RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 MED22Q15528 200 aa4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 NCEH1Q6PIU2 408 aa4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 C15orf39Q6ZRI6 1047 aa4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 MMS22LQ6ZRQ5 1243 aa4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 CPLX4Q7Z7G2 160 aa4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 CCDC190Q86UF4 302 aa4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 RDM1Q8NG50 284 aa4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 TRPC4APQ8TEL6 797 aa4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 TMEM190Q8WZ59 177 aa4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 ZKSCAN4Q969J2 545 aaPredicted RBP4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 SENP5Q96HI0 755 aaPredicted RBP4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 C1orf74Q96LT6 269 aa4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 RRP7BPQ9NSQ0 103 aa4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 JRKLQ9Y4A0 524 aa4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 PIAS3Q9Y6X2 628 aa4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 ARHGAP5Q13017 1502 aa4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 MAP3K1Q13233 1512 aa4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 PLXNC1O60486 1568 aa4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 IQGAP1P46940 1657 aa4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 ZC3H13Q5T200 1668 aaKnown RBP4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 ITSN2Q9NZM3 1697 aa4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 SMAD9O15198 467 aaKnown RBP4.85□□□□□ -1.63
TOPBP1-206ENST00000508524 NR3C1P04150 777 aa4.85□□□□□ -1.63
TOPBP1-206ENST00000508524 LIPFP07098 398 aa4.85□□□□□ -1.63
TOPBP1-206ENST00000508524 PIK3CAP42336 1068 aa4.85□□□□□ -1.63
TOPBP1-206ENST00000508524 HSD17B4P51659 736 aa4.85□□□□□ -1.63
TOPBP1-206ENST00000508524 TFAP4Q01664 338 aa4.85□□□□□ -1.63
TOPBP1-206ENST00000508524 MVPQ14764 893 aaKnown RBP4.85□□□□□ -1.63
TOPBP1-206ENST00000508524 GORABQ5T7V8 394 aa4.85□□□□□ -1.63
TOPBP1-206ENST00000508524 FAM53AQ6NSI3 398 aaPredicted RBP4.85□□□□□ -1.63
TOPBP1-206ENST00000508524 PACS1Q6VY07 963 aa4.85□□□□□ -1.63
TOPBP1-206ENST00000508524 C1orf52Q8N6N3 182 aaKnown RBP4.85□□□□□ -1.63
TOPBP1-206ENST00000508524 HJURPQ8NCD3 748 aaPredicted RBP4.85□□□□□ -1.63
TOPBP1-206ENST00000508524 PPP4R1Q8TF05 950 aa4.85□□□□□ -1.63
TOPBP1-206ENST00000508524 ZNF473Q8WTR7 871 aaKnown RBP4.85□□□□□ -1.63
TOPBP1-206ENST00000508524 ARHGEF2Q92974 986 aaKnown RBP4.85□□□□□ -1.63
TOPBP1-206ENST00000508524 SLC26A6Q9BXS9 759 aa4.85□□□□□ -1.63
TOPBP1-206ENST00000508524 ZBTB20Q9HC78 741 aaPredicted RBP4.85□□□□□ -1.63
TOPBP1-206ENST00000508524 EHD2Q9NZN4 543 aa4.85□□□□□ -1.63
TOPBP1-206ENST00000508524 DEPDC5O75140 1603 aa4.85□□□□□ -1.63
TOPBP1-206ENST00000508524 COL16A1Q07092 1604 aaPredicted RBP4.85□□□□□ -1.63
TOPBP1-206ENST00000508524 SAMD9LQ8IVG5 1584 aa4.84□□□□□ -1.63
TOPBP1-206ENST00000508524 CDK12Q9NYV4 1490 aaPredicted RBP4.84□□□□□ -1.63
TOPBP1-206ENST00000508524 TNRQ92752 1358 aa4.84□□□□□ -1.63
TOPBP1-206ENST00000508524 H0YIN7 160 aa4.84□□□□□ -1.63
TOPBP1-206ENST00000508524 SCAMP1O15126 338 aa4.84□□□□□ -1.63
TOPBP1-206ENST00000508524 SYNCRIPO60506 623 aaKnown RBP4.84□□□□□ -1.63
TOPBP1-206ENST00000508524 ZNF217O75362 1048 aa4.84□□□□□ -1.63
TOPBP1-206ENST00000508524 KRT19P08727 400 aa4.84□□□□□ -1.63
TOPBP1-206ENST00000508524 HSPA1AP0DMV8 641 aaKnown RBP4.84□□□□□ -1.63
TOPBP1-206ENST00000508524 HSPA1BP0DMV9 641 aaKnown RBP4.84□□□□□ -1.63
TOPBP1-206ENST00000508524 PSMA4P25789 261 aaKnown RBP4.84□□□□□ -1.63
TOPBP1-206ENST00000508524 CHRNB4P30926 498 aa4.84□□□□□ -1.63
TOPBP1-206ENST00000508524 GALCP54803 685 aa4.84□□□□□ -1.63
TOPBP1-206ENST00000508524 SPOCK1Q08629 439 aa4.84□□□□□ -1.63
TOPBP1-206ENST00000508524 ALFQ53S48 1182 aa4.84□□□□□ -1.63
TOPBP1-206ENST00000508524 TMTC3Q6ZXV5 915 aa4.84□□□□□ -1.63
TOPBP1-206ENST00000508524 PAF1Q8N7H5 531 aa4.84□□□□□ -1.63
TOPBP1-206ENST00000508524 ADAD2Q8NCV1 583 aaKnown RBP4.84□□□□□ -1.63
TOPBP1-206ENST00000508524 TDRD7Q8NHU6 1098 aaKnown RBP4.84□□□□□ -1.63
TOPBP1-206ENST00000508524 LRR1Q96L50 414 aa4.84□□□□□ -1.63
TOPBP1-206ENST00000508524 C7orf26Q96N11 449 aa4.84□□□□□ -1.63
TOPBP1-206ENST00000508524 BICC1Q9H694 974 aaKnown RBP4.84□□□□□ -1.63
TOPBP1-206ENST00000508524 APOBEC3GQ9HC16 384 aaKnown RBP4.84□□□□□ -1.63
TOPBP1-206ENST00000508524 SETD4Q9NVD3 440 aa4.84□□□□□ -1.63
TOPBP1-206ENST00000508524 ADPRHL2Q9NX46 363 aa4.84□□□□□ -1.63
TOPBP1-206ENST00000508524 RCC2Q9P258 522 aaKnown RBP4.84□□□□□ -1.63
TOPBP1-206ENST00000508524 KCNK7Q9Y2U2 307 aa4.84□□□□□ -1.63
TOPBP1-206ENST00000508524 CDC42BPBQ9Y5S2 1711 aa4.83□□□□□ -1.64
TOPBP1-206ENST00000508524 JCADQ9P266 1359 aa4.83□□□□□ -1.64
TOPBP1-206ENST00000508524 LIPT2A6NK58 231 aa4.83□□□□□ -1.64
TOPBP1-206ENST00000508524 TBX18O95935 607 aa4.83□□□□□ -1.64
TOPBP1-206ENST00000508524 CD48P09326 243 aa4.83□□□□□ -1.64
TOPBP1-206ENST00000508524 RNF224P0DH78 156 aa4.83□□□□□ -1.64
TOPBP1-206ENST00000508524 GNB3P16520 340 aa4.83□□□□□ -1.64
TOPBP1-206ENST00000508524 ANXA7P20073 488 aaKnown RBP4.83□□□□□ -1.64
TOPBP1-206ENST00000508524 KRT9P35527 623 aa4.83□□□□□ -1.64
TOPBP1-206ENST00000508524 MMP15P51511 669 aa4.83□□□□□ -1.64
TOPBP1-206ENST00000508524 GPR143P51810 404 aa4.83□□□□□ -1.64
TOPBP1-206ENST00000508524 CD81P60033 236 aa4.83□□□□□ -1.64
TOPBP1-206ENST00000508524 LRMPQ12912 555 aa4.83□□□□□ -1.64
TOPBP1-206ENST00000508524 DUOXA1Q1HG43 343 aa4.83□□□□□ -1.64
TOPBP1-206ENST00000508524 PXKQ7Z7A4 578 aa4.83□□□□□ -1.64
TOPBP1-206ENST00000508524 HACE1Q8IYU2 909 aa4.83□□□□□ -1.64
TOPBP1-206ENST00000508524 ELMOD3Q96FG2 381 aa4.83□□□□□ -1.64
TOPBP1-206ENST00000508524 MOV10L1Q9BXT6 1211 aaKnown RBP4.83□□□□□ -1.64
TOPBP1-206ENST00000508524 TRMT1Q9NXH9 659 aaKnown RBP4.83□□□□□ -1.64
TOPBP1-206ENST00000508524 C2CD2Q9Y426 696 aa4.83□□□□□ -1.64
TOPBP1-206ENST00000508524 YIPF1Q9Y548 306 aa4.83□□□□□ -1.64
TOPBP1-206ENST00000508524 TMEM94Q12767 1356 aa4.82□□□□□ -1.64
TOPBP1-206ENST00000508524 TEX13DA0A0J9YY54 714 aaPredicted RBP4.82□□□□□ -1.64
TOPBP1-206ENST00000508524 A0A1B0GU03 582 aa4.82□□□□□ -1.64
TOPBP1-206ENST00000508524 TMEM8BA6NDV4 472 aa4.82□□□□□ -1.64
TOPBP1-206ENST00000508524 B4E171 279 aa4.82□□□□□ -1.64
TOPBP1-206ENST00000508524 OGG1O15527 345 aa4.82□□□□□ -1.64
TOPBP1-206ENST00000508524 BMP10O95393 424 aa4.82□□□□□ -1.64
TOPBP1-206ENST00000508524 HIST1H2ABP04908 130 aa4.82□□□□□ -1.64
TOPBP1-206ENST00000508524 CDH2P19022 906 aaPredicted RBP4.82□□□□□ -1.64
TOPBP1-206ENST00000508524 HIST1H2ADP20671 130 aa4.82□□□□□ -1.64
TOPBP1-206ENST00000508524 TSPAN7P41732 249 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms