RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 CHRNB4P30926 498 aa4.61□□□□□ -1.67
DHFR-204ENST00000508282 HOXA13P31271 388 aaPredicted RBP4.61□□□□□ -1.67
DHFR-204ENST00000508282 CDH8P55286 799 aa4.61□□□□□ -1.67
DHFR-204ENST00000508282 GNB1P62873 340 aa4.61□□□□□ -1.67
DHFR-204ENST00000508282 DDX10Q13206 875 aaKnown RBP4.61□□□□□ -1.67
DHFR-204ENST00000508282 CRYMQ14894 314 aa4.61□□□□□ -1.67
DHFR-204ENST00000508282 FAM180BQ6P0A1 224 aa4.61□□□□□ -1.67
DHFR-204ENST00000508282 TMEM154Q6P9G4 183 aa4.61□□□□□ -1.67
DHFR-204ENST00000508282 CHST9Q7L1S5 443 aa4.61□□□□□ -1.67
DHFR-204ENST00000508282 NOTCH2NLQ7Z3S9 236 aa4.61□□□□□ -1.67
DHFR-204ENST00000508282 CTCFLQ8NI51 663 aaPredicted RBP4.61□□□□□ -1.67
DHFR-204ENST00000508282 SCFD2Q8WU76 684 aa4.61□□□□□ -1.67
DHFR-204ENST00000508282 TMEM190Q8WZ59 177 aa4.61□□□□□ -1.67
DHFR-204ENST00000508282 SLC22A12Q96S37 553 aa4.61□□□□□ -1.67
DHFR-204ENST00000508282 SRSF8Q9BRL6 282 aaKnown RBP4.61□□□□□ -1.67
DHFR-204ENST00000508282 HGH1Q9BTY7 390 aa4.61□□□□□ -1.67
DHFR-204ENST00000508282 SEPT11Q9NVA2 429 aaKnown RBP4.61□□□□□ -1.67
DHFR-204ENST00000508282 ADPRHL2Q9NX46 363 aa4.61□□□□□ -1.67
DHFR-204ENST00000508282 DNAJB4Q9UDY4 337 aa4.61□□□□□ -1.67
DHFR-204ENST00000508282 LAS1LQ9Y4W2 734 aaKnown RBP4.61□□□□□ -1.67
DHFR-204ENST00000508282 A0A1W2PR77 199 aa4.6□□□□□ -1.67
DHFR-204ENST00000508282 SLC22A2O15244 555 aa4.6□□□□□ -1.67
DHFR-204ENST00000508282 SERPINB2P05120 415 aa4.6□□□□□ -1.67
DHFR-204ENST00000508282 PON1P27169 355 aa4.6□□□□□ -1.67
DHFR-204ENST00000508282 PPP2R2BQ00005 443 aa4.6□□□□□ -1.67
DHFR-204ENST00000508282 GAGE2BQ13066 116 aa4.6□□□□□ -1.67
DHFR-204ENST00000508282 FCN2Q15485 313 aa4.6□□□□□ -1.67
DHFR-204ENST00000508282 GAGE2EQ4V326 116 aa4.6□□□□□ -1.67
DHFR-204ENST00000508282 CCDC30Q5VVM6 783 aa4.6□□□□□ -1.67
DHFR-204ENST00000508282 GAGE2AQ6NT46 116 aa4.6□□□□□ -1.67
DHFR-204ENST00000508282 TEX11Q8IYF3 940 aa4.6□□□□□ -1.67
DHFR-204ENST00000508282 TMTC2Q8N394 836 aa4.6□□□□□ -1.67
DHFR-204ENST00000508282 PPHLN1Q8NEY8 458 aaKnown RBP4.6□□□□□ -1.67
DHFR-204ENST00000508282 SEMA4DQ92854 862 aa4.6□□□□□ -1.67
DHFR-204ENST00000508282 PGAM5Q96HS1 289 aa4.6□□□□□ -1.67
DHFR-204ENST00000508282 DDOQ99489 341 aa4.6□□□□□ -1.67
DHFR-204ENST00000508282 GFRA4Q9GZZ7 299 aa4.6□□□□□ -1.67
DHFR-204ENST00000508282 GAGE2DQ9UEU5 116 aa4.6□□□□□ -1.67
DHFR-204ENST00000508282 NENFQ9UMX5 172 aa4.6□□□□□ -1.67
DHFR-204ENST00000508282 C2CD2Q9Y426 696 aa4.6□□□□□ -1.67
DHFR-204ENST00000508282 SNED1Q8TER0 1413 aa4.6□□□□□ -1.67
DHFR-204ENST00000508282 GH2P01242 217 aa4.59□□□□□ -1.67
DHFR-204ENST00000508282 RB1P06400 928 aa4.59□□□□□ -1.67
DHFR-204ENST00000508282 CLTBP09497 229 aa4.59□□□□□ -1.67
DHFR-204ENST00000508282 GNB3P16520 340 aa4.59□□□□□ -1.67
DHFR-204ENST00000508282 FLT1P17948 1338 aa4.59□□□□□ -1.67
DHFR-204ENST00000508282 GNAZP19086 355 aa4.59□□□□□ -1.67
DHFR-204ENST00000508282 CBLP22681 906 aa4.59□□□□□ -1.67
DHFR-204ENST00000508282 GARSP41250 739 aaKnown RBP4.59□□□□□ -1.67
DHFR-204ENST00000508282 THOP1P52888 689 aa4.59□□□□□ -1.67
DHFR-204ENST00000508282 ERVK11-1P61568 191 aa4.59□□□□□ -1.67
DHFR-204ENST00000508282 PMP22Q01453 160 aa4.59□□□□□ -1.67
DHFR-204ENST00000508282 FAM109BQ6ICB4 259 aaPredicted RBP4.59□□□□□ -1.67
DHFR-204ENST00000508282 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.59□□□□□ -1.67
DHFR-204ENST00000508282 RSRC2Q7L4I2 434 aaKnown RBP4.59□□□□□ -1.67
DHFR-204ENST00000508282 MAATS1Q7Z4T9 603 aa4.59□□□□□ -1.67
DHFR-204ENST00000508282 KRTAP7-1Q8IUC3 87 aa4.59□□□□□ -1.67
DHFR-204ENST00000508282 SCYL3Q8IZE3 742 aa4.59□□□□□ -1.67
DHFR-204ENST00000508282 DACH2Q96NX9 599 aa4.59□□□□□ -1.67
DHFR-204ENST00000508282 FTOQ9C0B1 505 aaKnown RBP eCLIP4.59□□□□□ -1.679e-18■■■■■ 29.4
DHFR-204ENST00000508282 DENND2DQ9H6A0 471 aaPredicted RBP4.59□□□□□ -1.67
DHFR-204ENST00000508282 DNAJC18Q9H819 358 aa4.59□□□□□ -1.67
DHFR-204ENST00000508282 PELI2Q9HAT8 420 aa4.59□□□□□ -1.67
DHFR-204ENST00000508282 MIOSQ9NXC5 875 aa4.59□□□□□ -1.67
DHFR-204ENST00000508282 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.59□□□□□ -1.67
DHFR-204ENST00000508282 GREB1LQ9C091 1923 aaPredicted RBP4.58□□□□□ -1.68
DHFR-204ENST00000508282 A0A0G2JLW4 131 aa4.58□□□□□ -1.68
DHFR-204ENST00000508282 CDRT15L2A8MXV6 281 aa4.58□□□□□ -1.68
DHFR-204ENST00000508282 HHLA1C9JL84 531 aa4.58□□□□□ -1.68
DHFR-204ENST00000508282 NMBRP28336 390 aa4.58□□□□□ -1.68
DHFR-204ENST00000508282 HADHAP40939 763 aa4.58□□□□□ -1.68
DHFR-204ENST00000508282 VEGFCP49767 419 aa4.58□□□□□ -1.68
DHFR-204ENST00000508282 HSD17B4P51659 736 aa4.58□□□□□ -1.68
DHFR-204ENST00000508282 PRKAA1Q13131 559 aa4.58□□□□□ -1.68
DHFR-204ENST00000508282 MFAP5Q13361 173 aa4.58□□□□□ -1.68
DHFR-204ENST00000508282 DLG2Q15700 870 aa4.58□□□□□ -1.68
DHFR-204ENST00000508282 TBC1D1Q86TI0 1168 aaPredicted RBP4.58□□□□□ -1.68
DHFR-204ENST00000508282 ARID3BQ8IVW6 561 aaPredicted RBP4.58□□□□□ -1.68
DHFR-204ENST00000508282 CRYBG2Q8N1P7 616 aa4.58□□□□□ -1.68
DHFR-204ENST00000508282 L3MBTL4Q8NA19 623 aa4.58□□□□□ -1.68
DHFR-204ENST00000508282 LRR1Q96L50 414 aa4.58□□□□□ -1.68
DHFR-204ENST00000508282 ZNF582Q96NG8 517 aaPredicted RBP4.58□□□□□ -1.68
DHFR-204ENST00000508282 C1QTNF1Q9BXJ1 281 aa4.58□□□□□ -1.68
DHFR-204ENST00000508282 SLA2Q9H6Q3 261 aa4.58□□□□□ -1.68
DHFR-204ENST00000508282 EIF2B3Q9NR50 452 aaKnown RBP4.58□□□□□ -1.68
DHFR-204ENST00000508282 KCNK7Q9Y2U2 307 aa4.58□□□□□ -1.68
DHFR-204ENST00000508282 GPR137BO60478 399 aa4.57□□□□□ -1.68
DHFR-204ENST00000508282 PTP4A3O75365 173 aa4.57□□□□□ -1.68
DHFR-204ENST00000508282 CKMT2P17540 419 aa4.57□□□□□ -1.68
DHFR-204ENST00000508282 DENND5BQ6ZUT9 1274 aa4.57□□□□□ -1.68
DHFR-204ENST00000508282 GALNT5Q7Z7M9 940 aa4.57□□□□□ -1.68
DHFR-204ENST00000508282 ADGRF2Q8IZF7 708 aa4.57□□□□□ -1.68
DHFR-204ENST00000508282 TTC39CQ8N584 583 aa4.57□□□□□ -1.68
DHFR-204ENST00000508282 ADAD2Q8NCV1 583 aaKnown RBP4.57□□□□□ -1.68
DHFR-204ENST00000508282 OR2T12Q8NG77 320 aa4.57□□□□□ -1.68
DHFR-204ENST00000508282 MOAP1Q96BY2 351 aa4.57□□□□□ -1.68
DHFR-204ENST00000508282 MOV10L1Q9BXT6 1211 aaKnown RBP4.57□□□□□ -1.68
DHFR-204ENST00000508282 A6NL46 340 aa4.56□□□□□ -1.68
DHFR-204ENST00000508282 PLOD2O00469 737 aa4.56□□□□□ -1.68
DHFR-204ENST00000508282 NDUFS4O43181 175 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms