RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 SESN1Q9Y6P5 492 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 ZFP37Q9Y6Q3 630 aaPredicted RBP3.15□□□□□ -1.91
HERC4-215ENST00000515753 KDM5CP41229 1560 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 FLT1P17948 1338 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 A2MP01023 1474 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 ARHGAP35Q9NRY4 1499 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 KIF14Q15058 1648 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 CPS1P31327 1500 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 TNRQ92752 1358 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 MIA2Q96PC5 1412 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 A0A0G2JPF8 293 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 TRIM64A6NGJ6 449 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 TRIM64BA6NI03 449 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 HNRNPCL3B7ZW38 293 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 PSMA7O14818 248 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 SCAMP1O15126 338 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 HNRNPCL4P0DMR1 293 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 RARGP13631 454 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 ZNF182P17025 639 aaPredicted RBP3.14□□□□□ -1.91
HERC4-215ENST00000515753 IFNAR1P17181 557 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 BDKRB2P30411 391 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 KRT2P35908 639 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 PBX3P40426 434 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 CAPZA2P47755 286 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 CLK1P49759 484 aaKnown RBP3.14□□□□□ -1.91
HERC4-215ENST00000515753 MMP14P50281 582 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 MRPL12P52815 198 aaKnown RBP3.14□□□□□ -1.91
HERC4-215ENST00000515753 CSNK2A1P68400 391 aaPredicted RBP3.14□□□□□ -1.91
HERC4-215ENST00000515753 UBXN2AP68543 259 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 SORDQ00796 357 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 NIPAL4Q0D2K0 466 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 CSTF3Q12996 717 aaKnown RBP3.14□□□□□ -1.91
HERC4-215ENST00000515753 DECR1Q16698 335 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 C15orf59Q2T9L4 293 aaPredicted RBP3.14□□□□□ -1.91
HERC4-215ENST00000515753 C9orf152Q5JTZ5 239 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 CEP85LQ5SZL2 805 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 HIST2H2BCQ6DN03 193 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 HIST2H2BDQ6DRA6 164 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 PLBD1Q6P4A8 553 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 BRAT1Q6PJG6 821 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 SLC36A4Q6YBV0 504 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 MFSD6Q6ZSS7 791 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 TMEM219Q86XT9 240 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 NRROSQ86YC3 692 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 CEP57L1Q8IYX8 460 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 PCDH20Q8N6Y1 951 aaKnown RBP3.14□□□□□ -1.91
HERC4-215ENST00000515753 SYT2Q8N9I0 419 aaPredicted RBP3.14□□□□□ -1.91
HERC4-215ENST00000515753 TDRD5Q8NAT2 981 aaKnown RBP3.14□□□□□ -1.91
HERC4-215ENST00000515753 CSNK2A3Q8NEV1 391 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 RND1Q92730 232 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 SLC22A18Q96BI1 424 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 PGAP3Q96FM1 320 aaPredicted RBP3.14□□□□□ -1.91
HERC4-215ENST00000515753 TMEM68Q96MH6 324 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 ACOX2Q99424 681 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 MMP28Q9H239 520 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 NDST4Q9H3R1 872 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 MAGIXQ9H6Y5 334 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 FBRSL1Q9HCM7 1045 aaKnown RBP3.14□□□□□ -1.91
HERC4-215ENST00000515753 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.14□□□□□ -1.91
HERC4-215ENST00000515753 DLGAP4Q9Y2H0 992 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 ADAM18Q9Y3Q7 739 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 TCOF1Q13428 1488 aaKnown RBP3.14□□□□□ -1.91
HERC4-215ENST00000515753 ZNF644Q9H582 1327 aaPredicted RBP3.14□□□□□ -1.91
HERC4-215ENST00000515753 CDK13Q14004 1512 aaKnown RBP3.14□□□□□ -1.91
HERC4-215ENST00000515753 FAM135AQ9P2D6 1515 aa3.14□□□□□ -1.91
HERC4-215ENST00000515753 GPATCH8Q9UKJ3 1502 aaKnown RBP3.14□□□□□ -1.91
HERC4-215ENST00000515753 LTBP4Q8N2S1 1624 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 GTPBP10A4D1E9 387 aaKnown RBP3.13□□□□□ -1.91
HERC4-215ENST00000515753 FAM172BPA6NC97 362 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 A8MV72 311 aaPredicted RBP3.13□□□□□ -1.91
HERC4-215ENST00000515753 EIF3CLB5ME19 914 aaKnown RBP3.13□□□□□ -1.91
HERC4-215ENST00000515753 VCYO14598 125 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 SPINT2O43291 252 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 DAB1O75553 588 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 IPO7O95373 1038 aaKnown RBP3.13□□□□□ -1.91
HERC4-215ENST00000515753 GGPS1O95749 300 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 RB1P06400 928 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 CCDC175P0C221 793 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 MYBL1P10243 752 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 UBA1P22314 1058 aaKnown RBP3.13□□□□□ -1.91
HERC4-215ENST00000515753 SP100P23497 879 aaPredicted RBP3.13□□□□□ -1.91
HERC4-215ENST00000515753 PSMA3P25788 255 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 HOXA13P31271 388 aaPredicted RBP3.13□□□□□ -1.91
HERC4-215ENST00000515753 TMPOP42166 694 aaKnown RBP3.13□□□□□ -1.91
HERC4-215ENST00000515753 SLC15A1P46059 708 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 NRIP1P48552 1158 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 PPP5CP53041 499 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 PPARDQ03181 441 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 RELQ04864 619 aaPredicted RBP3.13□□□□□ -1.91
HERC4-215ENST00000515753 FOXM1Q08050 763 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 SLC20A2Q08357 652 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 ACSM2AQ08AH3 577 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 BAATQ14032 418 aaPredicted RBP3.13□□□□□ -1.91
HERC4-215ENST00000515753 RBM39Q14498 530 aaKnown RBP3.13□□□□□ -1.91
HERC4-215ENST00000515753 PCLAFQ15004 111 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 ADIPOQQ15848 244 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 COL28A1Q2UY09 1125 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 ADALQ6DHV7 355 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 SIGIRRQ6IA17 410 aa3.13□□□□□ -1.91
HERC4-215ENST00000515753 JADE1Q6IE81 842 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms