RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, human

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFKB1-208	ENST00000509165	MMP2	P08253	660 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	CSF2RA	P15509	400 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	CD58	P19256	250 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	KCNA5	P22460	613 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	SHMT1	P34896	483 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	GGT5	P36269	586 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	NBL1	P41271	181 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	BTD	P43251	543 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	UFM1	P61960	85 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	GALNT2	Q10471	571 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	ITGAD	Q13349	1161 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	BIRC3	Q13489	604 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	TRPC3	Q13507	836 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	RNPS1	Q15287	305 aa	Known RBP	4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	OASL	Q15646	514 aa	Known RBP	4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	CALCRL	Q16602	461 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	BAK1	Q16611	211 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	TMEM95	Q3KNT9	176 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	ZNF718	Q3SXZ3	478 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	AMZ1	Q400G9	498 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	ZNF672	Q499Z4	452 aa	Predicted RBP	4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	PAPPA-AS1	Q5QFB9	102 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	GORAB	Q5T7V8	394 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	NAA16	Q6N069	864 aa	Predicted RBP	4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	B3GNT6	Q6ZMB0	384 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	ZNF771	Q7L3S4	317 aa	Predicted RBP	4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	DZIP1	Q86YF9	867 aa	Known RBP	4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	FOXRED2	Q8IWF2	684 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	SLC35F3	Q8IY50	421 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	RFLNB	Q8N5W9	214 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	WFIKKN2	Q8TEU8	576 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	CREB3L4	Q8TEY5	395 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	DNASE2B	Q8WZ79	361 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	FBXL8	Q96CD0	374 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	ZNF385A	Q96PM9	386 aa	Known RBP	4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	CSF3R	Q99062	836 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	HAUS8	Q9BT25	410 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	KCNN2	Q9H2S1	579 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	TXLNG	Q9NUQ3	528 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	TBX21	Q9UL17	535 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	TBX20	Q9UMR3	447 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	ZHX2	Q9Y6X8	837 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	MYH4	Q9Y623	1939 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	ANKRD17	O75179	2603 aa	Known RBP	4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	LOC400499	M0QZD8	3231 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	TET1	Q8NFU7	2136 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	RRN3P2	A6NIE6	340 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	LDLRAD4	O15165	306 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	RNF113A	O15541	343 aa	Known RBP	4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	EIF5B	O60841	1220 aa	Known RBP	4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	FRAT2	O75474	233 aa	Predicted RBP	4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	IDH1	O75874	414 aa	Known RBP	4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	TIMP1	P01033	207 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	CA3	P07451	260 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	LINC00271	P0C7V0	271 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	COX7A2	P14406	83 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	MT3	P25713	68 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	POU1F1	P28069	291 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	NOV	P48745	357 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	DYNLL1	P63167	89 aa	Known RBP	4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	ZNF155	Q12901	538 aa	Predicted RBP	4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	FOXD4	Q12950	439 aa	Predicted RBP	4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	VEPH1	Q14D04	833 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	ZRSR1	Q15695	479 aa	Known RBP	4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	ALX1	Q15699	326 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	MMEL1	Q495T6	779 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	SLC9B1	Q4ZJI4	515 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	SBK1	Q52WX2	424 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	HERC4	Q5GLZ8	1057 aa	Predicted RBP	4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	SLC9C2	Q5TAH2	1124 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	TATDN1	Q6P1N9	297 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	FASTKD5	Q7L8L6	764 aa	Known RBP	4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	SCCPDH	Q8NBX0	429 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	ARNTL2	Q8WYA1	636 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	EVI5L	Q96CN4	794 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	HVCN1	Q96D96	273 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	APOPT1	Q96IL0	206 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	IL17F	Q96PD4	163 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	BBS4	Q96RK4	519 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	PORCN	Q9H237	461 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	BOLA2	Q9H3K6	86 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	MAGEE1	Q9HCI5	957 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	PPP1R14D	Q9NXH3	145 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	SMARCAL1	Q9NZC9	954 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	RAI14	Q9P0K7	980 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	TINAG	Q9UJW2	476 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	AGTPBP1	Q9UPW5	1226 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	LSM4	Q9Y4Z0	139 aa	Known RBP	4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	STON1	Q9Y6Q2	735 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	ZNF236	Q9UL36	1845 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	AKAP13	Q12802	2813 aa		4.06	□□□□□ -1.76
NFKB1-208	ENST00000509165	ATG2A	Q2TAZ0	1938 aa		4.05	□□□□□ -1.76
NFKB1-208	ENST00000509165	PIEZO2	Q9H5I5	2752 aa		4.05	□□□□□ -1.76
NFKB1-208	ENST00000509165	UMODL1	Q5DID0	1318 aa		4.05	□□□□□ -1.76
NFKB1-208	ENST00000509165	RAD50	Q92878	1312 aa		4.05	□□□□□ -1.76
NFKB1-208	ENST00000509165	DMXL2	Q8TDJ6	3036 aa		4.05	□□□□□ -1.76
NFKB1-208	ENST00000509165	SAA2-SAA4	A0A096LPE2	208 aa		4.05	□□□□□ -1.76
NFKB1-208	ENST00000509165		A0A0D9SFI3	127 aa		4.05	□□□□□ -1.76
NFKB1-208	ENST00000509165	TEX13C	A0A0J9YWL9	993 aa		4.05	□□□□□ -1.76
NFKB1-208	ENST00000509165	KBTBD13	C9JR72	458 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms