RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 ABRQ12979 859 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 BNIP3Q12983 259 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 RAB33AQ14088 237 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 PPP1R3AQ16821 1122 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 ZNF404Q494X3 552 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 CERKLQ49MI3 558 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 ARMC4Q5T2S8 1044 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 DPP8Q6V1X1 898 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 USP43Q70EL4 1123 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 DGLUCYQ7Z3D6 616 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 PRICKLE2Q7Z3G6 844 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 AMIGO2Q86SJ2 522 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 NLRX1Q86UT6 975 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 FAM35AQ86V20 835 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 C8orf59Q8N0T1 100 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 PLD5Q8N7P1 536 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 LINC00469Q8N7U9 141 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 ANKRD52Q8NB46 1076 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 AP2M1Q96CW1 435 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 SH3YL1Q96HL8 342 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 BTN2A3PQ96KV6 586 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 ART5Q96L15 291 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 HYLS1Q96M11 299 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 COG8Q96MW5 612 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 CCDC115Q96NT0 180 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 APOL2Q9BQE5 337 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 MRPL9Q9BYD2 267 aaKnown RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 KCNN2Q9H2S1 579 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 PPA2Q9H2U2 334 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 R3HDMLQ9H3Y0 253 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 TDRD3Q9H7E2 651 aaKnown RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 C8orf33Q9H7E9 229 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 TRIM45Q9H8W5 580 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 SPON1Q9HCB6 807 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 TBC1D13Q9NVG8 400 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 MRPS18AQ9NVS2 196 aaKnown RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 ICKQ9UPZ9 632 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 TMEM5Q9Y2B1 443 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 TTLL8A6PVC2 850 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 DLGAP1O14490 977 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 GNB5O14775 395 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 SYN3O14994 580 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 NDUFS6O75380 124 aaKnown RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 SEC14L2O76054 403 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 GLP2RO95838 553 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 GJB1P08034 283 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 NAGAP17050 411 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 FCARP24071 287 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 GZMKP49863 264 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 NUDT2P50583 147 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 ATP4BP51164 291 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 KCNQ4P56696 695 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 YBEYP58557 167 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 PPP2R2BQ00005 443 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 LRP8Q14114 963 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 HSD17B12Q53GQ0 312 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 CACHD1Q5VU97 1274 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 SLFN12LQ6IEE8 588 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 ACAD10Q6JQN1 1059 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 DCUN1D2Q6PH85 259 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 CRTC3Q6UUV7 619 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 ZNF782Q6ZMW2 699 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 IGFN1Q86VF2 1251 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 DHFR2Q86XF0 187 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 BRSK1Q8TDC3 778 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 ATP6V1E2Q96A05 226 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 MTG1Q9BT17 334 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 TP63Q9H3D4 680 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 EVA1AQ9H8M9 152 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 SPAG4Q9NPE6 437 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 FAM49BQ9NUQ9 324 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 TMEM39AQ9NV64 488 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 TMEM161AQ9NX61 479 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 SEC14L4Q9UDX3 406 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 CYTH4Q9UIA0 394 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 CDC14AQ9UNH5 594 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 SNX13Q9Y5W8 968 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 ARRDC5A6NEK1 342 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 CEACAM18A8MTB9 384 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 APOC4-APOC2K7ER74 178 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 SLC30A4O14863 429 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 UGT2B11O75310 529 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 LRCH4O75427 683 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 MAP3K6O95382 1288 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 MATN4O95460 622 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 IFNA7P01567 189 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 APOC2P02655 101 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 ITGB2P05107 769 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 PRKACAP17612 351 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 TGM2P21980 687 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 GLDCP23378 1020 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 POU1F1P28069 291 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 STAT3P40763 770 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 SLC15A1P46059 708 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 CPA2P48052 419 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 PSME3P61289 254 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 PAX5Q02548 391 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 DPTQ07507 201 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms