RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 C20orf96Q9NUD7 363 aaPredicted RBP15.3■□□□□ 0.04
SH3TC1-220ENST00000511002 TRNAU1APQ9NX07 287 aaKnown RBP15.3■□□□□ 0.04
SH3TC1-220ENST00000511002 GPSM3Q9Y4H4 160 aa15.3■□□□□ 0.04
SH3TC1-220ENST00000511002 ENTPD2Q9Y5L3 495 aa15.3■□□□□ 0.04
SH3TC1-220ENST00000511002 AK5Q9Y6K8 562 aa15.3■□□□□ 0.04
SH3TC1-220ENST00000511002 RNF215Q9Y6U7 377 aa15.3■□□□□ 0.04
SH3TC1-220ENST00000511002 OR2AG2A6NM03 316 aa15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 NTN3O00634 580 aaPredicted RBP15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 CHUKO15111 745 aa15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 GRID2O43424 1007 aa15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 OR1I1O60431 355 aa15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 BRINP1O60477 761 aa15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 TTC4O95801 387 aa15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 MPOP05164 745 aa15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 ILF3Q12906 894 aaKnown RBP eCLIP15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 CUL1Q13616 776 aa15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 GTF2H3Q13889 308 aa15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 C14orf28Q4W4Y0 310 aa15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 NEPROQ6NW34 567 aa15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 TRMT10BQ6PF06 316 aaKnown RBP15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 CAPN12Q6ZSI9 719 aa15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 B3GNT8Q7Z7M8 397 aa15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 TRAPPC5Q8IUR0 188 aa15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 CCNJLQ8IV13 435 aa15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 ZNF547Q8IVP9 402 aa15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 GSPT2Q8IYD1 628 aaKnown RBP15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 NAGSQ8N159 534 aa15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 Q8N9G6 341 aaPredicted RBP15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 PYROXD1Q8WU10 500 aa15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 DCUN1D1Q96GG9 259 aa15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 ATXN7L3BQ96GX2 97 aa15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 C9orf72Q96LT7 481 aa15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 TTC25Q96NG3 672 aa15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 GSDMCQ9BYG8 508 aa15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 FAM129AQ9BZQ8 928 aa15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 RMI1Q9H9A7 625 aa15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 RRAGDQ9NQL2 400 aaPredicted RBP15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 MTRF1LQ9UGC7 380 aaKnown RBP15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 ZNHIT2Q9UHR6 403 aa15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 NFU1Q9UMS0 254 aa15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 V9GYY5 206 aaPredicted RBP15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 CFAP47Q6ZTR5 3102 aa15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 ZZEF1O43149 2961 aa15.29■□□□□ 0.04
SH3TC1-220ENST00000511002 GPR89AB7ZAQ6 455 aa15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 SGTAO43765 313 aa15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 EML2O95834 649 aa15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 RPLP0P05388 317 aaKnown RBP15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 GPR89BP0CG08 455 aa15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 ERVK-10P10266 1014 aa15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 ACP5P13686 325 aa15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 ACTR1BP42025 376 aa15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 MAGEA4P43358 317 aa15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 ACTR1AP61163 376 aa15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 THOC5Q13769 683 aaKnown RBP15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 ITIH4Q14624 930 aa15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 HSP90AA5PQ58FG0 334 aa15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 AARS2Q5JTZ9 985 aaKnown RBP15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 ZNF470Q6ECI4 717 aa15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 C19orf48Q6RUI8 117 aa15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 RBM44Q6ZP01 1051 aaKnown RBP15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 TMPRSS9Q7Z410 1059 aa15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 LRRTM4Q86VH4 590 aa15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 KCNMB4Q86W47 210 aa15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 C17orf82Q86X59 251 aaPredicted RBP15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 CLDN19Q8N6F1 224 aa15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 BEND7Q8N7W2 519 aaPredicted RBP15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 GPR150Q8NGU9 434 aa15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 ZDHHC1Q8WTX9 485 aa15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 SGF29Q96ES7 293 aa15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 CERS2Q96G23 380 aa15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 FMO2Q99518 471 aa15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 ANKZF1Q9H8Y5 726 aa15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 SLC17A6Q9P2U8 582 aa15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 LRIT1Q9P2V4 623 aa15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 ATXN7L1Q9ULK2 861 aaPredicted RBP15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 PRSS21Q9Y6M0 314 aa15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 PKD1L2Q7Z442 2459 aa15.28■□□□□ 0.04
SH3TC1-220ENST00000511002 ADAMTS20P59510 1910 aa15.27■□□□□ 0.04
SH3TC1-220ENST00000511002 CFAP99D6REC4 459 aa15.27■□□□□ 0.04
SH3TC1-220ENST00000511002 RALBP11234 206 aa15.27■□□□□ 0.04
SH3TC1-220ENST00000511002 GLB1P16278 677 aa15.27■□□□□ 0.04
SH3TC1-220ENST00000511002 SSTR1P30872 391 aa15.27■□□□□ 0.04
SH3TC1-220ENST00000511002 SLC1A2P43004 574 aa15.27■□□□□ 0.04
SH3TC1-220ENST00000511002 TTPAP49638 278 aa15.27■□□□□ 0.04
SH3TC1-220ENST00000511002 GABREP78334 506 aa15.27■□□□□ 0.04
SH3TC1-220ENST00000511002 SPIDRQ14159 915 aa15.27■□□□□ 0.04
SH3TC1-220ENST00000511002 TYSND1Q2T9J0 566 aa15.27■□□□□ 0.04
SH3TC1-220ENST00000511002 UBAP2Q5T6F2 1119 aaKnown RBP15.27■□□□□ 0.04
SH3TC1-220ENST00000511002 LYPLAL1Q5VWZ2 237 aa15.27■□□□□ 0.04
SH3TC1-220ENST00000511002 MRNIPQ6NTE8 343 aa15.27■□□□□ 0.04
SH3TC1-220ENST00000511002 TMEM220Q6QAJ8 160 aa15.27■□□□□ 0.04
SH3TC1-220ENST00000511002 PACS1Q6VY07 963 aa15.27■□□□□ 0.04
SH3TC1-220ENST00000511002 CERS6Q6ZMG9 384 aa15.27■□□□□ 0.04
SH3TC1-220ENST00000511002 CHST15Q7LFX5 561 aaPredicted RBP15.27■□□□□ 0.04
SH3TC1-220ENST00000511002 C11orf96Q7Z7L8 435 aa15.27■□□□□ 0.04
SH3TC1-220ENST00000511002 CILP2Q8IUL8 1156 aa15.27■□□□□ 0.04
SH3TC1-220ENST00000511002 DENND6AQ8IWF6 608 aa15.27■□□□□ 0.04
SH3TC1-220ENST00000511002 GSDMBQ8TAX9 411 aa15.27■□□□□ 0.04
SH3TC1-220ENST00000511002 HEXDCQ8WVB3 486 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms