RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 KIAA1191Q96A73 305 aa8.98□□□□□ -0.97
NR1I3-230ENST00000511944 AP2M1Q96CW1 435 aa8.98□□□□□ -0.97
NR1I3-230ENST00000511944 NUS1Q96E22 293 aa8.98□□□□□ -0.97
NR1I3-230ENST00000511944 DCUN1D1Q96GG9 259 aa8.98□□□□□ -0.97
NR1I3-230ENST00000511944 NDNQ99608 321 aa8.98□□□□□ -0.97
NR1I3-230ENST00000511944 SPATA16Q9BXB7 569 aa8.98□□□□□ -0.97
NR1I3-230ENST00000511944 ABCG8Q9H221 673 aa8.98□□□□□ -0.97
NR1I3-230ENST00000511944 MTG2Q9H4K7 406 aa8.98□□□□□ -0.97
NR1I3-230ENST00000511944 STN1Q9H668 368 aaKnown RBP8.98□□□□□ -0.97
NR1I3-230ENST00000511944 THAP1Q9NVV9 213 aa8.98□□□□□ -0.97
NR1I3-230ENST00000511944 OXSMQ9NWU1 459 aa8.98□□□□□ -0.97
NR1I3-230ENST00000511944 TMEM216Q9P0N5 145 aa8.98□□□□□ -0.97
NR1I3-230ENST00000511944 WNT16Q9UBV4 365 aa8.98□□□□□ -0.97
NR1I3-230ENST00000511944 HAO1Q9UJM8 370 aa8.98□□□□□ -0.97
NR1I3-230ENST00000511944 SORCS3Q9UPU3 1222 aa8.98□□□□□ -0.97
NR1I3-230ENST00000511944 TCF20Q9UGU0 1960 aaKnown RBP8.97□□□□□ -0.97
NR1I3-230ENST00000511944 TRIOBPQ9H2D6 2365 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 ADARB2-AS1A8MUL3 147 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 TCP11X1B4DZS4 312 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 G3V2L1 256 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 TOR1BO14657 336 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 MID1O15344 667 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 SNX3O60493 162 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 TRIM13O60858 407 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 KERAO60938 352 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 ADAM23O75077 832 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 ATG13O75143 517 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 RECQL5O94762 991 aaPredicted RBP8.97□□□□□ -0.97
NR1I3-230ENST00000511944 KLF8O95600 359 aaPredicted RBP8.97□□□□□ -0.97
NR1I3-230ENST00000511944 TSPAN12O95859 305 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 TROVE2P10155 538 aaKnown RBP eCLIP8.97□□□□□ -0.97
NR1I3-230ENST00000511944 NEFHP12036 1026 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 ATP1B2P14415 290 aaPredicted RBP8.97□□□□□ -0.97
NR1I3-230ENST00000511944 CD1DP15813 335 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 GM2AP17900 193 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 DGKAP23743 735 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 NUDT1P36639 197 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 ETV3P41162 512 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 ABCG1P45844 678 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 CDKN1CP49918 316 aaPredicted RBP8.97□□□□□ -0.97
NR1I3-230ENST00000511944 DGKEP52429 567 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 RPS21P63220 83 aaKnown RBP8.97□□□□□ -0.97
NR1I3-230ENST00000511944 IRF9Q00978 393 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 OCRLQ01968 901 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 CSHL1Q14406 222 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 ACOX1Q15067 660 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 PTPRRQ15256 657 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 SMAD1Q15797 465 aaKnown RBP8.97□□□□□ -0.97
NR1I3-230ENST00000511944 BCL7AQ4VC05 210 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 SETMARQ53H47 684 aaPredicted RBP8.97□□□□□ -0.97
NR1I3-230ENST00000511944 GPRC6AQ5T6X5 926 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 MICALCLQ6ZW33 695 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 PIGWQ7Z7B1 504 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 LDB1Q86U70 411 aaPredicted RBP8.97□□□□□ -0.97
NR1I3-230ENST00000511944 UBALD2Q8IYN6 164 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 LRRC34Q8IZ02 419 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 PLD6Q8N2A8 252 aaKnown RBP8.97□□□□□ -0.97
NR1I3-230ENST00000511944 CHCHD4Q8N4Q1 142 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 AADATQ8N5Z0 425 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 DENND6BQ8NEG7 585 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 PPP1R14CQ8TAE6 165 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 ZNF473Q8WTR7 871 aaKnown RBP8.97□□□□□ -0.97
NR1I3-230ENST00000511944 NXNL1Q96CM4 212 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 ASB2Q96Q27 587 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 PAIP2Q9BPZ3 127 aaKnown RBP8.97□□□□□ -0.97
NR1I3-230ENST00000511944 RIOK2Q9BVS4 552 aaKnown RBP8.97□□□□□ -0.97
NR1I3-230ENST00000511944 PITPNM3Q9BZ71 974 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 OSBPL6Q9BZF3 934 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 NCKIPSDQ9NZQ3 722 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 XPR1Q9UBH6 696 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 RUVBL2Q9Y230 463 aaKnown RBP8.97□□□□□ -0.97
NR1I3-230ENST00000511944 NCKAP1Q9Y2A7 1128 aa8.97□□□□□ -0.97
NR1I3-230ENST00000511944 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.97□□□□□ -0.97
NR1I3-230ENST00000511944 MYO9BQ13459 2157 aa8.96□□□□□ -0.97
NR1I3-230ENST00000511944 ELOA3CA0A087WX78 387 aaPredicted RBP8.96□□□□□ -0.98
NR1I3-230ENST00000511944 SHISA7A6NL88 538 aa8.96□□□□□ -0.98
NR1I3-230ENST00000511944 ELOA3DA6NLF2 546 aaPredicted RBP8.96□□□□□ -0.98
NR1I3-230ENST00000511944 C10orf142B7Z368 130 aa8.96□□□□□ -0.98
NR1I3-230ENST00000511944 NUAK1O60285 661 aa8.96□□□□□ -0.98
NR1I3-230ENST00000511944 OR1I1O60431 355 aa8.96□□□□□ -0.98
NR1I3-230ENST00000511944 NPHS1O60500 1241 aa8.96□□□□□ -0.98
NR1I3-230ENST00000511944 SMIM24O75264 130 aa8.96□□□□□ -0.98
NR1I3-230ENST00000511944 TM7SF2O76062 418 aa8.96□□□□□ -0.98
NR1I3-230ENST00000511944 IPO13O94829 963 aaKnown RBP8.96□□□□□ -0.98
NR1I3-230ENST00000511944 HOXC4P09017 264 aaPredicted RBP8.96□□□□□ -0.98
NR1I3-230ENST00000511944 ENO2P09104 434 aaPredicted RBP8.96□□□□□ -0.98
NR1I3-230ENST00000511944 PRSS56P0CW18 603 aa8.96□□□□□ -0.98
NR1I3-230ENST00000511944 TPBGLP0DKB5 382 aa8.96□□□□□ -0.98
NR1I3-230ENST00000511944 MPC1LP0DKB6 136 aa8.96□□□□□ -0.98
NR1I3-230ENST00000511944 FGF3P11487 239 aaPredicted RBP8.96□□□□□ -0.98
NR1I3-230ENST00000511944 UGT1A6P19224 532 aa8.96□□□□□ -0.98
NR1I3-230ENST00000511944 TFEBP19484 476 aa8.96□□□□□ -0.98
NR1I3-230ENST00000511944 CHRM3P20309 590 aa8.96□□□□□ -0.98
NR1I3-230ENST00000511944 MSH3P20585 1137 aa8.96□□□□□ -0.98
NR1I3-230ENST00000511944 SAT1P21673 171 aa8.96□□□□□ -0.98
NR1I3-230ENST00000511944 UGT1A1P22309 533 aa8.96□□□□□ -0.98
NR1I3-230ENST00000511944 UGT1A4P22310 534 aa8.96□□□□□ -0.98
NR1I3-230ENST00000511944 SP100P23497 879 aaPredicted RBP8.96□□□□□ -0.98
NR1I3-230ENST00000511944 UGT1A3P35503 534 aa8.96□□□□□ -0.98
NR1I3-230ENST00000511944 UGT1A5P35504 534 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms