RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 ATP1A1-AS1Q5TC04 95 aa12.88□□□□□ -0.35
DDX41-204ENST00000504807 ANKRD20A1Q5TYW2 823 aa12.88□□□□□ -0.35
DDX41-204ENST00000504807 ANKRD20A3Q5VUR7 823 aa12.88□□□□□ -0.35
DDX41-204ENST00000504807 CERS6Q6ZMG9 384 aa12.88□□□□□ -0.35
DDX41-204ENST00000504807 BZW1Q7L1Q6 419 aaKnown RBP12.88□□□□□ -0.35
DDX41-204ENST00000504807 DET1Q7L5Y6 550 aa12.88□□□□□ -0.35
DDX41-204ENST00000504807 TRAPPC5Q8IUR0 188 aa12.88□□□□□ -0.35
DDX41-204ENST00000504807 DDHD1Q8NEL9 900 aa12.88□□□□□ -0.35
DDX41-204ENST00000504807 SPDYE1Q8NFV5 336 aaPredicted RBP12.88□□□□□ -0.35
DDX41-204ENST00000504807 OR13C4Q8NGS5 318 aa12.88□□□□□ -0.35
DDX41-204ENST00000504807 TGM7Q96PF1 710 aa12.88□□□□□ -0.35
DDX41-204ENST00000504807 DPYSL5Q9BPU6 564 aa12.88□□□□□ -0.35
DDX41-204ENST00000504807 DESI2Q9BSY9 194 aa12.88□□□□□ -0.35
DDX41-204ENST00000504807 ZMYND15Q9H091 742 aa12.88□□□□□ -0.35
DDX41-204ENST00000504807 UCK1Q9HA47 277 aa12.88□□□□□ -0.35
DDX41-204ENST00000504807 RAD18Q9NS91 495 aa12.88□□□□□ -0.35
DDX41-204ENST00000504807 AKAP7Q9P0M2 348 aaPredicted RBP12.88□□□□□ -0.35
DDX41-204ENST00000504807 MRPS18BQ9Y676 258 aaKnown RBP12.88□□□□□ -0.35
DDX41-204ENST00000504807 CFAP20Q9Y6A4 193 aaKnown RBP12.88□□□□□ -0.35
DDX41-204ENST00000504807 BTNL10A8MVZ5 291 aa12.87□□□□□ -0.35
DDX41-204ENST00000504807 CAPN5O15484 640 aaPredicted RBP12.87□□□□□ -0.35
DDX41-204ENST00000504807 NKX2-8O15522 239 aa12.87□□□□□ -0.35
DDX41-204ENST00000504807 VPS4BO75351 444 aa12.87□□□□□ -0.35
DDX41-204ENST00000504807 POP7O75817 140 aaKnown RBP12.87□□□□□ -0.35
DDX41-204ENST00000504807 TIAF1O95411 115 aa12.87□□□□□ -0.35
DDX41-204ENST00000504807 HLA-DPA1P20036 260 aa12.87□□□□□ -0.35
DDX41-204ENST00000504807 GRNP28799 593 aaKnown RBP12.87□□□□□ -0.35
DDX41-204ENST00000504807 PBLDP30039 288 aaPredicted RBP12.87□□□□□ -0.35
DDX41-204ENST00000504807 CYLC1P35663 651 aaPredicted RBP12.87□□□□□ -0.35
DDX41-204ENST00000504807 SEPHS1P49903 392 aa12.87□□□□□ -0.35
DDX41-204ENST00000504807 CDKN1CP49918 316 aaPredicted RBP12.87□□□□□ -0.35
DDX41-204ENST00000504807 GDF10P55107 478 aa12.87□□□□□ -0.35
DDX41-204ENST00000504807 EIF3EP60228 445 aaKnown RBP12.87□□□□□ -0.35
DDX41-204ENST00000504807 SPA17Q15506 151 aa12.87□□□□□ -0.35
DDX41-204ENST00000504807 RPE65Q16518 533 aa12.87□□□□□ -0.35
DDX41-204ENST00000504807 DCAF12Q5T6F0 453 aa12.87□□□□□ -0.35
DDX41-204ENST00000504807 AGAP9Q5VTM2 703 aa12.87□□□□□ -0.35
DDX41-204ENST00000504807 CAPRIN2Q6IMN6 1127 aaKnown RBP12.87□□□□□ -0.35
DDX41-204ENST00000504807 TMEM220Q6QAJ8 160 aa12.87□□□□□ -0.35
DDX41-204ENST00000504807 WASH2PQ6VEQ5 465 aa12.87□□□□□ -0.35
DDX41-204ENST00000504807 KLHDC8BQ8IXV7 354 aa12.87□□□□□ -0.35
DDX41-204ENST00000504807 CACNA2D3Q8IZS8 1091 aa12.87□□□□□ -0.35
DDX41-204ENST00000504807 OR4K2Q8NGD2 314 aa12.87□□□□□ -0.35
DDX41-204ENST00000504807 GDAP1Q8TB36 358 aa12.87□□□□□ -0.35
DDX41-204ENST00000504807 DTX3LQ8TDB6 740 aa12.87□□□□□ -0.35
DDX41-204ENST00000504807 SH3KBP1Q96B97 665 aa12.87□□□□□ -0.35
DDX41-204ENST00000504807 VAT1Q99536 393 aa12.87□□□□□ -0.35
DDX41-204ENST00000504807 TRABDQ9H4I3 376 aa12.87□□□□□ -0.35
DDX41-204ENST00000504807 FAM96AQ9H5X1 160 aa12.87□□□□□ -0.35
DDX41-204ENST00000504807 WASH6PQ9NQA3 447 aa12.87□□□□□ -0.35
DDX41-204ENST00000504807 FBXO8Q9NRD0 319 aa12.87□□□□□ -0.35
DDX41-204ENST00000504807 TRHDEQ9UKU6 1024 aa12.87□□□□□ -0.35
DDX41-204ENST00000504807 VPS4AQ9UN37 437 aa12.87□□□□□ -0.35
DDX41-204ENST00000504807 ADGRG4Q8IZF6 3080 aa12.86□□□□□ -0.35
DDX41-204ENST00000504807 MACROD2A1Z1Q3 448 aa12.86□□□□□ -0.35
DDX41-204ENST00000504807 OR5K4A6NMS3 321 aa12.86□□□□□ -0.35
DDX41-204ENST00000504807 KCNN4O15554 427 aa12.86□□□□□ -0.35
DDX41-204ENST00000504807 ZW10O43264 779 aa12.86□□□□□ -0.35
DDX41-204ENST00000504807 STK17BO94768 372 aa12.86□□□□□ -0.35
DDX41-204ENST00000504807 PRAMEF1O95521 474 aa12.86□□□□□ -0.35
DDX41-204ENST00000504807 METTL18O95568 372 aa12.86□□□□□ -0.35
DDX41-204ENST00000504807 FTCDO95954 541 aa12.86□□□□□ -0.35
DDX41-204ENST00000504807 VIPP01282 170 aa12.86□□□□□ -0.35
DDX41-204ENST00000504807 ANKRD34CP0C6C1 535 aa12.86□□□□□ -0.35
DDX41-204ENST00000504807 RBP3P10745 1247 aa12.86□□□□□ -0.35
DDX41-204ENST00000504807 CAPZBP47756 277 aa12.86□□□□□ -0.35
DDX41-204ENST00000504807 VAV2P52735 878 aa12.86□□□□□ -0.35
DDX41-204ENST00000504807 ZNF140P52738 457 aaPredicted RBP12.86□□□□□ -0.35
DDX41-204ENST00000504807 COPS2P61201 443 aa12.86□□□□□ -0.35
DDX41-204ENST00000504807 TMPRSS15P98073 1019 aa12.86□□□□□ -0.35
DDX41-204ENST00000504807 DMPKQ09013 629 aa12.86□□□□□ -0.35
DDX41-204ENST00000504807 KCTD19Q17RG1 926 aaPredicted RBP12.86□□□□□ -0.35
DDX41-204ENST00000504807 ZNF658BQ4V348 819 aaPredicted RBP12.86□□□□□ -0.35
DDX41-204ENST00000504807 TMEM164Q5U3C3 297 aa12.86□□□□□ -0.35
DDX41-204ENST00000504807 CCDC70Q6NSX1 233 aa12.86□□□□□ -0.35
DDX41-204ENST00000504807 FAM92BQ6ZTR7 304 aa12.86□□□□□ -0.35
DDX41-204ENST00000504807 MAMDC2Q7Z304 686 aaPredicted RBP12.86□□□□□ -0.35
DDX41-204ENST00000504807 ABHD17AQ96GS6 310 aa12.86□□□□□ -0.35
DDX41-204ENST00000504807 ELMO2Q96JJ3 720 aa12.86□□□□□ -0.35
DDX41-204ENST00000504807 PPM1MQ96MI6 270 aa12.86□□□□□ -0.35
DDX41-204ENST00000504807 INSM2Q96T92 566 aaPredicted RBP12.86□□□□□ -0.35
DDX41-204ENST00000504807 POT1Q9NUX5 634 aa12.86□□□□□ -0.35
DDX41-204ENST00000504807 SMOXQ9NWM0 555 aa12.86□□□□□ -0.35
DDX41-204ENST00000504807 PIH1D1Q9NWS0 290 aaKnown RBP12.86□□□□□ -0.35
DDX41-204ENST00000504807 FAM8A1Q9UBU6 413 aa12.86□□□□□ -0.35
DDX41-204ENST00000504807 TMEM184BQ9Y519 407 aaPredicted RBP12.86□□□□□ -0.35
DDX41-204ENST00000504807 CAPN6Q9Y6Q1 641 aa12.86□□□□□ -0.35
DDX41-204ENST00000504807 IGHV5-51A0A0C4DH38 117 aa12.85□□□□□ -0.35
DDX41-204ENST00000504807 AGAP14A8MT82 685 aa12.85□□□□□ -0.35
DDX41-204ENST00000504807 LDB2O43679 373 aa12.85□□□□□ -0.35
DDX41-204ENST00000504807 SRP72O76094 671 aaKnown RBP12.85□□□□□ -0.35
DDX41-204ENST00000504807 SLC2A4P14672 509 aa12.85□□□□□ -0.35
DDX41-204ENST00000504807 IDSP22304 550 aa12.85□□□□□ -0.35
DDX41-204ENST00000504807 GEMP55040 296 aa12.85□□□□□ -0.35
DDX41-204ENST00000504807 RAB15P59190 212 aa12.85□□□□□ -0.35
DDX41-204ENST00000504807 KLRB1Q12918 225 aa12.85□□□□□ -0.35
DDX41-204ENST00000504807 KLF1Q13351 362 aaPredicted RBP12.85□□□□□ -0.35
DDX41-204ENST00000504807 KCNAB1Q14722 419 aa12.85□□□□□ -0.35
DDX41-204ENST00000504807 TAF1AQ15573 450 aaPredicted RBP12.85□□□□□ -0.35
DDX41-204ENST00000504807 LACTB2Q53H82 288 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms