RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 TRMT10BQ6PF06 316 aaKnown RBP12.99□□□□□ -0.33
TCOF1-213ENST00000514442 ADAMTSL2Q86TH1 951 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 WDR48Q8TAF3 677 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 C1QTNF7Q9BXJ2 289 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 KAT8Q9H7Z6 458 aaKnown RBP12.99□□□□□ -0.33
TCOF1-213ENST00000514442 SPATA2Q9UM82 520 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.99□□□□□ -0.33
TCOF1-213ENST00000514442 ZW10O43264 779 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 RGS10O43665 173 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 NDST3O95803 873 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 MLYCDO95822 493 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 IFNA14P01570 189 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 ANXA6P08133 673 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 RAB25P57735 213 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 GAD2Q05329 585 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 NFATC3Q12968 1075 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 XKR6Q5GH73 641 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 COLEC12Q5KU26 742 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 ZNF605Q86T29 641 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 SLC17A6Q9P2U8 582 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 OAZ3Q9UMX2 235 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 DUSP12Q9UNI6 340 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 TTC24A2A3L6 582 aaPredicted RBP12.99□□□□□ -0.33
TCOF1-213ENST00000514442 H3BMQ9 156 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 ARVCFO00192 962 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 AZIN1O14977 448 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 EFCAB14O75071 495 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 ADH1CP00326 375 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 ZNF57Q68EA5 555 aaPredicted RBP12.99□□□□□ -0.33
TCOF1-213ENST00000514442 CHST9Q7L1S5 443 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 UTP15Q8TED0 518 aaKnown RBP12.99□□□□□ -0.33
TCOF1-213ENST00000514442 FBXL20Q96IG2 436 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 COG8Q96MW5 612 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 AGAP2Q99490 1192 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 RBM4BQ9BQ04 359 aaKnown RBP12.99□□□□□ -0.33
TCOF1-213ENST00000514442 RBM4Q9BWF3 364 aaKnown RBP12.99□□□□□ -0.33
TCOF1-213ENST00000514442 BCO2Q9BYV7 579 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.99□□□□□ -0.33
TCOF1-213ENST00000514442 ZNF224Q9NZL3 707 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 NDOR1Q9UHB4 597 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 SNX6Q9UNH7 406 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 TCAF1Q9Y4C2 921 aa12.99□□□□□ -0.33
TCOF1-213ENST00000514442 PABPC1P11940 636 aaKnown RBP12.98□□□□□ -0.33
TCOF1-213ENST00000514442 CES1P23141 567 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 HPCAL1P37235 193 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 MTHFRP42898 656 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 CHRNA4P43681 627 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 CDH4P55283 916 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 SEMG2Q02383 582 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 DPYSL2Q16555 572 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 AP5B1Q2VPB7 878 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 METTL3Q86U44 580 aaKnown RBP12.98□□□□□ -0.33
TCOF1-213ENST00000514442 TMCO6Q96DC7 493 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 ACAT2Q9BWD1 397 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 SLC25A51Q9H1U9 297 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 A0A1B0GVM2 712 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 TCAF2A6NFQ2 919 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 UGT2B11O75310 529 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 LRATO95237 230 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 FTH1P02794 183 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 TNNI3P19429 210 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 GRIA1P42261 906 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 YBEYP58557 167 aaPredicted RBP12.98□□□□□ -0.33
TCOF1-213ENST00000514442 KLF1Q13351 362 aaPredicted RBP12.98□□□□□ -0.33
TCOF1-213ENST00000514442 CYP20A1Q6UW02 462 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 HDDC2Q7Z4H3 204 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 CUZD1Q86UP6 607 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 IQCF2Q8IXL9 164 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 DCBLD1Q8N8Z6 715 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 TOR4AQ9NXH8 423 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 GLYATL1P3A0A0U1RQE8 302 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 ABCB7O75027 752 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 ANGPTL1O95841 491 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 PRKACBP22694 351 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 ATP6V0D1P61421 351 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 RPS7P62081 194 aaKnown RBP12.98□□□□□ -0.33
TCOF1-213ENST00000514442 DLG2Q15700 870 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 ATXN7L2Q5T6C5 722 aaPredicted RBP12.98□□□□□ -0.33
TCOF1-213ENST00000514442 CYP4Z1Q86W10 505 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 DENND6AQ8IWF6 608 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 NIPA2Q8N8Q9 360 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 OR8D1Q8WZ84 308 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 GPR21Q99679 349 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 HTATIP2Q9BUP3 242 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 HDHD2Q9H0R4 259 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 RPF2Q9H7B2 306 aaKnown RBP12.98□□□□□ -0.33
TCOF1-213ENST00000514442 B3GNT3Q9Y2A9 372 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 CCDC85CA6NKD9 419 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 CRYZL1O95825 349 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 CTSEP14091 401 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 HPGDP15428 266 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 PPP2R1BP30154 601 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 ZDHHC14Q8IZN3 488 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 SLC28A3Q9HAS3 691 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 GKN1Q9NS71 199 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 RAD18Q9NS91 495 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 SNX7Q9UNH6 387 aa12.98□□□□□ -0.33
TCOF1-213ENST00000514442 A0A0U1RQF3 1178 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 BCKDKO14874 412 aa12.97□□□□□ -0.33
TCOF1-213ENST00000514442 IRAK2O43187 625 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms