RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 VSTM4Q8IW00 320 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 TRIM59Q8IWR1 403 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 CRYBG2Q8N1P7 616 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 MSANTD4Q8NCY6 345 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 FBXL13Q8NEE6 735 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 PDZD8Q8NEN9 1154 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 ANKRD20A12PQ8NF67 263 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 Q8NFD4 153 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 OR5B17Q8NGF7 314 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 DDI1Q8WTU0 396 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 NELFBQ8WX92 580 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 RNASE6Q93091 150 aaKnown RBP3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 SLC35C1Q96A29 364 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 TTC17Q96AE7 1141 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 MSI2Q96DH6 328 aaKnown RBP3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 FAM212AQ96EL1 285 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 AHCYL2Q96HN2 611 aaKnown RBP3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 HPDLQ96IR7 371 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 CFAP57Q96MR6 1250 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 WDR24Q96S15 920 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 RBM15Q96T37 977 aaKnown RBP eCLIP3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 NPAS2Q99743 824 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 TRIM51Q9BSJ1 452 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 CARD6Q9BX69 1037 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 NLNQ9BYT8 704 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 IMPG2Q9BZV3 1241 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 MTMR12Q9C0I1 747 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 ATG10Q9H0Y0 220 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 TP63Q9H3D4 680 aaPredicted RBP3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 ZNF703Q9H7S9 590 aaPredicted RBP3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 ESM1Q9NQ30 184 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 RAB20Q9NX57 234 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 P4HTMQ9NXG6 502 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 IFNKQ9P0W0 207 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 Q9UFV3 132 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 RSPH14Q9UHP6 348 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 SIX4Q9UIU6 781 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 RAB21Q9UL25 225 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 KIAA1257Q9ULG3 409 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 AGAP1Q9UPQ3 857 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 RRP15Q9Y3B9 282 aaKnown RBP3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 ST14Q9Y5Y6 855 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 MRFAP1Q9Y605 127 aa3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 APOBP04114 4563 aaKnown RBP3.08□□□□□ -1.92
SCARNA13-201ENST00000516672 PCM1Q15154 2024 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 HEATR5AQ86XA9 2040 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 PHF3Q92576 2039 aaKnown RBP3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 DYTNA2CJ06 578 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 F8VP50 259 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 GOLGA6L19H0YKK7 550 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 CCDC188H7C350 402 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 BIN1O00499 593 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 POLR3GO15318 223 aaPredicted RBP3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 ALOX12BO75342 701 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 STC2O76061 302 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 KLHL18O94889 574 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 VNN1O95497 513 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 F10P00742 488 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 ZDHHC11BP0C7U3 371 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 ATP1A3P13637 1013 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 ZNF18P17022 549 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 CDK11BP21127 795 aaKnown RBP3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 WARSP23381 471 aaKnown RBP3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 TBXAS1P24557 533 aaPredicted RBP3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 YWHAQP27348 245 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 POLR2BP30876 1174 aaKnown RBP3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 CD70P32970 193 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 EIF4A3P38919 411 aaKnown RBP3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 GABRB2P47870 512 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 CPA2P48052 419 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 FMO5P49326 533 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 CASP4P49662 377 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 PGFP49763 221 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 PSEN1P49768 467 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 MXI1P50539 228 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 PMS1P54277 932 aaKnown RBP3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 CORO7P57737 925 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 YWHAEP62258 255 aaKnown RBP3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 YPEL5P62699 121 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 TNNC1P63316 161 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 DLG4P78352 724 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 GPLD1P80108 840 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 FANCCQ00597 558 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 MYL5Q02045 173 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 GCNT1Q02742 428 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 PPP3CAQ08209 521 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 INCA1Q0VD86 236 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 ILF3Q12906 894 aaKnown RBP eCLIP3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 STILQ15468 1287 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 MEA1Q16626 185 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 ZSCAN26Q16670 478 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 LONRF2Q1L5Z9 754 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 SOWAHAQ2M3V2 549 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 WDR72Q3MJ13 1102 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 ZNF667Q5HYK9 610 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 BEND6Q5SZJ8 279 aaPredicted RBP3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 CDKAL1Q5VV42 579 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 ICE2Q659A1 982 aa3.07□□□□□ -1.92
SCARNA13-201ENST00000516672 PWWP2BQ6NUJ5 590 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms