RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 SCAMP1O15126 338 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 IPO8O15397 1037 aaKnown RBP4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 DIAPH2O60879 1101 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 CRLF1O75462 422 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 NKX2-2O95096 273 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 OR2C1O95371 312 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 SLU7O95391 586 aaKnown RBP4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 SRPRAP08240 638 aaKnown RBP4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 IL7RP16871 459 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 MUTP22033 750 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 CAMPP49913 170 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 DVL1P1P54792 670 aaPredicted RBP4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 LMO4P61968 165 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 PITX1P78337 314 aaPredicted RBP4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 KRT83P78385 493 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 TFAP4Q01664 338 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 COL28A1Q2UY09 1125 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 EIF2S3LQ2VIR3 472 aaKnown RBP4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 ODF2Q5BJF6 829 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 ADALQ6DHV7 355 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 KIAA0930Q6ICG6 404 aaPredicted RBP4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 ANKRD54Q6NXT1 300 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 IL27RAQ6UWB1 636 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 GLDNQ6ZMI3 551 aaPredicted RBP4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 CHST3Q7LGC8 479 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 LINC00346Q8IVM7 164 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 CEP97Q8IW35 865 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 CHERPQ8IWX8 916 aaKnown RBP4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 ODF3L1Q8IXM7 274 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 THNSL1Q8IYQ7 743 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 GOT1L1Q8NHS2 421 aaPredicted RBP4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 ALG14Q96F25 216 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 RAB3IPQ96QF0 476 aaPredicted RBP4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 MTERF1Q99551 399 aaKnown RBP4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 EGFL8Q99944 293 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 CCDC106Q9BWC9 280 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 EDEM3Q9BZQ6 932 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 PPP1R3EQ9H7J1 279 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 FAM118AQ9NWS6 357 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 OGFRQ9NZT2 677 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 MARCH4Q9P2E8 410 aaPredicted RBP4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 CNOT8Q9UFF9 292 aaKnown RBP4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 GTF3C4Q9UKN8 822 aa4.05□□□□□ -1.76
TRAPPC13-209ENST00000508304 GLOD5A6NK44 160 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 A8MZ25 164 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 TBX10O75333 385 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 AVILO75366 819 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 TPPPO94811 219 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 CSPG5O95196 566 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 CCDC175P0C221 793 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 HLA-DOBP13765 273 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 SELLP14151 372 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 GABRB1P18505 474 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 ZNF10P21506 573 aaPredicted RBP4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 CDAP32320 146 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 FOXM1Q08050 763 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 CAMK2DQ13557 499 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 SCARB2Q14108 478 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 FGFBP1Q14512 234 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 CDC37Q16543 378 aaPredicted RBP4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 C2orf68Q2NKX9 166 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 C15orf59Q2T9L4 293 aaPredicted RBP4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 PDSS1Q5T2R2 415 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 ERMARDQ5T6L9 678 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 SIGIRRQ6IA17 410 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 PET117Q6UWS5 81 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 CCDC186Q7Z3E2 898 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 ADGRA1Q86SQ6 560 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 KBTBD6Q86V97 674 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 METTL23Q86XA0 190 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 WDR63Q8IWG1 891 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 SPAG16Q8N0X2 631 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 BBS10Q8TAM1 723 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 MRPS27Q92552 414 aaKnown RBP4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 SECISBP2LQ93073 1101 aaKnown RBP4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 PTERQ96BW5 349 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 ELMOD3Q96FG2 381 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 PGAP3Q96FM1 320 aaPredicted RBP4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 HARBI1Q96MB7 349 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 C17orf77Q96MU5 243 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 ZNF599Q96NL3 588 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 CITED2Q99967 270 aaPredicted RBP4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 FAM110AQ9BQ89 295 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 SRSF8Q9BRL6 282 aaKnown RBP4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 LRRC1Q9BTT6 524 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 KIFC3Q9BVG8 833 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 HRH4Q9H3N8 390 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 PLK3Q9H4B4 646 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 RALYQ9UKM9 306 aaKnown RBP4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 SNX5Q9Y5X3 404 aa4.04□□□□□ -1.76
TRAPPC13-209ENST00000508304 RPGRIP1LQ68CZ1 1315 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 FAM237AA0A1B0GTK4 181 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 ARHGEF37A1IGU5 675 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 H3BQ06 376 aaPredicted RBP4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 WDR46O15213 610 aaKnown RBP4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 TGDSO95455 350 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 ZNF182P17025 639 aaPredicted RBP4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 S1PR1P21453 382 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 ATP6V1E1P36543 226 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 EFNA5P52803 228 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms