RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 PENKP01210 267 aaPredicted RBP3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 NGFRP08138 427 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 DANCRP0C864 163 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 HOXB2P14652 356 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 PSMA3P25788 255 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 HSPA4P34932 840 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 PIGAP37287 484 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 EIF2S3P41091 472 aaKnown RBP3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 MTHFRP42898 656 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 ALDH3A2P51648 485 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 NAGLUP54802 743 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 HNRNPH2P55795 449 aaKnown RBP3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 RBPJQ06330 500 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 PTK6Q13882 451 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 SLMAPQ14BN4 828 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 MEP1AQ16819 746 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 MEP1BQ16820 701 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 EIF2S3LQ2VIR3 472 aaKnown RBP3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 ZNF284Q2VY69 593 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 DNTTIP2Q5QJE6 756 aaKnown RBP3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 DCAF12L2Q5VW00 463 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 TEX38Q6PEX7 206 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 IYDQ6PHW0 289 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 LINC00696Q6ZRV3 163 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 C18orf65Q6ZTR6 163 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 RAPH1Q70E73 1250 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 DET1Q7L5Y6 550 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 PIWIL3Q7Z3Z3 882 aaKnown RBP3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 SPATA19Q7Z5L4 167 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 NRROSQ86YC3 692 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 BEST3Q8N1M1 668 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 GCSAMQ8N6F7 178 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 EMC1Q8N766 993 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 B4GALNT2Q8NHY0 566 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 C9orf43Q8TAL5 461 aaPredicted RBP3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 ROBO4Q8WZ75 1007 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 MR1Q95460 341 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 PHF21BQ96EK2 531 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 CCDC43Q96MW1 224 aaKnown RBP3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 CAMK1GQ96NX5 476 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 SLC22A12Q96S37 553 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 ABHD6Q9BV23 337 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 WNT5BQ9H1J7 359 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 CNOT10Q9H9A5 744 aaKnown RBP3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 CD93Q9NPY3 652 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 CNGB3Q9NQW8 809 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 SLC24A2Q9UI40 661 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 CDH7Q9ULB5 785 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 MYO6Q9UM54 1294 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 CDC14AQ9UNH5 594 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 KLHL20Q9Y2M5 609 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 KNSTRNQ9Y448 316 aa3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 ATXN2Q99700 1313 aaKnown RBP3.36□□□□□ -1.87
CALCOCO2-223ENST00000514267 FGD5Q6ZNL6 1462 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 PRXQ9BXM0 1461 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 FANCD2Q9BXW9 1451 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 OR6C75A6NL08 312 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 FAM90A26D6RGX4 464 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 H0YAE9 185 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 H0YGN5 161 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 DNM1LO00429 736 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 ITM2AO43736 263 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 ZIC3O60481 467 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 DIAPH2O60879 1101 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 GOSR1O95249 250 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 G6PDP11413 515 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 FGF3P11487 239 aaPredicted RBP3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 NAGAP17050 411 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 HRH2P25021 359 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 NMBRP28336 390 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 CDC25CP30307 473 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 BDKRB2P30411 391 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 HOXD3P31249 432 aaPredicted RBP3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 STX2P32856 288 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 HNF4AP41235 474 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 APOBEC1P41238 236 aaKnown RBP3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 CTSCP53634 463 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 KRTAP10-9P60411 292 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 SEC61BP60468 96 aaKnown RBP3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 TUBB4BP68371 445 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 CDK3Q00526 305 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 MELKQ14680 651 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 EFNB3Q15768 340 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 VWC2Q2TAL6 325 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 CCDC92Q53HC0 331 aaPredicted RBP3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 ZRANB3Q5FWF4 1079 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 C6orf163Q5TEZ5 329 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 SFMBT2Q5VUG0 894 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 DUS1LQ6P1R4 473 aaKnown RBP3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 SHQ1Q6PI26 577 aaKnown RBP3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 MOXD1Q6UVY6 613 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 B3GNT6Q6ZMB0 384 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 ABI3BPQ7Z7G0 1075 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 ZSCAN30Q86W11 494 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 ZC3HC1Q86WB0 502 aaKnown RBP3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 TMEM173Q86WV6 379 aaPredicted RBP3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 SPATA2LQ8IUW3 424 aaPredicted RBP3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 CCDC170Q8IYT3 715 aa3.35□□□□□ -1.87
CALCOCO2-223ENST00000514267 SIX6OS1Q8N1H7 587 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms