RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 TBC1D3LB9A6J9 549 aa-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 EEF2KO00418 725 aaKnown RBP-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 NBNO60934 754 aa-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 TMCC2O75069 709 aa-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 OFD1O75665 1012 aa-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 TBC1D3HP0C7X1 549 aa-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 ZKSCAN1P17029 563 aaPredicted RBP-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 ARHGAP15Q53QZ3 475 aa-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 TBC1D3GQ6DHY5 549 aa-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 TBC1D3CQ6IPX1 549 aa-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 AADACL2Q6P093 401 aa-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 PACS1Q6VY07 963 aa-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 TMTC3Q6ZXV5 915 aa-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 SPATS2Q86XZ4 545 aaKnown RBP-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 CCDC28AQ8IWP9 274 aa-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 TBC1D3Q8IZP1 549 aaPredicted RBP-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 AFAP1L2Q8N4X5 818 aa-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 TMEM57Q8N5G2 664 aa-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 SCCPDHQ8NBX0 429 aa-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 PHOSPHO2Q8TCD6 241 aa-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 ITLN1Q8WWA0 313 aa-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 SNAPC3Q92966 411 aa-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 GRAMD1AQ96CP6 724 aa-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 RIPOR3Q96MK2 946 aa-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 DNAJC2Q99543 621 aaKnown RBP-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 HEYLQ9NQ87 328 aaPredicted RBP-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 DDX4Q9NQI0 724 aaKnown RBP-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 ATP8A2Q9NTI2 1148 aa-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 KLHL9Q9P2J3 617 aa-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 PDP2Q9P2J9 529 aa-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 ZNF212Q9UDV6 495 aa-1.14□□□□□ -2.59
RNU6-539P-201ENST00000516665 IGLV2-18A0A075B6J9 118 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 ZFP92A6NM28 416 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 J3KTA2 159 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 ATP6V0E1O15342 81 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 KLK8O60259 260 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 DAB1O75553 588 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 KRT38O76015 456 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 CCNDBP1O95273 360 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 VIPP01282 170 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 IL1AP01583 271 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 LIPFP07098 398 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 CGB7P0DN87 165 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 MYBL2P10244 700 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 CD58P19256 250 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 UGT1A1P22309 533 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 DCDC1P59894 354 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 KRT85P78386 507 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 PAX5Q02548 391 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 CDK18Q07002 472 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 CSHL1Q14406 222 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 SGCBQ16585 318 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 DUOXA1Q1HG43 343 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 ABCB5Q2M3G0 1257 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 MS4A18Q3C1V0 323 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 SPECC1Q5M775 1068 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 RRAGBQ5VZM2 374 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 CES4AQ5XG92 561 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 RAP1GAP2Q684P5 730 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 MRNIPQ6NTE8 343 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 C16orf86Q6ZW13 317 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 HMGN2P46Q86SG4 172 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 DHX40Q8IX18 779 aaKnown RBP-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 FBXO16Q8IX29 292 aaPredicted RBP-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 CEND1Q8N111 149 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 C4orf32Q8N8J7 132 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 VANGL1Q8TAA9 524 aaPredicted RBP-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 ZNF596Q8TC21 504 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 MARCH1Q8TCQ1 289 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 SETD7Q8WTS6 366 aaKnown RBP-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 OTULINQ96BN8 352 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 SUCLG2Q96I99 432 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 GPR88Q9GZN0 384 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 CA14Q9ULX7 337 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 STON1Q9Y6Q2 735 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 A3GALT2U3KPV4 340 aa-1.15□□□□□ -2.59
RNU6-539P-201ENST00000516665 FAM234BA2RU67 622 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 FAM90A20PA6NIJ5 464 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 AGAP5A6NIR3 686 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 OR6C76A6NM76 312 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 HSPB2A8KAH6 182 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 KLRF2D3W0D1 207 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 G3V2L1 256 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 GRM8O00222 908 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 EBAG9O00559 213 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 TSC22D2O75157 780 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 IGHEP01854 428 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 P0C880 135 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 GP1BBP13224 206 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 PECAM1P16284 738 aaPredicted RBP-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 MAOAP21397 527 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 EPHA8P29322 1005 aaPredicted RBP-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 PDHA2P29803 388 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 CDH5P33151 784 aaPredicted RBP-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 RYKP34925 604 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 CDH11P55287 796 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 HSPB2Q16082 182 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 GRAMD1BQ3KR37 738 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 ZNF766Q5HY98 468 aa-1.16□□□□□ -2.6
RNU6-539P-201ENST00000516665 DUS1LQ6P1R4 473 aaKnown RBP-1.16□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms