RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 DUSP28Q4G0W2 176 aa5.06□□□□□ -1.6
CHD1-209ENST00000512844 SLC35E4Q6ICL7 350 aa5.06□□□□□ -1.6
CHD1-209ENST00000512844 MZT2BQ6NZ67 158 aa5.06□□□□□ -1.6
CHD1-209ENST00000512844 TMCO3Q6UWJ1 677 aa5.06□□□□□ -1.6
CHD1-209ENST00000512844 PLXDC2Q6UX71 529 aa5.06□□□□□ -1.6
CHD1-209ENST00000512844 CEACAM20Q6UY09 585 aa5.06□□□□□ -1.6
CHD1-209ENST00000512844 ATG9AQ7Z3C6 839 aa5.06□□□□□ -1.6
CHD1-209ENST00000512844 PTOV1Q86YD1 416 aa5.06□□□□□ -1.6
CHD1-209ENST00000512844 CEP97Q8IW35 865 aa5.06□□□□□ -1.6
CHD1-209ENST00000512844 CTAGE4Q8IX94 777 aa5.06□□□□□ -1.6
CHD1-209ENST00000512844 RBM15BQ8NDT2 890 aaKnown RBP5.06□□□□□ -1.6
CHD1-209ENST00000512844 MTERF3Q96E29 417 aa5.06□□□□□ -1.6
CHD1-209ENST00000512844 DUX3Q96PT4 197 aa5.06□□□□□ -1.6
CHD1-209ENST00000512844 GFI1Q99684 422 aa5.06□□□□□ -1.6
CHD1-209ENST00000512844 APOBEC3GQ9HC16 384 aaKnown RBP5.06□□□□□ -1.6
CHD1-209ENST00000512844 ZBTB20Q9HC78 741 aaPredicted RBP5.06□□□□□ -1.6
CHD1-209ENST00000512844 PAG1Q9NWQ8 432 aa5.06□□□□□ -1.6
CHD1-209ENST00000512844 PSD3Q9NYI0 1048 aa5.06□□□□□ -1.6
CHD1-209ENST00000512844 SUCLA2Q9P2R7 463 aaPredicted RBP5.06□□□□□ -1.6
CHD1-209ENST00000512844 ADD3Q9UEY8 706 aaKnown RBP5.06□□□□□ -1.6
CHD1-209ENST00000512844 TMEM5Q9Y2B1 443 aa5.06□□□□□ -1.6
CHD1-209ENST00000512844 A0A087WYN8 130 aa5.05□□□□□ -1.6
CHD1-209ENST00000512844 A0A1W2PQ09 198 aa5.05□□□□□ -1.6
CHD1-209ENST00000512844 OR2M5A3KFT3 312 aa5.05□□□□□ -1.6
CHD1-209ENST00000512844 PRR23AA6NEV1 266 aa5.05□□□□□ -1.6
CHD1-209ENST00000512844 PRKNO60260 465 aaPredicted RBP5.05□□□□□ -1.6
CHD1-209ENST00000512844 GPR137BO60478 399 aa5.05□□□□□ -1.6
CHD1-209ENST00000512844 INHBAP08476 426 aa5.05□□□□□ -1.6
CHD1-209ENST00000512844 CSH1P0DML2 217 aa5.05□□□□□ -1.6
CHD1-209ENST00000512844 CSH2P0DML3 217 aa5.05□□□□□ -1.6
CHD1-209ENST00000512844 MMP9P14780 707 aa5.05□□□□□ -1.6
CHD1-209ENST00000512844 PAX1P15863 534 aa5.05□□□□□ -1.6
CHD1-209ENST00000512844 NMBRP28336 390 aa5.05□□□□□ -1.6
CHD1-209ENST00000512844 CDKN1AP38936 164 aa5.05□□□□□ -1.6
CHD1-209ENST00000512844 NR2C2P49116 596 aa5.05□□□□□ -1.6
CHD1-209ENST00000512844 FAM205BPQ63HN1 556 aa5.05□□□□□ -1.6
CHD1-209ENST00000512844 PLA2G4FQ68DD2 849 aa5.05□□□□□ -1.6
CHD1-209ENST00000512844 KLC3Q6P597 504 aa5.05□□□□□ -1.6
CHD1-209ENST00000512844 MEX3BQ6ZN04 569 aaKnown RBP5.05□□□□□ -1.6
CHD1-209ENST00000512844 INTS8Q75QN2 995 aaKnown RBP5.05□□□□□ -1.6
CHD1-209ENST00000512844 FOXP4Q8IVH2 680 aaPredicted RBP5.05□□□□□ -1.6
CHD1-209ENST00000512844 STPG4Q8N801 248 aa5.05□□□□□ -1.6
CHD1-209ENST00000512844 GPATCH11Q8N954 259 aa5.05□□□□□ -1.6
CHD1-209ENST00000512844 OR10V1Q8NGI7 309 aa5.05□□□□□ -1.6
CHD1-209ENST00000512844 TBC1D16Q8TBP0 767 aa5.05□□□□□ -1.6
CHD1-209ENST00000512844 ERLEC1Q96DZ1 483 aa5.05□□□□□ -1.6
CHD1-209ENST00000512844 TEX12Q9BXU0 123 aa5.05□□□□□ -1.6
CHD1-209ENST00000512844 GHITMQ9H3K2 345 aa5.05□□□□□ -1.6
CHD1-209ENST00000512844 PTTG2Q9NZH5 202 aa5.05□□□□□ -1.6
CHD1-209ENST00000512844 SEC63Q9UGP8 760 aaKnown RBP5.05□□□□□ -1.6
CHD1-209ENST00000512844 TCF20Q9UGU0 1960 aaKnown RBP5.04□□□□□ -1.6
CHD1-209ENST00000512844 LOC100509620A0A075B734 347 aa5.04□□□□□ -1.6
CHD1-209ENST00000512844 MED19A0JLT2 244 aaPredicted RBP5.04□□□□□ -1.6
CHD1-209ENST00000512844 PCDH7O60245 1069 aa5.04□□□□□ -1.6
CHD1-209ENST00000512844 LDLRP01130 860 aa5.04□□□□□ -1.6
CHD1-209ENST00000512844 CKMT2P17540 419 aa5.04□□□□□ -1.6
CHD1-209ENST00000512844 TCEA1P23193 301 aaKnown RBP5.04□□□□□ -1.6
CHD1-209ENST00000512844 HOXD13P35453 343 aa5.04□□□□□ -1.6
CHD1-209ENST00000512844 SPOCK1Q08629 439 aa5.04□□□□□ -1.6
CHD1-209ENST00000512844 IRF3Q14653 427 aa5.04□□□□□ -1.6
CHD1-209ENST00000512844 FAM98BQ52LJ0 330 aaKnown RBP5.04□□□□□ -1.6
CHD1-209ENST00000512844 GCNT6Q5T4J0 391 aa5.04□□□□□ -1.6
CHD1-209ENST00000512844 ALS2CLQ60I27 953 aa5.04□□□□□ -1.6
CHD1-209ENST00000512844 CLEC17AQ6ZS10 378 aa5.04□□□□□ -1.6
CHD1-209ENST00000512844 DGLUCYQ7Z3D6 616 aa5.04□□□□□ -1.6
CHD1-209ENST00000512844 GPALPP1Q8IXQ4 340 aa5.04□□□□□ -1.6
CHD1-209ENST00000512844 CIARTQ8N365 385 aaPredicted RBP5.04□□□□□ -1.6
CHD1-209ENST00000512844 POC5Q8NA72 575 aa5.04□□□□□ -1.6
CHD1-209ENST00000512844 PPFIBP2Q8ND30 876 aa5.04□□□□□ -1.6
CHD1-209ENST00000512844 ZNF473Q8WTR7 871 aaKnown RBP5.04□□□□□ -1.6
CHD1-209ENST00000512844 KIFC3Q9BVG8 833 aa5.04□□□□□ -1.6
CHD1-209ENST00000512844 CCDC68Q9H2F9 335 aa5.04□□□□□ -1.6
CHD1-209ENST00000512844 HHATLQ9HCP6 504 aa5.04□□□□□ -1.6
CHD1-209ENST00000512844 OLFML3Q9NRN5 406 aa5.04□□□□□ -1.6
CHD1-209ENST00000512844 NSMCE4AQ9NXX6 385 aa5.04□□□□□ -1.6
CHD1-209ENST00000512844 TBC1D29Q9UFV1 150 aa5.04□□□□□ -1.6
CHD1-209ENST00000512844 FBXO2Q9UK22 296 aaPredicted RBP5.04□□□□□ -1.6
CHD1-209ENST00000512844 GPR34Q9UPC5 381 aa5.04□□□□□ -1.6
CHD1-209ENST00000512844 A0A0U1RQG5 324 aaPredicted RBP5.03□□□□□ -1.6
CHD1-209ENST00000512844 hCG_1807616A0A1W2PRN6 198 aa5.03□□□□□ -1.6
CHD1-209ENST00000512844 IPO8O15397 1037 aaKnown RBP5.03□□□□□ -1.6
CHD1-209ENST00000512844 CIDEAO60543 219 aa5.03□□□□□ -1.6
CHD1-209ENST00000512844 AVILO75366 819 aa5.03□□□□□ -1.6
CHD1-209ENST00000512844 NRIP1P48552 1158 aa5.03□□□□□ -1.6
CHD1-209ENST00000512844 LMAN1P49257 510 aa5.03□□□□□ -1.6
CHD1-209ENST00000512844 MMP15P51511 669 aa5.03□□□□□ -1.6
CHD1-209ENST00000512844 EPS8Q12929 822 aa5.03□□□□□ -1.6
CHD1-209ENST00000512844 MFAP5Q13361 173 aa5.03□□□□□ -1.6
CHD1-209ENST00000512844 DLG2Q15700 870 aa5.03□□□□□ -1.6
CHD1-209ENST00000512844 NTRK2Q16620 822 aa5.03□□□□□ -1.6
CHD1-209ENST00000512844 C15orf59Q2T9L4 293 aaPredicted RBP5.03□□□□□ -1.6
CHD1-209ENST00000512844 RAB6CQ53S08 254 aa5.03□□□□□ -1.6
CHD1-209ENST00000512844 WDR78Q5VTH9 848 aa5.03□□□□□ -1.6
CHD1-209ENST00000512844 MARK2Q7KZI7 788 aaKnown RBP5.03□□□□□ -1.6
CHD1-209ENST00000512844 APPL2Q8NEU8 664 aa5.03□□□□□ -1.6
CHD1-209ENST00000512844 LRRC59Q96AG4 307 aaKnown RBP5.03□□□□□ -1.6
CHD1-209ENST00000512844 NSUN4Q96CB9 384 aaKnown RBP5.03□□□□□ -1.6
CHD1-209ENST00000512844 FAM81BQ96LP2 452 aa5.03□□□□□ -1.6
CHD1-209ENST00000512844 SLX1AQ9BQ83 275 aa5.03□□□□□ -1.6
CHD1-209ENST00000512844 RAB6CQ9H0N0 254 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms