RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 IL36RNQ9UBH0 155 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 CDC14AQ9UNH5 594 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 ZFP37Q9Y6Q3 630 aaPredicted RBP3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 GPRASP1Q5JY77 1395 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 THSD7AQ9UPZ6 1657 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 ATXN2Q99700 1313 aaKnown RBP3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 ZNF541Q9H0D2 1346 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 SSH2Q76I76 1423 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 LRP5O75197 1615 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 PHRF1Q9P1Y6 1649 aaKnown RBP3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 BRWD3Q6RI45 1802 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 TRAV34A0A0B4J273 112 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 TMEM272A0A1B0GTI8 110 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 WIPF3A6NGB9 483 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 CGB1A6NKQ9 187 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 HS3ST1O14792 307 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 NDUFS4O43181 175 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 SLC7A4O43246 635 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 SPRY1O43609 319 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 SYNCRIPO60506 623 aaKnown RBP3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 MOSPD3O75425 235 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 SLCO2B1O94956 709 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 EPN2O95208 641 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 KCNK5O95279 499 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 LINGO3P0C6S8 592 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 NAGAP17050 411 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 ACHEP22303 614 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 TCEA1P23193 301 aaKnown RBP3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 DNASE1P24855 282 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 NMBRP28336 390 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 BDKRB2P30411 391 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 HOXC13P31276 330 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 TLX1P31314 330 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 PCGF2P35227 344 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 KRT2P35908 639 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 RPL3P39023 403 aaKnown RBP3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 FASLGP48023 281 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 ENTPD1P49961 510 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 POLGP54098 1239 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 TGFB2P61812 414 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 CTTNQ14247 550 aaKnown RBP3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 GPR18Q14330 331 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 PTPRCAPQ14761 206 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 MVPQ14764 893 aaKnown RBP3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 MEP1AQ16819 746 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 ZNF284Q2VY69 593 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 OTUD1Q5VV17 481 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 ZDHHC20Q5W0Z9 365 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 FRG2Q64ET8 278 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 KRT39Q6A163 491 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 TMEM211Q6ICI0 200 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 CAVIN1Q6NZI2 390 aaKnown RBP3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 DUS1LQ6P1R4 473 aaKnown RBP3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 PAPD4Q6PIY7 484 aaKnown RBP3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 SUSD1Q6UWL2 747 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 CCDC91Q7Z6B0 441 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 ZC3HC1Q86WB0 502 aaKnown RBP3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 BEST3Q8N1M1 668 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 RASGEF1CQ8N431 466 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 FBXO39Q8N4B4 442 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 AADATQ8N5Z0 425 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 ZNF713Q8N859 430 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 IQUBQ8NA54 791 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 MIGA1Q8NAN2 632 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 MSANTD4Q8NCY6 345 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 TAS1R2Q8TE23 839 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 INPP5DQ92835 1189 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 ORAI1Q96D31 301 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 COQ8BQ96D53 544 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 GRAMD2BQ96HH9 432 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 APOLD1Q96LR9 279 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 NEK1Q96PY6 1258 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 FNBP1Q96RU3 617 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 EGFL8Q99944 293 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 SEMA3CQ99985 751 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 SYT17Q9BSW7 474 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 FAM129AQ9BZQ8 928 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 PCED1AQ9H1Q7 454 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 COPS7BQ9H9Q2 264 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 SEBOXQ9HB31 216 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 KRCC1Q9NPI7 259 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 ADARB2Q9NS39 739 aaKnown RBP3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 HS3ST3B1Q9Y662 390 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 COX11Q9Y6N1 276 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 SQORQ9Y6N5 450 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 ALS2Q96Q42 1657 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 TNS1Q9HBL0 1735 aaKnown RBP3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 CRYBG1Q9Y4K1 1723 aa3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 WDR33Q9C0J8 1336 aaKnown RBP3.19□□□□□ -1.9
TRAPPC11-205ENST00000506426 TAF1P21675 1872 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 RGPD8O14715 1765 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 COL14A1Q05707 1796 aaKnown RBP3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 COL5A2P05997 1499 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 EIF3AQ14152 1382 aaKnown RBP3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 B4DGG1 531 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 I6L893 689 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 J3KR12 359 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 VWA5AO00534 786 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 CYR61O00622 381 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 ASAP2O43150 1006 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms