RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 KIF5AQ12840 1032 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 CLCA4Q14CN2 919 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 PLCL1Q15111 1095 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 RPE65Q16518 533 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 P3H1Q32P28 736 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 GPR33Q49SQ1 333 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 ZNF449Q6P9G9 518 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 C6orf15Q6UXA7 325 aaPredicted RBP14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 KIAA1328Q86T90 577 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 OOSP2Q86WS3 158 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 PPP1R3BQ86XI6 285 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 OR2L2Q8NH16 312 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 CTRCQ99895 268 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 ULBP3Q9BZM4 244 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 UGT1A7Q9HAW7 530 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 UGT1A10Q9HAW8 530 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 UGT1A8Q9HAW9 530 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 CRLS1Q9UJA2 301 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 AMFRQ9UKV5 643 aa14.13□□□□□ -0.15
HMGCS1-203ENST00000507004 C17orf113A0A1B0GUU1 675 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 SOWAHDA6NJG2 315 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 OR2AG2A6NM03 316 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 AGAP14A8MT82 685 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 SLC35G4P0C7Q5 338 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 FAM87AP0C7U9 286 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 MTHFD1P11586 935 aaKnown RBP14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 ITGB6P18564 788 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 NELFEP18615 380 aaKnown RBP14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 TCN2P20062 427 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 ARL4DP49703 201 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 CTSCP53634 463 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 SEPT6Q14141 434 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 PARP6Q2NL67 630 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 FNBP1LQ5T0N5 605 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 ARMC6Q6NXE6 501 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 IRGCQ6NXR0 463 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 PEX26Q7Z412 305 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 SNX20Q7Z614 316 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 RASGRP3Q8IV61 690 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 KLHDC8BQ8IXV7 354 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 OR4K2Q8NGD2 314 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 OR8K5Q8NH50 307 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 RSC1A1Q92681 617 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 STAMBPL1Q96FJ0 436 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 SLC41A2Q96JW4 573 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 OR6C1Q96RD1 312 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 COPS8Q99627 209 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 APMAPQ9HDC9 416 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 RARRES3Q9UL19 164 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 WDR37Q9Y2I8 494 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 RPS6KL1Q9Y6S9 549 aa14.12□□□□□ -0.15
HMGCS1-203ENST00000507004 TLCD2A6NGC4 264 aa14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 F8W8V4 182 aa14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 QSOX1O00391 747 aa14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 GAPDHSO14556 408 aaPredicted RBP14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 PSMB4P28070 264 aa14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 LEPRP48357 1165 aaKnown RBP14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 SEPHS1P49903 392 aa14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 POLE2P56282 527 aa14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 CDC20Q12834 499 aa14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 KCNAB2Q13303 367 aa14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 LAMB3Q13751 1172 aa14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 NFE2L1Q14494 772 aa14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 TMTC4Q5T4D3 741 aa14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 ARHGEF18Q6ZSZ5 1173 aa14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 TIPARPQ7Z3E1 657 aaKnown RBP14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 PRICKLE2Q7Z3G6 844 aa14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 SIDT2Q8NBJ9 832 aaKnown RBP14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 HM13Q8TCT9 377 aa14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 APOBEC4Q8WW27 367 aaKnown RBP14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 STARD8Q92502 1023 aa14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 BAG1Q99933 345 aaPredicted RBP14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 TBL1YQ9BQ87 522 aa14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 LRRC40Q9H9A6 602 aa14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 SYTL2Q9HCH5 934 aa14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 IMP3Q9NV31 184 aaKnown RBP14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 IMPACTQ9P2X3 320 aa14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 TRIM10Q9UDY6 481 aa14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 PADI1Q9ULC6 663 aa14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 KCTD3Q9Y597 815 aa14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 ARL5AQ9Y689 179 aa14.11□□□□□ -0.15
HMGCS1-203ENST00000507004 LOC101059948A0A1B0GTJ6 334 aa14.1□□□□□ -0.15
HMGCS1-203ENST00000507004 OR5K3A6NET4 321 aa14.1□□□□□ -0.15
HMGCS1-203ENST00000507004 GOLGA6L6A8MZA4 724 aa14.1□□□□□ -0.15
HMGCS1-203ENST00000507004 C21orf140B9A014 251 aa14.1□□□□□ -0.15
HMGCS1-203ENST00000507004 F5H423 210 aaPredicted RBP14.1□□□□□ -0.15
HMGCS1-203ENST00000507004 H7C0S8 307 aa14.1□□□□□ -0.15
HMGCS1-203ENST00000507004 MAP3K7O43318 606 aa14.1□□□□□ -0.15
HMGCS1-203ENST00000507004 BUD23O43709 281 aaKnown RBP14.1□□□□□ -0.15
HMGCS1-203ENST00000507004 WISP1O95388 367 aa14.1□□□□□ -0.15
HMGCS1-203ENST00000507004 PRLHRP49683 370 aa14.1□□□□□ -0.15
HMGCS1-203ENST00000507004 CSRP3P50461 194 aa14.1□□□□□ -0.15
HMGCS1-203ENST00000507004 CYP4F2P78329 520 aa14.1□□□□□ -0.15
HMGCS1-203ENST00000507004 KCNC4Q03721 635 aa14.1□□□□□ -0.15
HMGCS1-203ENST00000507004 PRKAA1Q13131 559 aa14.1□□□□□ -0.15
HMGCS1-203ENST00000507004 KRT33BQ14525 404 aa14.1□□□□□ -0.15
HMGCS1-203ENST00000507004 GSE1Q14687 1217 aa14.1□□□□□ -0.15
HMGCS1-203ENST00000507004 DNTTIP2Q5QJE6 756 aaKnown RBP14.1□□□□□ -0.15
HMGCS1-203ENST00000507004 FAM182AQ5T1J6 154 aa14.1□□□□□ -0.15
HMGCS1-203ENST00000507004 LINC00523Q86TU6 105 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms