RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 ZNF358Q9NW07 568 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 STMN3Q9NZ72 180 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 ATXN10Q9UBB4 475 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 CDC23Q9UJX2 597 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 CNOT6Q9ULM6 557 aaKnown RBP7.01□□□□□ -1.29
VCAN-207ENST00000507162 PPT2Q9UMR5 302 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 CDYLQ9Y232 598 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 PKD1L1Q8TDX9 2849 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7□□□□□ -1.29
VCAN-207ENST00000507162 OR6C74A6NCV1 312 aa7□□□□□ -1.29
VCAN-207ENST00000507162 WASH4PA8MWX3 477 aa7□□□□□ -1.29
VCAN-207ENST00000507162 E7EQ34 232 aa7□□□□□ -1.29
VCAN-207ENST00000507162 SMAD7O15105 426 aaKnown RBP7□□□□□ -1.29
VCAN-207ENST00000507162 SLC16A3O15427 465 aaKnown RBP7□□□□□ -1.29
VCAN-207ENST00000507162 MTA2O94776 668 aa7□□□□□ -1.29
VCAN-207ENST00000507162 UMODP07911 640 aa7□□□□□ -1.29
VCAN-207ENST00000507162 UQCRHP07919 91 aa7□□□□□ -1.29
VCAN-207ENST00000507162 CD63P08962 238 aa7□□□□□ -1.29
VCAN-207ENST00000507162 HBQ1P09105 142 aa7□□□□□ -1.29
VCAN-207ENST00000507162 ABOP16442 354 aa7□□□□□ -1.29
VCAN-207ENST00000507162 ZNF7P17097 686 aaPredicted RBP7□□□□□ -1.29
VCAN-207ENST00000507162 IGFBP2P18065 325 aa7□□□□□ -1.29
VCAN-207ENST00000507162 SYT1P21579 422 aa7□□□□□ -1.29
VCAN-207ENST00000507162 CDH3P22223 829 aa7□□□□□ -1.29
VCAN-207ENST00000507162 IDSP22304 550 aa7□□□□□ -1.29
VCAN-207ENST00000507162 TNFSF10P50591 281 aa7□□□□□ -1.29
VCAN-207ENST00000507162 PAPOLAP51003 745 aaKnown RBP7□□□□□ -1.29
VCAN-207ENST00000507162 CLCNKAP51800 687 aa7□□□□□ -1.29
VCAN-207ENST00000507162 AP1S1P61966 158 aa7□□□□□ -1.29
VCAN-207ENST00000507162 INAQ16352 499 aa7□□□□□ -1.29
VCAN-207ENST00000507162 C15orf59Q2T9L4 293 aaPredicted RBP7□□□□□ -1.29
VCAN-207ENST00000507162 AGAP9Q5VTM2 703 aa7□□□□□ -1.29
VCAN-207ENST00000507162 LRRC66Q68CR7 880 aa7□□□□□ -1.29
VCAN-207ENST00000507162 CEP128Q6ZU80 1094 aa7□□□□□ -1.29
VCAN-207ENST00000507162 USP45Q70EL2 814 aa7□□□□□ -1.29
VCAN-207ENST00000507162 CAMKMTQ7Z624 323 aa7□□□□□ -1.29
VCAN-207ENST00000507162 NLRP8Q86W28 1048 aa7□□□□□ -1.29
VCAN-207ENST00000507162 CCDC185Q8N715 623 aa7□□□□□ -1.29
VCAN-207ENST00000507162 EMC1Q8N766 993 aa7□□□□□ -1.29
VCAN-207ENST00000507162 AGAP11Q8TF27 550 aa7□□□□□ -1.29
VCAN-207ENST00000507162 SCRN2Q96FV2 425 aa7□□□□□ -1.29
VCAN-207ENST00000507162 ZNF396Q96N95 335 aaPredicted RBP7□□□□□ -1.29
VCAN-207ENST00000507162 CD180Q99467 661 aa7□□□□□ -1.29
VCAN-207ENST00000507162 TSG101Q99816 390 aa7□□□□□ -1.29
VCAN-207ENST00000507162 GPATCH1Q9BRR8 931 aaKnown RBP7□□□□□ -1.29
VCAN-207ENST00000507162 SCAND2PQ9GZW5 306 aaPredicted RBP7□□□□□ -1.29
VCAN-207ENST00000507162 CARD9Q9H257 536 aa7□□□□□ -1.29
VCAN-207ENST00000507162 PDFQ9HBH1 243 aa7□□□□□ -1.29
VCAN-207ENST00000507162 KCNJ16Q9NPI9 418 aa7□□□□□ -1.29
VCAN-207ENST00000507162 NPDC1Q9NQX5 325 aaPredicted RBP7□□□□□ -1.29
VCAN-207ENST00000507162 FAM207AQ9NSI2 230 aaPredicted RBP7□□□□□ -1.29
VCAN-207ENST00000507162 LRFN1Q9P244 771 aa7□□□□□ -1.29
VCAN-207ENST00000507162 PTGFRNQ9P2B2 879 aa7□□□□□ -1.29
VCAN-207ENST00000507162 PCDHGC3Q9UN70 934 aa7□□□□□ -1.29
VCAN-207ENST00000507162 PCDHA7Q9UN72 937 aa7□□□□□ -1.29
VCAN-207ENST00000507162 NEU3Q9UQ49 428 aa7□□□□□ -1.29
VCAN-207ENST00000507162 C17orf113A0A1B0GUU1 675 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 A0A1W2PQ67 120 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 OR5K3A6NET4 321 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 ARHGAP42A6NI28 874 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 NPIPA5E9PKD4 350 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 SOCS6O14544 535 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 KMOO15229 486 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 MAP3K7O43318 606 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 HTRA2O43464 458 aaPredicted RBP6.99□□□□□ -1.29
VCAN-207ENST00000507162 CNOT3O75175 753 aaKnown RBP6.99□□□□□ -1.29
VCAN-207ENST00000507162 PMPCBO75439 489 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 CTAG2O75638 210 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 ZNF202O95125 648 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 HOXD4P09016 255 aaPredicted RBP6.99□□□□□ -1.29
VCAN-207ENST00000507162 POLR2CP19387 275 aaPredicted RBP6.99□□□□□ -1.29
VCAN-207ENST00000507162 IL4RP24394 825 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 HALP42357 657 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 LMAN1P49257 510 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 RENBPP51606 427 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 DCDP81605 110 aaKnown RBP6.99□□□□□ -1.29
VCAN-207ENST00000507162 FKBP3Q00688 224 aaKnown RBP6.99□□□□□ -1.29
VCAN-207ENST00000507162 PMP22Q01453 160 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 CCDC40Q4G0X9 1142 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 RESP18Q5W5W9 173 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 HMBOX1Q6NT76 420 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 GJB7Q6PEY0 223 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 ABRAXAS1Q6UWZ7 409 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 C16orf47Q6ZP98 133 aaPredicted RBP6.99□□□□□ -1.29
VCAN-207ENST00000507162 BNIPLQ7Z465 357 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 OOSP2Q86WS3 158 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 GPR135Q8IZ08 494 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 UMODL1-AS1Q8N2C9 162 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 ARMC2Q8NEN0 867 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 SUN3Q8TAQ9 357 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 TMEM158Q8WZ71 300 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 N4BP2L2Q92802 583 aaPredicted RBP6.99□□□□□ -1.29
VCAN-207ENST00000507162 SPATA32Q96LK8 384 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 SLC39A8Q9C0K1 460 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 KLHL25Q9H0H3 589 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 TSPAN10Q9H1Z9 355 aaPredicted RBP6.99□□□□□ -1.29
VCAN-207ENST00000507162 CLEC4MQ9H2X3 399 aaPredicted RBP6.99□□□□□ -1.29
VCAN-207ENST00000507162 CATSPERBQ9H7T0 1116 aa6.99□□□□□ -1.29
VCAN-207ENST00000507162 SEPT11Q9NVA2 429 aaKnown RBP6.99□□□□□ -1.29
VCAN-207ENST00000507162 IL17CQ9P0M4 197 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms