RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 CST1P01037 141 aa13.25□□□□□ -0.29
SNCAIP-209ENST00000508017 FGF1P05230 155 aa13.25□□□□□ -0.29
SNCAIP-209ENST00000508017 CTSHP09668 335 aa13.25□□□□□ -0.29
SNCAIP-209ENST00000508017 FSHRP23945 695 aa13.25□□□□□ -0.29
SNCAIP-209ENST00000508017 ALDH4A1P30038 563 aa13.25□□□□□ -0.29
SNCAIP-209ENST00000508017 GPR15P49685 360 aa13.25□□□□□ -0.29
SNCAIP-209ENST00000508017 PPP2R2BQ00005 443 aa13.25□□□□□ -0.29
SNCAIP-209ENST00000508017 GRB14Q14449 540 aa13.25□□□□□ -0.29
SNCAIP-209ENST00000508017 ZNF846Q147U1 533 aa13.25□□□□□ -0.29
SNCAIP-209ENST00000508017 TTC23Q5W5X9 447 aa13.25□□□□□ -0.29
SNCAIP-209ENST00000508017 OVOS1Q6IE37 1185 aa13.25□□□□□ -0.29
SNCAIP-209ENST00000508017 SPESP1Q6UW49 350 aa13.25□□□□□ -0.29
SNCAIP-209ENST00000508017 SPATA2LQ8IUW3 424 aaPredicted RBP13.25□□□□□ -0.29
SNCAIP-209ENST00000508017 FAM126BQ8IXS8 530 aa13.25□□□□□ -0.29
SNCAIP-209ENST00000508017 OR56A4Q8NGH8 313 aa13.25□□□□□ -0.29
SNCAIP-209ENST00000508017 BRSK1Q8TDC3 778 aa13.25□□□□□ -0.29
SNCAIP-209ENST00000508017 ZFP90Q8TF47 636 aa13.25□□□□□ -0.29
SNCAIP-209ENST00000508017 MYEOVQ96EZ4 313 aa13.25□□□□□ -0.29
SNCAIP-209ENST00000508017 SLC39A13Q96H72 371 aa13.25□□□□□ -0.29
SNCAIP-209ENST00000508017 HEPHQ9BQS7 1158 aa13.25□□□□□ -0.29
SNCAIP-209ENST00000508017 MROQ9BYG7 248 aa13.25□□□□□ -0.29
SNCAIP-209ENST00000508017 CCDC90BQ9GZT6 254 aa13.25□□□□□ -0.29
SNCAIP-209ENST00000508017 IKZF5Q9H5V7 419 aa13.25□□□□□ -0.29
SNCAIP-209ENST00000508017 VAPAQ9P0L0 249 aa13.25□□□□□ -0.29
SNCAIP-209ENST00000508017 POLR3HQ9Y535 204 aaPredicted RBP13.25□□□□□ -0.29
SNCAIP-209ENST00000508017 DOCK3Q8IZD9 2030 aa13.25□□□□□ -0.29
SNCAIP-209ENST00000508017 FAM92AA1XBS5 289 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 C16orf96A6NNT2 1141 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 SYCE1LA8MT33 242 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 SLC1A7O00341 560 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 KPNA4O00629 521 aaPredicted RBP13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 E2F3O00716 465 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 STX16O14662 325 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 KLK8O60259 260 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 SOAT2O75908 522 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 MLYCDO95822 493 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 TSPAN12O95859 305 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 TBX18O95935 607 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 PCMT1P22061 227 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 TBX4P57082 545 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 TRIM32Q13049 653 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 PTPRNQ16849 979 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 FBXL22Q6P050 247 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 CYP20A1Q6UW02 462 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 ZNF555Q8NEP9 628 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 NLGN2Q8NFZ4 835 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 FRS2Q8WU20 508 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 FATE1Q969F0 183 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 SDCCAG3Q96C92 435 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 ITCHQ96J02 903 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 NSMCE3Q96MG7 304 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 C1QTNF3Q9BXJ4 246 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 AKIP1Q9NQ31 210 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 DNMT3BQ9UBC3 853 aaKnown RBP13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 MTRRQ9UBK8 725 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 LIMD1Q9UGP4 676 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 FBXO10Q9UK96 956 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 INVSQ9Y283 1065 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 TLR6Q9Y2C9 796 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 XPNPEP2O43895 674 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 OR1I1O60431 355 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 NPPAP01160 153 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 HLA-DPA1P20036 260 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 RPL9P32969 192 aaKnown RBP13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 LSM3P62310 102 aaKnown RBP13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 IL27RAQ6UWB1 636 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 DNAJC14Q6Y2X3 702 aaPredicted RBP13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 EFL1Q7Z2Z2 1120 aaKnown RBP13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 SLCO6A1Q86UG4 719 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 TTC16Q8NEE8 873 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 PJA1Q8NG27 643 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 OR4K2Q8NGD2 314 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 OR10A6Q8NH74 314 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 EEF1AKMT1Q8WVE0 214 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 ITPKCQ96DU7 683 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 FEM1AQ9BSK4 669 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 ALOXE3Q9BYJ1 711 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 POLR1EQ9GZS1 481 aaKnown RBP13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 HEBP1Q9NRV9 189 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 SACM1LQ9NTJ5 587 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 CD274Q9NZQ7 290 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 FNIP2Q9P278 1114 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 DNAJB9Q9UBS3 223 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 AASSQ9UDR5 926 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 ZNF232Q9UNY5 417 aa13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 FNDC3AQ9Y2H6 1198 aaKnown RBP13.24□□□□□ -0.29
SNCAIP-209ENST00000508017 ANKRD28O15084 1053 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 HS6ST1O60243 411 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 UGT2B11O75310 529 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 NDUFS3O75489 264 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 CYP11A1P05108 521 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 CAPN1P07384 714 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 HMBSP08397 361 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 HOXD12P35452 270 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 TMED10P49755 219 aaKnown RBP13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 GABARAPL2P60520 117 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 ISL1P61371 349 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 OCA2Q04671 838 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 EFEMP1Q12805 493 aa13.23□□□□□ -0.29
SNCAIP-209ENST00000508017 PWP1Q13610 501 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms