RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 NUDCD1Q96RS6 583 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 COQ7Q99807 217 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 CCT7Q99832 543 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 NUDT16L1Q9BRJ7 211 aaKnown RBP2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 ADPGKQ9BRR6 497 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 TBCDQ9BTW9 1192 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 NPLQ9BXD5 320 aaPredicted RBP2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 IFIH1Q9BYX4 1025 aaKnown RBP2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 TRIM4Q9C037 500 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 DNAJC18Q9H819 358 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 C12orf10Q9HB07 376 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 PLEKHA2Q9HB19 425 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 FANCEQ9HB96 536 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZCCHC17Q9NP64 241 aaKnown RBP2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 PLCB1Q9NQ66 1216 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 CYSLTR2Q9NS75 346 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 INTS10Q9NVR2 710 aaKnown RBP2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 EMC3Q9P0I2 261 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 NDUFA13Q9P0J0 144 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 TAAR2Q9P1P5 351 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 PDP2Q9P2J9 529 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 CHORDC1Q9UHD1 332 aaPredicted RBP2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 HOOK1Q9UJC3 728 aaKnown RBP2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 SH3BGRL2Q9UJC5 107 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 TTC7AQ9ULT0 858 aaPredicted RBP2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 TMCO1Q9UM00 188 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 HPCAL4Q9UM19 191 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 CDC14AQ9UNH5 594 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 CHTOPQ9Y3Y2 248 aaKnown RBP2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 CECR2Q9BXF3 1484 aa2.01□□□□□ -2.09
HMGB3P17-201ENST00000504195 ELP1O95163 1332 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 A0A087WV62 115 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 GPR75-ASB3A0A0A6YYF3 556 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 ERICH2A1L162 156 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 HMX3A6NHT5 357 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZNF587BE7ETH6 402 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 E7EVH7 732 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 STX16-NPEPL1H3BU86 382 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 UBXN8O00124 270 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 SGK1O00141 431 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 AP3B1O00203 1094 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 NDUFS8O00217 210 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 CACNB4O00305 520 aaPredicted RBP2□□□□□ -2.09
HMGB3P17-201ENST00000504195 RTCAO00442 366 aaKnown RBP2□□□□□ -2.09
HMGB3P17-201ENST00000504195 TRDMT1O14717 391 aaKnown RBP2□□□□□ -2.09
HMGB3P17-201ENST00000504195 CAPN9O14815 690 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 HAT1O14929 419 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 MID1O15344 667 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 NCAM2O15394 837 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 TEX28O15482 410 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 POLR2DO15514 142 aaKnown RBP2□□□□□ -2.09
HMGB3P17-201ENST00000504195 PIP5K1CO60331 668 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 ATP2C2O75185 946 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 FRAT2O75474 233 aaPredicted RBP2□□□□□ -2.09
HMGB3P17-201ENST00000504195 RGS11O94810 467 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 NDUFB4O95168 129 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 TRIM16O95361 564 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 GUCA1CO95843 209 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 ADAP00813 363 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 CHRNA1P02708 482 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 PYGLP06737 847 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 THEGLP0DJG4 465 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 FGF5P12034 268 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 CAPN3P20807 821 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 GPTP24298 496 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 STX2P32856 288 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 RFC4P35249 363 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 GCKP35557 465 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 SOX6P35712 828 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 SERPINF1P36955 418 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 PIGAP37287 484 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 CD86P42081 329 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 ACADSBP45954 432 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 NR2C2P49116 596 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 GPC3P51654 580 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 RARSP54136 660 aaKnown RBP2□□□□□ -2.09
HMGB3P17-201ENST00000504195 PITX1P78337 314 aaPredicted RBP2□□□□□ -2.09
HMGB3P17-201ENST00000504195 S100A12P80511 92 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 GFPT1Q06210 699 aaPredicted RBP2□□□□□ -2.09
HMGB3P17-201ENST00000504195 GRIK2Q13002 908 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 PPP2R5CQ13362 524 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 PPIGQ13427 754 aaKnown RBP eCLIP2□□□□□ -2.09
HMGB3P17-201ENST00000504195 CUL3Q13618 768 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 CYLC2Q14093 348 aaPredicted RBP2□□□□□ -2.09
HMGB3P17-201ENST00000504195 SCARB2Q14108 478 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 GIT2Q14161 759 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 SQLEQ14534 574 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 BCL2A1Q16548 175 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 CCNG2Q16589 344 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 NDUFA5Q16718 116 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 SHROOM1Q2M3G4 852 aaPredicted RBP2□□□□□ -2.09
HMGB3P17-201ENST00000504195 RGS21Q2M5E4 152 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 CEP55Q53EZ4 464 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 SMUG1Q53HV7 270 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 KRTCAP3Q53RY4 240 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 PPP6R3Q5H9R7 873 aaPredicted RBP2□□□□□ -2.09
HMGB3P17-201ENST00000504195 TCTE1Q5JU00 501 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 CFAP157Q5JU67 520 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms