RNA–Protein interactions for RNA: ENST00000503057.5

LIMCH1-205, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-205ENST00000503057 H6PDO95479 791 aa10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 ACADMP11310 421 aa10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 NCK1P16333 377 aa10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 PSMD7P51665 324 aa10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 SMIM11AP58511 58 aa10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 CYP4F3Q08477 520 aa10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 ZBTB6Q15916 424 aa10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 CMPK2Q5EBM0 449 aa10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 TJAP1Q5JTD0 557 aa10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 OR10T2Q8NGX3 314 aa10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 MIPEPQ99797 713 aa10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 SPATA5L1Q9BVQ7 753 aa10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 YIPF1Q9Y548 306 aa10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 ANKRD66B4E2M5 251 aa10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 E7ENX8 843 aa10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 TRMUO75648 421 aaKnown RBP10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 PDE9AO76083 593 aa10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 FABP3P05413 133 aa10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 EPORP19235 508 aa10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 CCNHP51946 323 aaPredicted RBP10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 PWP1Q13610 501 aa10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 DGCR6Q14129 220 aa10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 CNPY1Q3B7I2 92 aa10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 MARCH8Q5T0T0 291 aa10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 FAM91A1Q658Y4 838 aa10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 SERPINA13PQ6UXR4 307 aa10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 ADGRG6Q86SQ4 1221 aa10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 HID1Q8IV36 788 aa10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 HM13Q8TCT9 377 aa10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 MEAF6Q9HAF1 191 aa10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 ATXN10Q9UBB4 475 aa10.63□□□□□ -0.71
LIMCH1-205ENST00000503057 MYL12BO14950 172 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 FESP07332 822 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 GNAZP19086 355 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 SLC6A2P23975 617 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 ARL4DP49703 201 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 SPIBQ01892 262 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 PKDCCQ504Y2 493 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 MORN1Q5T089 497 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 CCNYL2Q5T2Q4 361 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 FAM46CQ5VWP2 391 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 Q96MT0 163 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 NMUR1Q9HB89 426 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 CD320Q9NPF0 282 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 CLN6Q9NWW5 311 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 KCTD3Q9Y597 815 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 CDH1P12830 882 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 IDH2P48735 452 aaKnown RBP10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 RHDQ02161 417 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 BHLHB9Q6PI77 547 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 MRPL10Q7Z7H8 261 aaKnown RBP10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 S100ZQ8WXG8 99 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 CACNA2D2Q9NY47 1150 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 CXCR6O00574 342 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 ARPC2O15144 300 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 CCL16O15467 120 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 CHRNA1P02708 482 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 IGFBP5P24593 272 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 ELP6Q0PNE2 266 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 RGS21Q2M5E4 152 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 CCDC92Q53HC0 331 aaPredicted RBP10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 PHF10Q8WUB8 498 aaKnown RBP10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 ESAMQ96AP7 390 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 SLC7A5P2Q9GIP4 190 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 ABCG8Q9H221 673 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 ADAM30Q9UKF2 790 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 ZCWPW2A0A1B0GU75 182 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 EME2A4GXA9 379 aaPredicted RBP10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 H3BM21 787 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 PRKCGP05129 697 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 CBSLP0DN79 551 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 MYL12AP19105 171 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 CBSP35520 551 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 SLC11A1P49279 550 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 SLC16A1P53985 500 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 RPS14P62263 151 aaKnown RBP10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 LAPTM5Q13571 262 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 ALFQ53S48 1182 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 PHYKPLQ8IUZ5 450 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 ARL10Q8N8L6 244 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 YIPF2Q9BWQ6 316 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 PGAP2Q9UHJ9 254 aa10.62□□□□□ -0.71
LIMCH1-205ENST00000503057 NPPAP01160 153 aa10.61□□□□□ -0.71
LIMCH1-205ENST00000503057 CCR10P46092 362 aa10.61□□□□□ -0.71
LIMCH1-205ENST00000503057 FAM174BQ3ZCQ3 159 aa10.61□□□□□ -0.71
LIMCH1-205ENST00000503057 PDCD4Q53EL6 469 aaKnown RBP10.61□□□□□ -0.71
LIMCH1-205ENST00000503057 RNF19BQ6ZMZ0 732 aa10.61□□□□□ -0.71
LIMCH1-205ENST00000503057 OR10A6Q8NH74 314 aa10.61□□□□□ -0.71
LIMCH1-205ENST00000503057 USP7Q93009 1102 aa10.61□□□□□ -0.71
LIMCH1-205ENST00000503057 ABHD8Q96I13 439 aa10.61□□□□□ -0.71
LIMCH1-205ENST00000503057 ZFYVE19Q96K21 471 aa10.61□□□□□ -0.71
LIMCH1-205ENST00000503057 PKP2Q99959 881 aa10.61□□□□□ -0.71
LIMCH1-205ENST00000503057 HEPHQ9BQS7 1158 aa10.61□□□□□ -0.71
LIMCH1-205ENST00000503057 CHID1Q9BWS9 393 aa10.61□□□□□ -0.71
LIMCH1-205ENST00000503057 TLE6Q9H808 572 aa10.61□□□□□ -0.71
LIMCH1-205ENST00000503057 SOCS7O14512 581 aa10.61□□□□□ -0.71
LIMCH1-205ENST00000503057 BCKDKO14874 412 aa10.61□□□□□ -0.71
LIMCH1-205ENST00000503057 ZNF10P21506 573 aaPredicted RBP10.61□□□□□ -0.71
LIMCH1-205ENST00000503057 HNMTP50135 292 aa10.61□□□□□ -0.71
LIMCH1-205ENST00000503057 DPY19L1Q2PZI1 675 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms