RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 CCM2Q9BSQ5 444 aa17.88■□□□□ 0.45
PDLIM7-216ENST00000506537 TRIM31Q9BZY9 425 aa17.88■□□□□ 0.45
PDLIM7-216ENST00000506537 IL1RAPL1Q9NZN1 696 aa17.88■□□□□ 0.45
PDLIM7-216ENST00000506537 ENTPD2Q9Y5L3 495 aa17.88■□□□□ 0.45
PDLIM7-216ENST00000506537 UNC13CQ8NB66 2214 aa17.88■□□□□ 0.45
PDLIM7-216ENST00000506537 A0A1W2PNU3 283 aaPredicted RBP17.87■□□□□ 0.45
PDLIM7-216ENST00000506537 KLHL33A6NCF5 533 aa17.87■□□□□ 0.45
PDLIM7-216ENST00000506537 TRABD2BA6NFA1 517 aa17.87■□□□□ 0.45
PDLIM7-216ENST00000506537 RAD51CO43502 376 aa17.87■□□□□ 0.45
PDLIM7-216ENST00000506537 CAPNS1P04632 268 aa17.87■□□□□ 0.45
PDLIM7-216ENST00000506537 RPL21P46778 160 aaKnown RBP17.87■□□□□ 0.45
PDLIM7-216ENST00000506537 ITGA8P53708 1063 aa17.87■□□□□ 0.45
PDLIM7-216ENST00000506537 CFHR1Q03591 330 aa17.87■□□□□ 0.45
PDLIM7-216ENST00000506537 MORF4L2Q15014 288 aa17.87■□□□□ 0.45
PDLIM7-216ENST00000506537 RPE65Q16518 533 aa17.87■□□□□ 0.45
PDLIM7-216ENST00000506537 AARS2Q5JTZ9 985 aaKnown RBP17.87■□□□□ 0.45
PDLIM7-216ENST00000506537 SPDYE1Q8NFV5 336 aaPredicted RBP17.87■□□□□ 0.45
PDLIM7-216ENST00000506537 ATXN7L3BQ96GX2 97 aa17.87■□□□□ 0.45
PDLIM7-216ENST00000506537 SLC38A3Q99624 504 aa17.87■□□□□ 0.45
PDLIM7-216ENST00000506537 NUDT22Q9BRQ3 303 aa17.87■□□□□ 0.45
PDLIM7-216ENST00000506537 TBC1D10AQ9BXI6 508 aa17.87■□□□□ 0.45
PDLIM7-216ENST00000506537 FOXP3Q9BZS1 431 aa17.87■□□□□ 0.45
PDLIM7-216ENST00000506537 WWP1Q9H0M0 922 aa17.87■□□□□ 0.45
PDLIM7-216ENST00000506537 COG4Q9H9E3 785 aa17.87■□□□□ 0.45
PDLIM7-216ENST00000506537 RDH14Q9HBH5 336 aa17.87■□□□□ 0.45
PDLIM7-216ENST00000506537 KCNK4Q9NYG8 393 aa17.87■□□□□ 0.45
PDLIM7-216ENST00000506537 CDC23Q9UJX2 597 aa17.87■□□□□ 0.45
PDLIM7-216ENST00000506537 DMXL2Q8TDJ6 3036 aa17.87■□□□□ 0.45
PDLIM7-216ENST00000506537 C17orf113A0A1B0GUU1 675 aa17.86■□□□□ 0.45
PDLIM7-216ENST00000506537 EFCAB8A8MWE9 144 aa17.86■□□□□ 0.45
PDLIM7-216ENST00000506537 POLBP06746 335 aa17.86■□□□□ 0.45
PDLIM7-216ENST00000506537 DHX9Q08211 1270 aaKnown RBP17.86■□□□□ 0.45
PDLIM7-216ENST00000506537 MAP9Q49MG5 647 aa17.86■□□□□ 0.45
PDLIM7-216ENST00000506537 DUS1LQ6P1R4 473 aaKnown RBP17.86■□□□□ 0.45
PDLIM7-216ENST00000506537 USP53Q70EK8 1073 aa17.86■□□□□ 0.45
PDLIM7-216ENST00000506537 SLITRK4Q8IW52 837 aa17.86■□□□□ 0.45
PDLIM7-216ENST00000506537 TRIM48Q8IWZ4 208 aa17.86■□□□□ 0.45
PDLIM7-216ENST00000506537 CFAP206Q8IYR0 622 aa17.86■□□□□ 0.45
PDLIM7-216ENST00000506537 AVL9Q8NBF6 648 aa17.86■□□□□ 0.45
PDLIM7-216ENST00000506537 LKAAEAR1Q8TD35 194 aa17.86■□□□□ 0.45
PDLIM7-216ENST00000506537 TRIM44Q96DX7 344 aaPredicted RBP17.86■□□□□ 0.45
PDLIM7-216ENST00000506537 SNF8Q96H20 258 aa17.86■□□□□ 0.45
PDLIM7-216ENST00000506537 INSM2Q96T92 566 aaPredicted RBP17.86■□□□□ 0.45
PDLIM7-216ENST00000506537 WDR83Q9BRX9 315 aaKnown RBP17.86■□□□□ 0.45
PDLIM7-216ENST00000506537 STN1Q9H668 368 aaKnown RBP17.86■□□□□ 0.45
PDLIM7-216ENST00000506537 UCK1Q9HA47 277 aa17.86■□□□□ 0.45
PDLIM7-216ENST00000506537 SLC40A1Q9NP59 571 aa17.86■□□□□ 0.45
PDLIM7-216ENST00000506537 POT1Q9NUX5 634 aa17.86■□□□□ 0.45
PDLIM7-216ENST00000506537 ACSL5Q9ULC5 683 aa17.86■□□□□ 0.45
PDLIM7-216ENST00000506537 SNX24Q9Y343 169 aa17.86■□□□□ 0.45
PDLIM7-216ENST00000506537 CFAP20Q9Y6A4 193 aaKnown RBP17.86■□□□□ 0.45
PDLIM7-216ENST00000506537 MAD1L1Q9Y6D9 718 aa17.86■□□□□ 0.45
PDLIM7-216ENST00000506537 RPS6KL1Q9Y6S9 549 aa17.86■□□□□ 0.45
PDLIM7-216ENST00000506537 KIF26BQ2KJY2 2108 aa17.86■□□□□ 0.45
PDLIM7-216ENST00000506537 MAP1BP46821 2468 aaKnown RBP17.86■□□□□ 0.45
PDLIM7-216ENST00000506537 MAGEB16A2A368 324 aa17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 PMS2P1A4D2B8 440 aa17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 FAM187AA6NFU0 413 aa17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 LILRA5A6NI73 299 aa17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 URI1O94763 535 aaPredicted RBP17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 USP1O94782 785 aa17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 CPNE6O95741 557 aa17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 VIPP01282 170 aa17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 HALP42357 657 aa17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 PREPP48147 710 aa17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 TTPAP49638 278 aa17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 GPLD1P80108 840 aa17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 ZFP36L1Q07352 338 aaKnown RBP17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 TYSND1Q2T9J0 566 aa17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 CAPRIN2Q6IMN6 1127 aaKnown RBP17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 NAPRTQ6XQN6 538 aa17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 ZNF574Q6ZN55 896 aaPredicted RBP17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 TMEM26Q6ZUK4 368 aa17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 IGDCC3Q8IVU1 814 aa17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 OTUD6BQ8N6M0 293 aa17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 ZNF592Q92610 1267 aa17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 SH3KBP1Q96B97 665 aa17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 CXorf40BQ96DE9 158 aa17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 STAMBPL1Q96FJ0 436 aa17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 TTC1Q99614 292 aa17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 P2RY12Q9H244 342 aa17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 OR52A5Q9H2C5 316 aa17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 SEMA6CQ9H3T2 930 aa17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 VPS37BQ9H9H4 285 aa17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 PLAC1Q9HBJ0 212 aa17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 TMEM9Q9P0T7 183 aa17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 ANAPC5Q9UJX4 755 aa17.85■□□□□ 0.45
PDLIM7-216ENST00000506537 QSOX1O00391 747 aa17.84■□□□□ 0.45
PDLIM7-216ENST00000506537 PRMT5O14744 637 aaPredicted RBP17.84■□□□□ 0.45
PDLIM7-216ENST00000506537 FTH1P02794 183 aa17.84■□□□□ 0.45
PDLIM7-216ENST00000506537 F7P08709 466 aaPredicted RBP17.84■□□□□ 0.45
PDLIM7-216ENST00000506537 GSTM1P09488 218 aa17.84■□□□□ 0.45
PDLIM7-216ENST00000506537 OR56A5P0C7T3 313 aa17.84■□□□□ 0.45
PDLIM7-216ENST00000506537 MTHFD1P11586 935 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-216ENST00000506537 HOXB3P14651 431 aaPredicted RBP17.84■□□□□ 0.45
PDLIM7-216ENST00000506537 PAMP19021 973 aa17.84■□□□□ 0.45
PDLIM7-216ENST00000506537 PDHA2P29803 388 aa17.84■□□□□ 0.45
PDLIM7-216ENST00000506537 CCKBRP32239 447 aa17.84■□□□□ 0.45
PDLIM7-216ENST00000506537 EPHA4P54764 986 aa17.84■□□□□ 0.45
PDLIM7-216ENST00000506537 INHBCP55103 352 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms