RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 MTHFD1P11586 935 aaKnown RBP5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 FOLR1P15328 257 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 TYRP1P17643 537 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 RPL10P27635 214 aaKnown RBP5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 CASP14P31944 242 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 CD68P34810 354 aaPredicted RBP5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 RORAP35398 523 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 CDKN2BP42772 138 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 TNNT3P45378 269 aaPredicted RBP5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 SEPHS1P49903 392 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 PGDP52209 483 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 RRADP55042 308 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 SOX8P57073 446 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 ADCY2Q08462 1091 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 WASHC5Q12768 1159 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 PLCL1Q15111 1095 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 SLC1A5Q15758 541 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 CHRNA6Q15825 494 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 DNTTIP2Q5QJE6 756 aaKnown RBP5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 ATP1A1-AS1Q5TC04 95 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 FHL5Q5TD97 284 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 ALS2CLQ60I27 953 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 IRGCQ6NXR0 463 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 CRTC3Q6UUV7 619 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 IGFL3Q6UXB1 125 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 MED25Q71SY5 747 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 OOSP2Q86WS3 158 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 KLHDC8BQ8IXV7 354 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 DSELQ8IZU8 1212 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 EFCAB3Q8N7B9 438 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 RASGEF1AQ8N9B8 481 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 OR8K1Q8NGG5 319 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 CPT1CQ8TCG5 803 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 CT55Q8WUE5 264 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 TFB1MQ8WVM0 346 aaKnown RBP5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 CPT1BQ92523 772 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 PNPLA2Q96AD5 504 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 CALR3Q96L12 384 aaKnown RBP5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 MRGPRX2Q96LB1 330 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 AGAP3Q96P47 875 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 PPP1R2P1Q96PQ5 205 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 INSM2Q96T92 566 aaPredicted RBP5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 SMAD5Q99717 465 aaKnown RBP5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 C17orf62Q9BQA9 187 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 SLC25A23Q9BV35 468 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 PITPNM3Q9BZ71 974 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 TFB2MQ9H5Q4 396 aaKnown RBP5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 FANCEQ9HB96 536 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 LRRC4CQ9HCJ2 640 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 ENAMQ9NRM1 1142 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 HRASLS2Q9NWW9 162 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 FEZ2Q9UHY8 353 aaPredicted RBP5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 SLC24A2Q9UI40 661 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 LNPEPQ9UIQ6 1025 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 G3BP2Q9UN86 482 aaKnown RBP5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 PLAAQ9Y263 795 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 FARSAQ9Y285 508 aaKnown RBP5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 EFR3BQ9Y2G0 817 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 DNAJC16Q9Y2G8 782 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 PKP3Q9Y446 797 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 ZNF451Q9Y4E5 1061 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 HEY1Q9Y5J3 304 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 SPO11Q9Y5K1 396 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 ESPL1Q14674 2120 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 SEC16AO15027 2179 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 ANKRD12Q6UB98 2062 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 NBASA2RRP1 2371 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 IGLV3-16A0A075B6K0 115 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 UBA6A0AVT1 1052 aaPredicted RBP5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 C5orf60A6NFR6 353 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 TTLL8A6PVC2 850 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 H7C0S8 307 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 K7EM74 188 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 MEN1O00255 615 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 SCRG1O75711 98 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 ANXA9O76027 345 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 PDGFAP04085 211 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 CAPN1P07384 714 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 PRLHRP49683 370 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 CTSCP53634 463 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 DRG2P55039 364 aaKnown RBP5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 MLLT10P55197 1068 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 WNT3AP56704 352 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 COPS2P61201 443 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 RPA4Q13156 261 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 MSLNQ13421 630 aaPredicted RBP5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 NFE2L1Q14494 772 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 MESDQ14696 234 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 TAF1AQ15573 450 aaPredicted RBP5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 SEPT7Q16181 437 aaKnown RBP5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 PPP2R5EQ16537 467 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 PCSK7Q16549 785 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 GPR33Q49SQ1 333 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 ZNF658BQ4V348 819 aaPredicted RBP5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 ZNF789Q5FWF6 425 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 TFDP3Q5H9I0 405 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 SIRPB2Q5JXA9 342 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 PLEKHS1Q5SXH7 462 aa5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 ZNF648Q5T619 568 aaPredicted RBP5.95□□□□□ -1.46
LSM3P4-201ENST00000502948 GPRC6AQ5T6X5 926 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms