RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 ERVK-21P61565 698 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 ATP2C1P98194 919 aaPredicted RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 PTSQ03393 145 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 DYRK1AQ13627 763 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 IFI16Q16666 785 aaKnown RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 RIPPLY2Q5TAB7 128 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 HLA-DQA1Q5Y7H0 255 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 ZNF551Q7Z340 670 aaPredicted RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 TRIM48Q8IWZ4 208 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 FBXL6Q8N531 539 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 TRPV3Q8NET8 790 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 TANKQ92844 425 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 ECHDC3Q96DC8 303 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 DYDC2Q96IM9 177 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 DGAT2Q96PD7 388 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 PKP2Q99959 881 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 HAUS8Q9BT25 410 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 NUDT9Q9BW91 350 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 NPLQ9BXD5 320 aaPredicted RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 CACNG6Q9BXT2 260 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 ING2Q9H160 280 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 NANSQ9NR45 359 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 MTMR4Q9NYA4 1195 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 NSG2Q9Y328 171 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 PCDHGC4Q9Y5F7 938 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 PITPNM2Q9BZ72 1349 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 ZNF236Q9UL36 1845 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 GNB5O14775 395 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 TNFRSF10CO14798 259 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 CHUKO15111 745 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 LILRB5O75023 590 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 SEC24DO94855 1032 aaPredicted RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 GBAP04062 536 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 ACRP10323 421 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 ACADSP16219 412 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 PTPN1P18031 435 aaKnown RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 KCNA3P22001 575 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 TKTP29401 623 aaKnown RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 CASRP41180 1078 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 HNRNPFP52597 415 aaKnown RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 EPHA4P54764 986 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 CD81P60033 236 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 SMN1Q16637 294 aaKnown RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 TRAT1Q6PIZ9 186 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 SPATA2LQ8IUW3 424 aaPredicted RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 BLIDQ8IZY5 108 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 CERS5Q8N5B7 392 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 NUP43Q8NFH3 380 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 MMABQ96EY8 250 aaPredicted RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 FCRL3Q96P31 734 aaPredicted RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 RBM15Q96T37 977 aaKnown RBP eCLIP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 TMEM121BQ9BXQ6 578 aaPredicted RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 OSBPL1AQ9BXW6 950 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 RTN4RQ9BZR6 473 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 NXF5Q9H1B4 397 aaKnown RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 RMND5AQ9H871 391 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 PRDM8Q9NQV8 689 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 FAM120CQ9NX05 1096 aaKnown RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 COLEC10Q9Y6Z7 277 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 H3BM21 787 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 CAPN5O15484 640 aaPredicted RBP3.87□□□□□ -1.79
NEDD4-209ENST00000508871 MSCO60682 206 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 SOCS5O75159 536 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 DKK1O94907 266 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 UBOX5O94941 541 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 GH1P01241 217 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 APOEP02649 317 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 F7P08709 466 aaPredicted RBP3.87□□□□□ -1.79
NEDD4-209ENST00000508871 PNMTP11086 282 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 ITGAXP20702 1163 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 ITPKAP23677 461 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 SHMT1P34896 483 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 OR3A3P47888 321 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 OR3A2P47893 321 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 OAZ1P54368 228 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 SNRPEP62304 92 aaKnown RBP3.87□□□□□ -1.79
NEDD4-209ENST00000508871 RAC1P63000 192 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 DMWDQ09019 674 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 HSPB3Q12988 150 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 NEDD9Q14511 834 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 NOLC1Q14978 699 aaKnown RBP eCLIP3.87□□□□□ -1.79
NEDD4-209ENST00000508871 MTFR1Q15390 333 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 EXOC3L4Q17RC7 722 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 NADK2Q4G0N4 442 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 TMEM26Q6ZUK4 368 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 FRMD5Q7Z6J6 570 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 CROCCP2Q86T23 111 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 TLK2Q86UE8 772 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 VWA5B2Q8N398 1253 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 SLC25A36Q96CQ1 311 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 NSL1Q96IY1 281 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 ZIC5Q96T25 663 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 TMEM47Q9BQJ4 181 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 STRA6Q9BX79 667 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 ACPTQ9BZG2 426 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 DPEP2Q9H4A9 486 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 RXFP1Q9HBX9 757 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 TUBE1Q9UJT0 475 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 SPATA2Q9UM82 520 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 COLQQ9Y215 455 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms