RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 CAMK1GQ96NX5 476 aa5.89□□□□□ -1.47
SQLE-203ENST00000518931 ZNF347Q96SE7 839 aa5.89□□□□□ -1.47
SQLE-203ENST00000518931 HNRNPABQ99729 332 aaKnown RBP5.89□□□□□ -1.47
SQLE-203ENST00000518931 SYT17Q9BSW7 474 aa5.89□□□□□ -1.47
SQLE-203ENST00000518931 KIFC3Q9BVG8 833 aa5.89□□□□□ -1.47
SQLE-203ENST00000518931 FAM129AQ9BZQ8 928 aa5.89□□□□□ -1.47
SQLE-203ENST00000518931 SPRTNQ9H040 489 aaPredicted RBP5.89□□□□□ -1.47
SQLE-203ENST00000518931 NSRP1Q9H0G5 558 aaKnown RBP5.89□□□□□ -1.47
SQLE-203ENST00000518931 SLC32A1Q9H598 525 aa5.89□□□□□ -1.47
SQLE-203ENST00000518931 GORASP2Q9H8Y8 452 aa5.89□□□□□ -1.47
SQLE-203ENST00000518931 SYTL2Q9HCH5 934 aa5.89□□□□□ -1.47
SQLE-203ENST00000518931 PCDHB16Q9NRJ7 776 aa5.89□□□□□ -1.47
SQLE-203ENST00000518931 TRNAU1APQ9NX07 287 aaKnown RBP5.89□□□□□ -1.47
SQLE-203ENST00000518931 CCPG1Q9ULG6 757 aa5.89□□□□□ -1.47
SQLE-203ENST00000518931 PTRH2Q9Y3E5 179 aaKnown RBP5.89□□□□□ -1.47
SQLE-203ENST00000518931 COPG1Q9Y678 874 aaKnown RBP5.89□□□□□ -1.47
SQLE-203ENST00000518931 UQCRHLA0A096LP55 91 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 FAM47DPA6NHR8 397 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 FAM90A20PA6NIJ5 464 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 CCDC188H7C350 402 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 KCNK5O95279 499 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 POP4O95707 220 aaKnown RBP5.88□□□□□ -1.47
SQLE-203ENST00000518931 DDAH2O95865 285 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 KRT8P05787 483 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 UQCRHP07919 91 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 FGF4P08620 206 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 WEE2P0C1S8 567 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 CYP19A1P11511 503 aaPredicted RBP5.88□□□□□ -1.47
SQLE-203ENST00000518931 PCNAP12004 261 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 KRT3P12035 628 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 TGM2P21980 687 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 CHRNA3P32297 505 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 BMI1P35226 326 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 WNT5AP41221 380 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 FASLGP48023 281 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 RAB28P51157 221 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 TFAP4Q01664 338 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 TDGQ13569 410 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 HNRNPDQ14103 355 aaKnown RBP5.88□□□□□ -1.47
SQLE-203ENST00000518931 ETFDHQ16134 617 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 ZNF484Q5JVG2 852 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 PAPD7Q5XG87 772 aaKnown RBP5.88□□□□□ -1.47
SQLE-203ENST00000518931 NEK5Q6P3R8 708 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 ZNF474Q6S9Z5 364 aaPredicted RBP5.88□□□□□ -1.47
SQLE-203ENST00000518931 FAM57BQ71RH2 274 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 PHC2Q8IXK0 858 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 ELMOD2Q8IZ81 293 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 FAM185AQ8N0U4 392 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 MINDY1Q8N5J2 469 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 BANPQ8N9N5 519 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 IL17RCQ8NAC3 791 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 IGFBPL1Q8WX77 278 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 SMARCE1Q969G3 411 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 FAM149B1Q96BN6 582 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 HDAC11Q96DB2 347 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 LRRC39Q96DD0 335 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 C14orf79Q96F83 325 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 RBM17Q96I25 401 aaKnown RBP5.88□□□□□ -1.47
SQLE-203ENST00000518931 PKP2Q99959 881 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 UQCC2Q9BRT2 126 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 PIMREGQ9BSJ6 248 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 TPPP3Q9BW30 176 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 POLR1EQ9GZS1 481 aaKnown RBP5.88□□□□□ -1.47
SQLE-203ENST00000518931 TRPV6Q9H1D0 765 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 VCX3BQ9H321 246 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 MOV10Q9HCE1 1003 aaKnown RBP5.88□□□□□ -1.47
SQLE-203ENST00000518931 SEMA4BQ9NPR2 832 aaPredicted RBP5.88□□□□□ -1.47
SQLE-203ENST00000518931 PRMT8Q9NR22 394 aaPredicted RBP5.88□□□□□ -1.47
SQLE-203ENST00000518931 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.88□□□□□ -1.47
SQLE-203ENST00000518931 TUBA8Q9NY65 449 aaPredicted RBP5.88□□□□□ -1.47
SQLE-203ENST00000518931 MTRF1LQ9UGC7 380 aaKnown RBP5.88□□□□□ -1.47
SQLE-203ENST00000518931 CDH22Q9UJ99 828 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 COMMD3-BMI1R4GMX3 469 aa5.88□□□□□ -1.47
SQLE-203ENST00000518931 OR2A25A4D2G3 310 aa5.87□□□□□ -1.47
SQLE-203ENST00000518931 HTR3EA5X5Y0 456 aa5.87□□□□□ -1.47
SQLE-203ENST00000518931 MBD3L5A6NJ08 208 aaPredicted RBP5.87□□□□□ -1.47
SQLE-203ENST00000518931 CDRT15L2A8MXV6 281 aa5.87□□□□□ -1.47
SQLE-203ENST00000518931 A8MZ25 164 aa5.87□□□□□ -1.47
SQLE-203ENST00000518931 H0YHG0 523 aa5.87□□□□□ -1.47
SQLE-203ENST00000518931 PPEF2O14830 753 aa5.87□□□□□ -1.47
SQLE-203ENST00000518931 NVLO15381 856 aaKnown RBP5.87□□□□□ -1.47
SQLE-203ENST00000518931 GPRIN2O60269 458 aa5.87□□□□□ -1.47
SQLE-203ENST00000518931 UGDHO60701 494 aa5.87□□□□□ -1.47
SQLE-203ENST00000518931 MTX2O75431 263 aa5.87□□□□□ -1.47
SQLE-203ENST00000518931 TOP3BO95985 862 aaKnown RBP5.87□□□□□ -1.47
SQLE-203ENST00000518931 MT-ATP6P00846 226 aa5.87□□□□□ -1.47
SQLE-203ENST00000518931 PDGFBP01127 241 aaPredicted RBP5.87□□□□□ -1.47
SQLE-203ENST00000518931 PENKP01210 267 aaPredicted RBP5.87□□□□□ -1.47
SQLE-203ENST00000518931 IL1AP01583 271 aa5.87□□□□□ -1.47
SQLE-203ENST00000518931 KRT14P02533 472 aa5.87□□□□□ -1.47
SQLE-203ENST00000518931 ANXA8P13928 327 aa5.87□□□□□ -1.47
SQLE-203ENST00000518931 TRIM21P19474 475 aaKnown RBP5.87□□□□□ -1.47
SQLE-203ENST00000518931 AHCYP23526 432 aa5.87□□□□□ -1.47
SQLE-203ENST00000518931 PSMA5P28066 241 aa5.87□□□□□ -1.47
SQLE-203ENST00000518931 ICAM3P32942 547 aa5.87□□□□□ -1.47
SQLE-203ENST00000518931 NUP62P37198 522 aaPredicted RBP5.87□□□□□ -1.47
SQLE-203ENST00000518931 PRKCIP41743 596 aa5.87□□□□□ -1.47
SQLE-203ENST00000518931 NME5P56597 212 aa5.87□□□□□ -1.47
SQLE-203ENST00000518931 PMP22Q01453 160 aa5.87□□□□□ -1.47
SQLE-203ENST00000518931 TMEM115Q12893 351 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms