RNA–Protein interactions for RNA: ENST00000517785.1

LINC00535-202, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 264 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-202ENST00000517785 ATP13A3Q9H7F0 1226 aa5.53□□□□□ -1.52
LINC00535-202ENST00000517785 MCCC2Q9HCC0 563 aa5.53□□□□□ -1.52
LINC00535-202ENST00000517785 UBE2TQ9NPD8 197 aaPredicted RBP5.53□□□□□ -1.52
LINC00535-202ENST00000517785 WASH6PQ9NQA3 447 aa5.53□□□□□ -1.52
LINC00535-202ENST00000517785 OR12D3Q9UGF7 316 aa5.53□□□□□ -1.52
LINC00535-202ENST00000517785 ARMCX3Q9UH62 379 aaPredicted RBP5.53□□□□□ -1.52
LINC00535-202ENST00000517785 PCM1Q15154 2024 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 CXorf51AA0A1B0GTR3 108 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 CCDC78A2IDD5 438 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 BECN2A8MW95 431 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 GRID2O43424 1007 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 LDB2O43679 373 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 HEXIM1O94992 359 aaKnown RBP5.52□□□□□ -1.53
LINC00535-202ENST00000517785 LCA5LO95447 670 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 YEATS4O95619 227 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 VIPP01282 170 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 F3P13726 295 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 PFKFB1P16118 471 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 CTPS1P17812 591 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 VIPR1P32241 457 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 CAPZBP47756 277 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 PPP2R2AP63151 447 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 ADORA2A-AS1P86434 159 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 APBA1Q02410 837 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 GCNT1Q02742 428 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 FOXD4Q12950 439 aaPredicted RBP5.52□□□□□ -1.53
LINC00535-202ENST00000517785 ZNF235Q14590 738 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 MEA1Q16626 185 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 C15orf59Q2T9L4 293 aaPredicted RBP5.52□□□□□ -1.53
LINC00535-202ENST00000517785 SKOR2Q2VWA4 1001 aaPredicted RBP5.52□□□□□ -1.53
LINC00535-202ENST00000517785 PTCHD3Q3KNS1 767 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 INO80DQ53TQ3 878 aaPredicted RBP5.52□□□□□ -1.53
LINC00535-202ENST00000517785 DCAF10Q5QP82 559 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 IZUMO3Q5VZ72 239 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 FBXO38Q6PIJ6 1188 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 FAM180AQ6UWF9 173 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 FAM198BQ6UWH4 519 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 IGFL3Q6UXB1 125 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 SPOCD1Q6ZMY3 1216 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 TMEM26Q6ZUK4 368 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 NCCRP1Q6ZVX7 275 aaPredicted RBP5.52□□□□□ -1.53
LINC00535-202ENST00000517785 MRGPREQ86SM8 312 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 PRIMA1Q86XR5 153 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 RAB43Q86YS6 212 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 TMEM151BQ8IW70 566 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 TRIM48Q8IWZ4 208 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 PYROXD2Q8N2H3 581 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 CCDC185Q8N715 623 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 EMC1Q8N766 993 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 CLEC1AQ8NC01 280 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 LRRN4CLQ8ND94 238 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 DNAJB14Q8TBM8 379 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 CASKIN2Q8WXE0 1202 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 KLHL6Q8WZ60 621 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 TM9SF4Q92544 642 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 SNX21Q969T3 373 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 NT5C3BQ969T7 300 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 HDAC11Q96DB2 347 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 MTFMTQ96DP5 389 aaKnown RBP5.52□□□□□ -1.53
LINC00535-202ENST00000517785 CLIP3Q96DZ5 547 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 C14orf79Q96F83 325 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 CELF6Q96J87 481 aaKnown RBP5.52□□□□□ -1.53
LINC00535-202ENST00000517785 ZNF514Q96K75 400 aaPredicted RBP5.52□□□□□ -1.53
LINC00535-202ENST00000517785 ZNF396Q96N95 335 aaPredicted RBP5.52□□□□□ -1.53
LINC00535-202ENST00000517785 SMIM14Q96QK8 99 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 TUBGCP5Q96RT8 1024 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 TSG101Q99816 390 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 SLX1AQ9BQ83 275 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 HERPUD2Q9BSE4 406 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 ABCG8Q9H221 673 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 EPB41L1Q9H4G0 881 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 UPF2Q9HAU5 1272 aaKnown RBP5.52□□□□□ -1.53
LINC00535-202ENST00000517785 ARFGAP3Q9NP61 516 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 OLAHQ9NV23 265 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 BTRCQ9Y297 605 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 SIK3Q9Y2K2 1263 aa5.52□□□□□ -1.53
LINC00535-202ENST00000517785 GTF3C1Q12789 2109 aa5.51□□□□□ -1.53
LINC00535-202ENST00000517785 ANK3Q12955 4377 aaKnown RBP5.51□□□□□ -1.53
LINC00535-202ENST00000517785 KIR2DS5A0A0G2JLQ3 304 aa5.51□□□□□ -1.53
LINC00535-202ENST00000517785 A0A0G2JNG1 304 aa5.51□□□□□ -1.53
LINC00535-202ENST00000517785 A0A1W2PQJ5 194 aa5.51□□□□□ -1.53
LINC00535-202ENST00000517785 NPIPB15A6NHN6 443 aaPredicted RBP5.51□□□□□ -1.53
LINC00535-202ENST00000517785 OR52A4PA6NMU1 304 aa5.51□□□□□ -1.53
LINC00535-202ENST00000517785 PDZK1P1A8MUH7 402 aa5.51□□□□□ -1.53
LINC00535-202ENST00000517785 KIR2DS3K7RE56 304 aa5.51□□□□□ -1.53
LINC00535-202ENST00000517785 TRAFD1O14545 582 aaPredicted RBP5.51□□□□□ -1.53
LINC00535-202ENST00000517785 TOX3O15405 576 aaPredicted RBP5.51□□□□□ -1.53
LINC00535-202ENST00000517785 CREB3O43889 395 aa5.51□□□□□ -1.53
LINC00535-202ENST00000517785 DNAJC6O75061 913 aa5.51□□□□□ -1.53
LINC00535-202ENST00000517785 CPP00450 1065 aa5.51□□□□□ -1.53
LINC00535-202ENST00000517785 KLK3P07288 261 aaPredicted RBP5.51□□□□□ -1.53
LINC00535-202ENST00000517785 C8BP07358 591 aa5.51□□□□□ -1.53
LINC00535-202ENST00000517785 CAPN1P07384 714 aa5.51□□□□□ -1.53
LINC00535-202ENST00000517785 PNMA6AP0CW24 399 aaPredicted RBP5.51□□□□□ -1.53
LINC00535-202ENST00000517785 EPHB2P29323 1055 aa5.51□□□□□ -1.53
LINC00535-202ENST00000517785 ADRA1BP35368 520 aa5.51□□□□□ -1.53
LINC00535-202ENST00000517785 PBX1P40424 430 aa5.51□□□□□ -1.53
LINC00535-202ENST00000517785 TSFMP43897 325 aaKnown RBP5.51□□□□□ -1.53
LINC00535-202ENST00000517785 SCNN1BP51168 640 aa5.51□□□□□ -1.53
LINC00535-202ENST00000517785 IST1P53990 364 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms