RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 DSC1Q08554 894 aa14.77□□□□□ -0.05
SNF8-203ENST00000504000 TRAF2Q12933 501 aa14.77□□□□□ -0.05
SNF8-203ENST00000504000 MAD2L1Q13257 205 aaPredicted RBP14.77□□□□□ -0.05
SNF8-203ENST00000504000 IL18R1Q13478 541 aa14.77□□□□□ -0.05
SNF8-203ENST00000504000 ZC3H12BQ5HYM0 836 aaKnown RBP14.77□□□□□ -0.05
SNF8-203ENST00000504000 CTSL3PQ5NE16 218 aa14.77□□□□□ -0.05
SNF8-203ENST00000504000 C6orf141Q5SZD1 244 aa14.77□□□□□ -0.05
SNF8-203ENST00000504000 C16orf87Q6PH81 154 aa14.77□□□□□ -0.05
SNF8-203ENST00000504000 NECAB2Q7Z6G3 386 aa14.77□□□□□ -0.05
SNF8-203ENST00000504000 STK32CQ86UX6 486 aa14.77□□□□□ -0.05
SNF8-203ENST00000504000 ZC3H7AQ8IWR0 971 aaKnown RBP14.77□□□□□ -0.05
SNF8-203ENST00000504000 STK40Q8N2I9 435 aa14.77□□□□□ -0.05
SNF8-203ENST00000504000 CDYL2Q8N8U2 506 aa14.77□□□□□ -0.05
SNF8-203ENST00000504000 MDGA1Q8NFP4 955 aa14.77□□□□□ -0.05
SNF8-203ENST00000504000 METTL6Q8TCB7 284 aa14.77□□□□□ -0.05
SNF8-203ENST00000504000 EEF1AKMT1Q8WVE0 214 aa14.77□□□□□ -0.05
SNF8-203ENST00000504000 SNRNP27Q8WVK2 155 aaKnown RBP14.77□□□□□ -0.05
SNF8-203ENST00000504000 FKBP10Q96AY3 582 aa14.77□□□□□ -0.05
SNF8-203ENST00000504000 PPP3R2Q96LZ3 170 aa14.77□□□□□ -0.05
SNF8-203ENST00000504000 ADAM2Q99965 735 aa14.77□□□□□ -0.05
SNF8-203ENST00000504000 LHPPQ9H008 270 aa14.77□□□□□ -0.05
SNF8-203ENST00000504000 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.77□□□□□ -0.05
SNF8-203ENST00000504000 MAGIXQ9H6Y5 334 aa14.77□□□□□ -0.05
SNF8-203ENST00000504000 USP22Q9UPT9 525 aa14.77□□□□□ -0.05
SNF8-203ENST00000504000 ERGIC3Q9Y282 383 aa14.77□□□□□ -0.05
SNF8-203ENST00000504000 COQ6Q9Y2Z9 468 aa14.77□□□□□ -0.05
SNF8-203ENST00000504000 PCDHGB1Q9Y5G3 927 aa14.77□□□□□ -0.05
SNF8-203ENST00000504000 FUOMA2VDF0 154 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 GOLGA8CPA6NN73 597 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 SYN3O14994 580 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 TBC1D4O60343 1298 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 RSL1D1O76021 490 aaKnown RBP14.76□□□□□ -0.05
SNF8-203ENST00000504000 SCELO95171 688 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 PRLP01236 227 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 G6PDP11413 515 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 TCF3P15923 654 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 ITIH1P19827 911 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 TACR2P21452 398 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 GNA12Q03113 381 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 C9orf131Q5VYM1 1079 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 NIPAL1Q6NVV3 410 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 LETMD1Q6P1Q0 360 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 METTL2BQ6P1Q9 378 aaKnown RBP14.76□□□□□ -0.05
SNF8-203ENST00000504000 R3HCC1LQ7Z5L2 792 aaKnown RBP14.76□□□□□ -0.05
SNF8-203ENST00000504000 ADAMTSL2Q86TH1 951 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 TTC30BQ8N4P2 665 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 ZNF555Q8NEP9 628 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 OR52B6Q8NGF0 335 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 GIPC2Q8TF65 315 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 SLC22A17Q8WUG5 538 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 FBXO32Q969P5 355 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 RMDN1Q96DB5 314 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 LINGO1Q96FE5 620 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 CEP295NLQ96MC4 621 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 PPM1MQ96MI6 270 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 TOR3AQ9H497 397 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 ASIC5Q9NY37 505 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 EIF2B4Q9UI10 523 aaKnown RBP14.76□□□□□ -0.05
SNF8-203ENST00000504000 PDE10AQ9Y233 779 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 TDRKHQ9Y2W6 561 aaKnown RBP14.76□□□□□ -0.05
SNF8-203ENST00000504000 ZNF711Q9Y462 761 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 TTC3P53804 2025 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 SLC12A8A0AV02 714 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 MYADML2A6NDP7 307 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 NCF1BA6NI72 391 aaPredicted RBP14.76□□□□□ -0.05
SNF8-203ENST00000504000 NCF1CA8MVU1 366 aaPredicted RBP14.76□□□□□ -0.05
SNF8-203ENST00000504000 F5H5T6 163 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 KDELR3O43731 214 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 TBX18O95935 607 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 OTCP00480 354 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 MT-ND1P03886 318 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 CAPN1P07384 714 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 RETP07949 1114 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 NCF1P14598 390 aaPredicted RBP14.76□□□□□ -0.05
SNF8-203ENST00000504000 RELAQ04206 551 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 CACNB2Q08289 660 aaPredicted RBP14.76□□□□□ -0.05
SNF8-203ENST00000504000 RFX4Q33E94 735 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 PLA2G4EQ3MJ16 856 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 GNASQ5JWF2 1037 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 C10orf120Q5SQS8 335 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 SDHAF4Q5VUM1 108 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 IL31Q6EBC2 164 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 NADSYN1Q6IA69 706 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 SCIMPQ6UWF3 145 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 CHST15Q7LFX5 561 aaPredicted RBP14.76□□□□□ -0.05
SNF8-203ENST00000504000 RALGPS2Q86X27 583 aaPredicted RBP14.76□□□□□ -0.05
SNF8-203ENST00000504000 CPNE9Q8IYJ1 553 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 CENPSQ8N2Z9 138 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 SIDT2Q8NBJ9 832 aaKnown RBP14.76□□□□□ -0.05
SNF8-203ENST00000504000 CHDHQ8NE62 594 aaPredicted RBP14.76□□□□□ -0.05
SNF8-203ENST00000504000 ZNF548Q8NEK5 533 aaPredicted RBP14.76□□□□□ -0.05
SNF8-203ENST00000504000 OR2T12Q8NG77 320 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 MUL1Q969V5 352 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 ZNF566Q969W8 418 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 SPATA17Q96L03 361 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 ZNF347Q96SE7 839 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 CINPQ9BW66 212 aaPredicted RBP14.76□□□□□ -0.05
SNF8-203ENST00000504000 RAD21L1Q9H4I0 556 aa14.76□□□□□ -0.05
SNF8-203ENST00000504000 UBA2Q9UBT2 640 aaPredicted RBP14.76□□□□□ -0.05
SNF8-203ENST00000504000 CPA4Q9UI42 421 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms