RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	FBN3	Q75N90	2809 aa		10.23	□□□□□ -0.77
CLDND1-231	ENST00000515620	AKAP9	Q99996	3911 aa		10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	PKDREJ	Q9NTG1	2253 aa		10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620		A0A1W2PQJ5	194 aa		10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	VEGFD	O43915	354 aa		10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	KLF7	O75840	302 aa	Predicted RBP	10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	RNF8	O76064	485 aa		10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	CDK14	O94921	469 aa		10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	IGHE	P01854	428 aa		10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	SERPINB6	P35237	376 aa		10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	KPNA2	P52292	529 aa	Known RBP	10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	CDC16	Q13042	620 aa		10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	MAMLD1	Q13495	774 aa		10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	QPCT	Q16769	361 aa		10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	SMTNL2	Q2TAL5	461 aa		10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	ZNF789	Q5FWF6	425 aa		10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	ALG1L	Q6GMV1	187 aa		10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	ARMC6	Q6NXE6	501 aa		10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	C11orf96	Q7Z7L8	435 aa		10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	CDH24	Q86UP0	819 aa		10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	PSTK	Q8IV42	348 aa	Known RBP	10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	PPP4R1	Q8TF05	950 aa		10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	EID2B	Q96D98	161 aa		10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	CNDP1	Q96KN2	507 aa		10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	GBP5	Q96PP8	586 aa		10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	CSPG4P5	Q96PW8	444 aa		10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	SLX1A	Q9BQ83	275 aa		10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	NUP85	Q9BW27	656 aa		10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	TRIM7	Q9C029	511 aa		10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	CHST11	Q9NPF2	352 aa		10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	IMP3	Q9NV31	184 aa	Known RBP	10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	P4HTM	Q9NXG6	502 aa		10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	TAB2	Q9NYJ8	693 aa		10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	PTRH2	Q9Y3E5	179 aa	Known RBP	10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	CFAP20	Q9Y6A4	193 aa	Known RBP	10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	ABCA2	Q9BZC7	2435 aa		10.22	□□□□□ -0.77
CLDND1-231	ENST00000515620	NAV3	Q8IVL0	2385 aa		10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	OR6C74	A6NCV1	312 aa		10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	SLC9B1P1	A6NJY1	282 aa		10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	BPI	P17213	487 aa		10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	AGXT	P21549	392 aa		10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	HADHA	P40939	763 aa		10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	FOLR3	P41439	243 aa		10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	TSFM	P43897	325 aa	Known RBP	10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	KCNK10	P57789	538 aa		10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	DCDC1	P59894	354 aa		10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	ADCY2	Q08462	1091 aa		10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	GALNT3	Q14435	633 aa		10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	SSPN	Q14714	243 aa		10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	ZNF169	Q14929	603 aa	Predicted RBP	10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	CAMK4	Q16566	473 aa		10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	ZNF630	Q2M218	657 aa	Predicted RBP	10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	VWA2	Q5GFL6	755 aa		10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	MLIP	Q5VWP3	458 aa		10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	DUS1L	Q6P1R4	473 aa	Known RBP	10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	FAM180A	Q6UWF9	173 aa		10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	POLN	Q7Z5Q5	900 aa		10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	TRAM1L1	Q8N609	369 aa		10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	MLKL	Q8NB16	471 aa		10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	ARRDC2	Q8TBH0	407 aa		10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	DNAJB14	Q8TBM8	379 aa		10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	HSPH1	Q92598	858 aa		10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	RELT	Q969Z4	430 aa		10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	AGPAT1	Q99943	283 aa		10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	DPH2	Q9BQC3	489 aa	Predicted RBP	10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	DHRS4	Q9BTZ2	278 aa		10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	ZFYVE1	Q9HBF4	777 aa		10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	OLAH	Q9NV23	265 aa		10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	PARVA	Q9NVD7	372 aa		10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	SUCO	Q9UBS9	1254 aa	Known RBP	10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	SHOC2	Q9UQ13	582 aa		10.21	□□□□□ -0.77
CLDND1-231	ENST00000515620	DCHS2	Q6V1P9	2916 aa		10.21	□□□□□ -0.78
CLDND1-231	ENST00000515620	SPG11	Q96JI7	2443 aa		10.21	□□□□□ -0.78
CLDND1-231	ENST00000515620	ANKRD66	B4E2M5	251 aa		10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	ZNF749	O43361	778 aa		10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	MFSD11	O43934	449 aa		10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	GADD45B	O75293	160 aa	Predicted RBP	10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	ALOX12B	O75342	701 aa		10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	JRK	O75564	520 aa		10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	SVIL	O95425	2214 aa		10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	PIRT	P0C851	137 aa		10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	MTHFD1	P11586	935 aa	Known RBP	10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	CDH3	P22223	829 aa		10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	CES1	P23141	567 aa		10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	IL1R2	P27930	398 aa		10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	SSTR2	P30874	369 aa		10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	PREP	P48147	710 aa		10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	ZNF165	P49910	485 aa		10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	FOXL2	P58012	376 aa		10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	KRTAP10-9	P60411	292 aa		10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	NIPAL4	Q0D2K0	466 aa		10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	XRCC4	Q13426	336 aa		10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	GTF2H3	Q13889	308 aa		10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	DPYSL2	Q16555	572 aa		10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	CYP2A13	Q16696	494 aa		10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	ZNF385C	Q66K41	422 aa	Predicted RBP	10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	B3GNTL1	Q67FW5	361 aa	Predicted RBP	10.2	□□□□□ -0.78
CLDND1-231	ENST00000515620	PDPK2P	Q6A1A2	396 aa		10.2	□□□□□ -0.78

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