAJ8 160 aa11.23□□□□□ -0.61
MRPS28-206ENST00000520946 EID2BQ96D98 161 aa11.23□□□□□ -0.61
MRPS28-206ENST00000520946 SNRNP40Q96DI7 357 aaKnown RBP11.23□□□□□ -0.61
MRPS28-206ENST00000520946 FER1L6-AS2Q96M78 137 aa11.23□□□□□ -0.61
MRPS28-206ENST00000520946 C12orf66Q96MD2 445 aa11.23□□□□□ -0.61
MRPS28-206ENST00000520946 VPS35Q96QK1 796 aa11.23□□□□□ -0.61
MRPS28-206ENST00000520946 NUDT9Q9BW91 350 aa11.23□□□□□ -0.61
MRPS28-206ENST00000520946 CEP41Q9BYV8 373 aa11.23□□□□□ -0.61
MRPS28-206ENST00000520946 ACTR5Q9H9F9 607 aaPredicted RBP11.23□□□□□ -0.61
MRPS28-206ENST00000520946 RTN4Q9NQC3 1192 aaKnown RBP11.23□□□□□ -0.61
MRPS28-206ENST00000520946 C5AR2Q9P296 337 aa11.23□□□□□ -0.61
MRPS28-206ENST00000520946 FAM8A1Q9UBU6 413 aa11.23□□□□□ -0.61
MRPS28-206ENST00000520946 ERRFI1Q9UJM3 462 aaPredicted RBP11.23□□□□□ -0.61
MRPS28-206ENST00000520946 PKP3Q9Y446 797 aa11.23□□□□□ -0.61
MRPS28-206ENST00000520946 COPG1Q9Y678 874 aaKnown RBP11.23□□□□□ -0.61
MRPS28-206ENST00000520946 DNMT3AQ9Y6K1 912 aaPredicted RBP11.23□□□□□ -0.61
MRPS28-206ENST00000520946 USP9XQ93008 2570 aaPredicted RBP11.23□□□□□ -0.61
MRPS28-206ENST00000520946 GSAPA4D1B5 854 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 TMEM150CB9EJG8 249 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 PPP1R12AO14974 1030 aaPredicted RBP11.22□□□□□ -0.61
MRPS28-206ENST00000520946 DDX3YO15523 660 aaKnown RBP11.22□□□□□ -0.61
MRPS28-206ENST00000520946 LDB2O43679 373 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 CEACAM4O75871 244 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 NDST3O95803 873 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 CLDN1O95832 211 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 SERPINC1P01008 464 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 LDLRP01130 860 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 IGHEP01854 428 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 POLR2CP19387 275 aaPredicted RBP11.22□□□□□ -0.61
MRPS28-206ENST00000520946 HLA-DPA1P20036 260 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 SPAM1P38567 509 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 ARCN1P48444 511 aaKnown RBP11.22□□□□□ -0.61
MRPS28-206ENST00000520946 ITGA1P56199 1179 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 PER3P56645 1201 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 IFI35P80217 286 aaPredicted RBP11.22□□□□□ -0.61
MRPS28-206ENST00000520946 PPIDQ08752 370 aaKnown RBP11.22□□□□□ -0.61
MRPS28-206ENST00000520946 ZBTB17Q13105 803 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 ITGA9Q13797 1035 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 NFE2L1Q14494 772 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 PDK1Q15118 436 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 LONRF2Q1L5Z9 754 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 KHDC1Q4VXA5 237 aaKnown RBP11.22□□□□□ -0.61
MRPS28-206ENST00000520946 PLEKHS1Q5SXH7 462 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 VWA5B1Q5TIE3 1220 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 GPR135Q8IZ08 494 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 DSELQ8IZU8 1212 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 CARFQ8N187 725 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 ZADH2Q8N4Q0 377 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 RBMXL3Q8N7X1 1067 aaKnown RBP11.22□□□□□ -0.61
MRPS28-206ENST00000520946 OR4E2Q8NGC2 313 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 GPR150Q8NGU9 434 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 FAM71BQ8TC56 605 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 C19orf60Q96EN9 201 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 IMP4Q96G21 291 aaKnown RBP11.22□□□□□ -0.61
MRPS28-206ENST00000520946 LRFN5Q96NI6 719 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 IP6K3Q96PC2 410 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 TLR10Q9BXR5 811 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 SLC25A51Q9H1U9 297 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 TRABDQ9H4I3 376 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 RUBCNLQ9H714 662 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 SYTL2Q9HCH5 934 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 LATS2Q9NRM7 1088 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 AGPAT4Q9NRZ5 378 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 ASF1BQ9NVP2 202 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 SEMA5BQ9P283 1151 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 NFKBIL1Q9UBC1 381 aaPredicted RBP11.22□□□□□ -0.61
MRPS28-206ENST00000520946 LCMT1Q9UIC8 334 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 B3GNT3Q9Y2A9 372 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 BSNQ9UPA5 3926 aa11.22□□□□□ -0.61
MRPS28-206ENST00000520946 A0A0A6YYK5 440 aaPredicted RBP11.21□□□□□ -0.61
MRPS28-206ENST00000520946 LRRD1A4D1F6 860 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 SLC9B1P1A6NJY1 282 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 GOLGA6L22H0YM25 854 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 MATN2O00339 956 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 APOL1O14791 398 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 IPO13O94829 963 aaKnown RBP11.21□□□□□ -0.61
MRPS28-206ENST00000520946 CYP1A2P05177 515 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 HBQ1P09105 142 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 NDUFS1P28331 727 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 TNFRSF8P28908 595 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 SLC10A2Q12908 348 aaPredicted RBP11.21□□□□□ -0.61
MRPS28-206ENST00000520946 ATP1A4Q13733 1029 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 PLEKHN1Q494U1 663 aaPredicted RBP11.21□□□□□ -0.61
MRPS28-206ENST00000520946 FNBP1LQ5T0N5 605 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 PRAMEF17Q5VTA0 474 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 MLIPQ5VWP3 458 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 ZNF449Q6P9G9 518 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 FBXO38Q6PIJ6 1188 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 FAM151BQ6UXP7 276 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 DET1Q7L5Y6 550 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 SYTL1Q8IYJ3 562 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 RASGEF1AQ8N9B8 481 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms