RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 GPR150Q8NGU9 434 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 OR2L2Q8NH16 312 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 RSC1A1Q92681 617 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 NKD1Q969G9 470 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 CXorf40BQ96DE9 158 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 SGF29Q96ES7 293 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 C9orf72Q96LT7 481 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 TMEM121Q9BTD3 319 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 TSGA10Q9BZW7 698 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 LRRC40Q9H9A6 602 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 SEMA5BQ9P283 1151 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 PILRAQ9UKJ1 303 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 GUCA1BQ9UMX6 200 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 PCDHGA4Q9Y5G9 962 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 TLN1Q9Y490 2541 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 EIF4E1BA6NMX2 242 aaKnown RBP8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 GOLGA6L6A8MZA4 724 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 CCL22O00626 93 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 CAPN5O15484 640 aaPredicted RBP8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 ARHGAP6O43182 974 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 PSMD3O43242 534 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 LIASO43766 372 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 DLGAP3O95886 979 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 AMD1P17707 334 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 MSH3P20585 1137 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 ITGALP20701 1170 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 AKT1P31749 480 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 STIP1P31948 543 aaKnown RBP8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 HALP42357 657 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 LEPRP48357 1165 aaKnown RBP8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 PRLHRP49683 370 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 GPR33Q49SQ1 333 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 TAF1BQ53T94 588 aaPredicted RBP8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 FNBP1LQ5T0N5 605 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 MEI1Q5TIA1 1274 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 CEACAM20Q6UY09 585 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 ZNF662Q6ZS27 426 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 MICALCLQ6ZW33 695 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 PRSS42Q7Z5A4 293 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 SNX20Q7Z614 316 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 SLC13A5Q86YT5 568 aaPredicted RBP8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 BEND7Q8N7W2 519 aaPredicted RBP8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 NAT14Q8WUY8 206 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 ATG4AQ8WYN0 398 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 KLHL6Q8WZ60 621 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 ULK4Q96C45 1275 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 DNAJC1Q96KC8 554 aaKnown RBP8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 INSM2Q96T92 566 aaPredicted RBP8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 ZPBPQ9BS86 351 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 FRMD8P1Q9BZ68 369 aaPredicted RBP8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 SEMA4CQ9C0C4 833 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 ZNF768Q9H5H4 540 aaKnown RBP8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 APMAPQ9HDC9 416 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 NLE1Q9NVX2 485 aaPredicted RBP8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 KLHL3Q9UH77 587 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 CRLS1Q9UJA2 301 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 ACSL5Q9ULC5 683 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 TMEM184BQ9Y519 407 aaPredicted RBP8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 PCDHB11Q9Y5F2 797 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 SPTA1P02549 2419 aa8.88□□□□□ -0.99
PDLIM5-209ENST00000506632 GCN1Q92616 2671 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 ATMQ13315 3056 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 C17orf113A0A1B0GUU1 675 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 MROH6A6NGR9 719 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 ERI2A8K979 691 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 KIF1CO43896 1103 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 RAD1O60671 282 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 SUN1O94901 812 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 ITGB2P05107 769 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 PTMAP06454 111 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 MTHFD1P11586 935 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 ATP1B2P14415 290 aaPredicted RBP8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 TPH1P17752 444 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 PBLDP30039 288 aaPredicted RBP8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 MC4RP32245 332 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 PPM1FP49593 454 aaPredicted RBP8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 CDKN1CP49918 316 aaPredicted RBP8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 ATP1A2P50993 1020 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 TMPRSS15P98073 1019 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 C19orf57Q0VDD7 668 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 LY6DQ14210 128 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 SIX1Q15475 284 aaPredicted RBP8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 LINC00303Q3SY05 128 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 SEL1L2Q5TEA6 688 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 CAPRIN2Q6IMN6 1127 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 DET1Q7L5Y6 550 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 TIPARPQ7Z3E1 657 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 PIANPQ8IYJ0 282 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 CACNA2D3Q8IZS8 1091 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 ZNF843Q8N446 348 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 LILRA3Q8N6C8 439 aaPredicted RBP8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 HM13Q8TCT9 377 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 STYXQ8WUJ0 223 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 HEXDCQ8WVB3 486 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 ZFPM2Q8WW38 1151 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 JPH3Q8WXH2 748 aaPredicted RBP8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 LRRC45Q96CN5 670 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 SLC41A2Q96JW4 573 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 RMDN2Q96LZ7 410 aa8.87□□□□□ -0.99
PDLIM5-209ENST00000506632 TGM7Q96PF1 710 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms