RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 NAF1Q96HR8 494 aaKnown RBP13.29□□□□□ -0.28
SNF8-206ENST00000509989 C19orf43Q9BQ61 176 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 TRIM51Q9BSJ1 452 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 POLR1BQ9H9Y6 1135 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.29□□□□□ -0.28
SNF8-206ENST00000509989 DKK4Q9UBT3 224 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 ITPR1Q14643 2758 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 CCDC187A0A096LP49 1063 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 KIR2DS5A0A0G2JLQ3 304 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 A0A0G2JNG1 304 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 IQCF5A8MTL0 148 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 KIR2DS3K7RE56 304 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 TNFSF15O95150 251 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 CCKBRP32239 447 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 GPR3P46089 330 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 LEPRP48357 1165 aaKnown RBP13.28□□□□□ -0.28
SNF8-206ENST00000509989 NPY2RP49146 381 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 KIR2DS5Q14953 304 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 BRD3Q15059 726 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 MSS51Q4VC12 460 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 ZNF789Q5FWF6 425 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 RNASEH2BQ5TBB1 312 aaKnown RBP13.28□□□□□ -0.28
SNF8-206ENST00000509989 AGAP9Q5VTM2 703 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 C4orf22Q6V702 233 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 WASH2PQ6VEQ5 465 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 TMEM26Q6ZUK4 368 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 RAB11FIP2Q7L804 512 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 PIM3Q86V86 326 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 UNC5BQ8IZJ1 945 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 OR4L1Q8NH43 312 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 NCSTNQ92542 709 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 DCUN1D1Q96GG9 259 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 LINC00615Q96LM1 132 aaPredicted RBP13.28□□□□□ -0.28
SNF8-206ENST00000509989 SERPINB12Q96P63 405 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 DCBLD2Q96PD2 775 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 KIFC1Q9BW19 673 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 ZCCHC2Q9C0B9 1178 aaKnown RBP13.28□□□□□ -0.28
SNF8-206ENST00000509989 SLC40A1Q9NP59 571 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 WASH6PQ9NQA3 447 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 KCND1Q9NSA2 647 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 OCIAD1Q9NX40 245 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 PISDQ9UG56 409 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 KLHL3Q9UH77 587 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 RIMKLBQ9ULI2 386 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 LOXL2Q9Y4K0 774 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 SAR1BQ9Y6B6 198 aa13.28□□□□□ -0.28
SNF8-206ENST00000509989 TMEM8BA6NDV4 472 aa13.27□□□□□ -0.29
SNF8-206ENST00000509989 KIF1CO43896 1103 aaKnown RBP13.27□□□□□ -0.29
SNF8-206ENST00000509989 VIPP01282 170 aa13.27□□□□□ -0.29
SNF8-206ENST00000509989 THRAP10827 490 aa13.27□□□□□ -0.29
SNF8-206ENST00000509989 EIF2S3P41091 472 aaKnown RBP13.27□□□□□ -0.29
SNF8-206ENST00000509989 FNTAP49354 379 aa13.27□□□□□ -0.29
SNF8-206ENST00000509989 LIMK2P53671 638 aa13.27□□□□□ -0.29
SNF8-206ENST00000509989 CSE1LP55060 971 aaKnown RBP13.27□□□□□ -0.29
SNF8-206ENST00000509989 SRSF6Q13247 344 aaKnown RBP13.27□□□□□ -0.29
SNF8-206ENST00000509989 CAPRIN2Q6IMN6 1127 aaKnown RBP13.27□□□□□ -0.29
SNF8-206ENST00000509989 AFTPHQ6ULP2 937 aa13.27□□□□□ -0.29
SNF8-206ENST00000509989 SYT10Q6XYQ8 523 aa13.27□□□□□ -0.29
SNF8-206ENST00000509989 KRT222Q8N1A0 295 aa13.27□□□□□ -0.29
SNF8-206ENST00000509989 FBXO39Q8N4B4 442 aa13.27□□□□□ -0.29
SNF8-206ENST00000509989 PHC3Q8NDX5 983 aa13.27□□□□□ -0.29
SNF8-206ENST00000509989 WDR36Q8NI36 951 aaKnown RBP13.27□□□□□ -0.29
SNF8-206ENST00000509989 WDR48Q8TAF3 677 aa13.27□□□□□ -0.29
SNF8-206ENST00000509989 HNRNPLLQ8WVV9 542 aaKnown RBP13.27□□□□□ -0.29
SNF8-206ENST00000509989 CXorf40BQ96DE9 158 aa13.27□□□□□ -0.29
SNF8-206ENST00000509989 LIN37Q96GY3 246 aaPredicted RBP13.27□□□□□ -0.29
SNF8-206ENST00000509989 SIGLEC10Q96LC7 697 aa13.27□□□□□ -0.29
SNF8-206ENST00000509989 C12orf66Q96MD2 445 aa13.27□□□□□ -0.29
SNF8-206ENST00000509989 SLC46A1Q96NT5 459 aa13.27□□□□□ -0.29
SNF8-206ENST00000509989 NAP1L3Q99457 506 aaPredicted RBP13.27□□□□□ -0.29
SNF8-206ENST00000509989 CCM2Q9BSQ5 444 aa13.27□□□□□ -0.29
SNF8-206ENST00000509989 OR52A5Q9H2C5 316 aa13.27□□□□□ -0.29
SNF8-206ENST00000509989 COG4Q9H9E3 785 aa13.27□□□□□ -0.29
SNF8-206ENST00000509989 IMP3Q9NV31 184 aaKnown RBP13.27□□□□□ -0.29
SNF8-206ENST00000509989 BFARQ9NZS9 450 aa13.27□□□□□ -0.29
SNF8-206ENST00000509989 SOX13Q9UN79 622 aa13.27□□□□□ -0.29
SNF8-206ENST00000509989 DNMT3AQ9Y6K1 912 aaPredicted RBP13.27□□□□□ -0.29
SNF8-206ENST00000509989 SPTBP11277 2137 aa13.27□□□□□ -0.29
SNF8-206ENST00000509989 AHCTF1Q8WYP5 2266 aa13.27□□□□□ -0.29
SNF8-206ENST00000509989 PTPRQQ9UMZ3 2332 aa13.27□□□□□ -0.29
SNF8-206ENST00000509989 NBEAQ8NFP9 2946 aa13.26□□□□□ -0.29
SNF8-206ENST00000509989 CTAGE9A4FU28 777 aa13.26□□□□□ -0.29
SNF8-206ENST00000509989 OR5K4A6NMS3 321 aa13.26□□□□□ -0.29
SNF8-206ENST00000509989 CDRT15L2A8MXV6 281 aa13.26□□□□□ -0.29
SNF8-206ENST00000509989 PLD2O14939 933 aa13.26□□□□□ -0.29
SNF8-206ENST00000509989 TP73O15350 636 aa13.26□□□□□ -0.29
SNF8-206ENST00000509989 CD3EAPO15446 510 aaKnown RBP13.26□□□□□ -0.29
SNF8-206ENST00000509989 TTI1O43156 1089 aa13.26□□□□□ -0.29
SNF8-206ENST00000509989 VAPBO95292 243 aa13.26□□□□□ -0.29
SNF8-206ENST00000509989 FGF3P11487 239 aaPredicted RBP13.26□□□□□ -0.29
SNF8-206ENST00000509989 MTHFD1P11586 935 aaKnown RBP13.26□□□□□ -0.29
SNF8-206ENST00000509989 MAGEA3P43357 314 aa13.26□□□□□ -0.29
SNF8-206ENST00000509989 ARCN1P48444 511 aaKnown RBP13.26□□□□□ -0.29
SNF8-206ENST00000509989 PPM1FP49593 454 aaPredicted RBP13.26□□□□□ -0.29
SNF8-206ENST00000509989 MAPK10P53779 464 aa13.26□□□□□ -0.29
SNF8-206ENST00000509989 SQSTM1Q13501 440 aa13.26□□□□□ -0.29
SNF8-206ENST00000509989 PTK6Q13882 451 aa13.26□□□□□ -0.29
SNF8-206ENST00000509989 PPP1R7Q15435 360 aa13.26□□□□□ -0.29
SNF8-206ENST00000509989 TBC1D25Q3MII6 688 aa13.26□□□□□ -0.29
SNF8-206ENST00000509989 FBXO38Q6PIJ6 1188 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms