RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 TTLL3Q9Y4R7 772 aa3.52□□□□□ -1.85
VPS13B-207ENST00000518569 LOC102723996A0A087X1L8 192 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 GPR75-ASB3A0A0A6YYF3 556 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 C5orf60A6NFR6 353 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 H0YIN7 160 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 PLK4O00444 970 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 ZNF500O60304 480 aaPredicted RBP3.51□□□□□ -1.85
VPS13B-207ENST00000518569 BMP10O95393 424 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 STARD3NLO95772 234 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 TFAP2AP05549 437 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 HSP90AB1P08238 724 aaKnown RBP3.51□□□□□ -1.85
VPS13B-207ENST00000518569 VPREB1P12018 145 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 NMBRP28336 390 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 CD81P60033 236 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 SNRPEP62304 92 aaKnown RBP3.51□□□□□ -1.85
VPS13B-207ENST00000518569 PSMC6P62333 389 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 TMF1P82094 1093 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 GRAPQ13588 217 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 KRT33BQ14525 404 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 MELKQ14680 651 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 FAM98BQ52LJ0 330 aaKnown RBP3.51□□□□□ -1.85
VPS13B-207ENST00000518569 STXBP5Q5T5C0 1151 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 CFAP58Q5T655 872 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 GARNL3Q5VVW2 1013 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 C16orf54Q6UWD8 224 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 PLXDC2Q6UX71 529 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 PACS1Q6VY07 963 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 GDPD4Q6W3E5 623 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 RAD9BQ6WBX8 426 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 ZNF852Q6ZMS4 543 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 FAM43BQ6ZT52 329 aaPredicted RBP3.51□□□□□ -1.85
VPS13B-207ENST00000518569 KCTD8Q6ZWB6 473 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 ENOSF1Q7L5Y1 443 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 HAUS6Q7Z4H7 955 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 LDB1Q86U70 411 aaPredicted RBP3.51□□□□□ -1.85
VPS13B-207ENST00000518569 SLC9B2Q86UD5 537 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 DNAAF5Q86Y56 855 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 SCML4Q8N228 414 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 GUF1Q8N442 669 aaKnown RBP3.51□□□□□ -1.85
VPS13B-207ENST00000518569 GBGT1Q8N5D6 347 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 SYT2Q8N9I0 419 aaPredicted RBP3.51□□□□□ -1.85
VPS13B-207ENST00000518569 PAPD5Q8NDF8 572 aaKnown RBP3.51□□□□□ -1.85
VPS13B-207ENST00000518569 POLR3CQ9BUI4 534 aaPredicted RBP3.51□□□□□ -1.85
VPS13B-207ENST00000518569 MOV10L1Q9BXT6 1211 aaKnown RBP3.51□□□□□ -1.85
VPS13B-207ENST00000518569 TAS2R14Q9NYV8 317 aa3.51□□□□□ -1.85
VPS13B-207ENST00000518569 CHORDC1Q9UHD1 332 aaPredicted RBP3.51□□□□□ -1.85
VPS13B-207ENST00000518569 IGLV5-45A0A087WSX0 123 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 A0A1W2PPI3 338 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 FAM172BPA6NC97 362 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 SYNDIG1LA6NDD5 238 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 MAGEB17A8MXT2 336 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 TCERG1O14776 1098 aaKnown RBP3.5□□□□□ -1.85
VPS13B-207ENST00000518569 CAPN9O14815 690 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 GPR137BO60478 399 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 PRAMEF11O60813 436 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 ERAL1O75616 437 aaKnown RBP3.5□□□□□ -1.85
VPS13B-207ENST00000518569 BAG4O95429 457 aaKnown RBP3.5□□□□□ -1.85
VPS13B-207ENST00000518569 ATP1A1P05023 1023 aaKnown RBP3.5□□□□□ -1.85
VPS13B-207ENST00000518569 RAD52P43351 418 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 LMAN1P49257 510 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 IFI35P80217 286 aaPredicted RBP3.5□□□□□ -1.85
VPS13B-207ENST00000518569 ARL16Q0P5N6 197 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 KIR2DS3Q14952 304 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 NR1D2Q14995 579 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 DUOXA1Q1HG43 343 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 ASPRV1Q53RT3 343 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 SIRPB2Q5JXA9 342 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 GCNT6Q5T4J0 391 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 SMIM29Q86T20 159 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 LINC00346Q8IVM7 164 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 LMNTD1Q8N9Z9 388 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 APPL2Q8NEU8 664 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 DMBX1Q8NFW5 382 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 OR13A1Q8NGR1 328 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 ZNF622Q969S3 477 aaKnown RBP eCLIP3.5□□□□□ -1.85
VPS13B-207ENST00000518569 TMCO6Q96DC7 493 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 ERLEC1Q96DZ1 483 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 LMLNQ96KR4 655 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 TRMT61BQ9BVS5 477 aaKnown RBP3.5□□□□□ -1.85
VPS13B-207ENST00000518569 SEMA6AQ9H2E6 1030 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 HHATLQ9HCP6 504 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 ICAM5Q9UMF0 924 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 NME7Q9Y5B8 376 aa3.5□□□□□ -1.85
VPS13B-207ENST00000518569 CC2D2AQ9P2K1 1620 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 A8MV72 311 aaPredicted RBP3.49□□□□□ -1.85
VPS13B-207ENST00000518569 PRR23D1E9PI22 279 aaPredicted RBP3.49□□□□□ -1.85
VPS13B-207ENST00000518569 SH2B2O14492 632 aaPredicted RBP3.49□□□□□ -1.85
VPS13B-207ENST00000518569 TO15178 435 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 SSX4O60224 188 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 FGF17O60258 216 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 CTSVO60911 334 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 CREG1O75629 220 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 IGLV2-11P01706 119 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 CRYAAP02489 173 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 PRR23D2P0DMB1 279 aaPredicted RBP3.49□□□□□ -1.85
VPS13B-207ENST00000518569 PAX1P15863 534 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 ANOS1P23352 680 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 NR2C2P49116 596 aa3.49□□□□□ -1.85
VPS13B-207ENST00000518569 MMP15P51511 669 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms