RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 COASYQ13057 564 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 CUL4AQ13619 759 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 ACVR2BQ13705 512 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 MVPQ14764 893 aaKnown RBP3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 MEA1Q16626 185 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 SYT16Q17RD7 645 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 ZNF280DQ6N043 979 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 ZNF704Q6ZNC4 412 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 TUBA1AQ71U36 451 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 PCGF5Q86SE9 256 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 SDCCAG8Q86SQ7 713 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 EXOC3L1Q86VI1 746 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 C1orf87Q8N0U7 546 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 HJURPQ8NCD3 748 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 SMRP1Q8NCR6 262 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 LNX1Q8TBB1 728 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 HM13Q8TCT9 377 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 PIGTQ969N2 578 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 RHBDF1Q96CC6 855 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 ELMOD3Q96FG2 381 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 CTAGE1Q96RT6 745 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 TUBA1CQ9BQE3 449 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 PIGMQ9H3S5 423 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 FKRPQ9H9S5 495 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 CGNQ9P2M7 1197 aaKnown RBP3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 DBNLQ9UJU6 430 aaKnown RBP3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 POU2F3Q9UKI9 436 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 ZNF215Q9UL58 517 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 GPR34Q9UPC5 381 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 EXO1Q9UQ84 846 aaKnown RBP3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 TMEM184BQ9Y519 407 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 LRP12Q9Y561 859 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 ARHGEF40Q8TER5 1519 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 PIK3C2BO00750 1634 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 ABCA6Q8N139 1617 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 KIF1BO60333 1816 aa3.21□□□□□ -1.89
HMGB1P41-201ENST00000520234 PPIP5K1Q6PFW1 1433 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 TPPPO94811 219 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 AFPP02771 609 aaKnown RBP3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 ANXA7P20073 488 aaKnown RBP3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 CORO1AP31146 461 aaKnown RBP3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 MSH2P43246 934 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 NLRP5P59047 1200 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 MRPS5P82675 430 aaKnown RBP3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 EEF1A2Q05639 463 aaKnown RBP3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 NCBP1Q09161 790 aaKnown RBP3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 TROAPQ12815 778 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 EPS8Q12929 822 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 CDC16Q13042 620 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 ZBTB17Q13105 803 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 CHAF1BQ13112 559 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 ZNF234Q14588 700 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 WTAPQ15007 396 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 TMEM35AQ53FP2 167 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 RAB41Q5JT25 222 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 WDR78Q5VTH9 848 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 NSUN5P2Q63ZY6 315 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 KIAA0930Q6ICG6 404 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 WBP2NLQ6ICG8 309 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 GFRALQ6UXV0 394 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 TPRG1Q6ZUI0 275 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 KRTAP5-2Q701N4 177 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 CCDC190Q86UF4 302 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 SATL1Q86VE3 508 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 KMT5CQ86Y97 462 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 ARID3BQ8IVW6 561 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 NAGSQ8N159 534 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 MUC20Q8N307 709 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 GCSAMQ8N6F7 178 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 EMC1Q8N766 993 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 SLC38A9Q8NBW4 561 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 OR5R1Q8NH85 324 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 DUSP19Q8WTR2 217 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 SORCS1Q8WY21 1168 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 DACH2Q96NX9 599 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 UBXN6Q9BZV1 441 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 TSPYL1Q9H0U9 437 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 CCDC68Q9H2F9 335 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 TRMT1Q9NXH9 659 aaKnown RBP3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 MAP3K20Q9NYL2 800 aaKnown RBP3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 SUCLA2Q9P2R7 463 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 DDX19BQ9UMR2 479 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 KLHL20Q9Y2M5 609 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 KIF3AQ9Y496 699 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 PCDHAC2Q9Y5I4 1007 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 KIF24Q5T7B8 1368 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 UGGT1Q9NYU2 1555 aa3.21□□□□□ -1.9
HMGB1P41-201ENST00000520234 PPLO60437 1756 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 NEXMIFQ5QGS0 1516 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 A0A1W2PS18 150 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 LRRC72A6NJI9 287 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 H3BQ06 376 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 BUD23O43709 281 aaKnown RBP3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 MITFO75030 526 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 KRT36O76013 467 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 CSH1P0DML2 217 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 CSH2P0DML3 217 aa3.2□□□□□ -1.9
HMGB1P41-201ENST00000520234 ZNF23P17027 643 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms