RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 ZNF790Q6PG37 636 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 SH2D5Q6ZV89 423 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 CHST9Q7L1S5 443 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 RSRC2Q7L4I2 434 aaKnown RBP2.3□□□□□ -2.04
SMAD1-203ENST00000502342 DNAJC22Q8N4W6 341 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 ADAD2Q8NCV1 583 aaKnown RBP2.3□□□□□ -2.04
SMAD1-203ENST00000502342 C1orf131Q8NDD1 294 aaKnown RBP2.3□□□□□ -2.04
SMAD1-203ENST00000502342 PPHLN1Q8NEY8 458 aaKnown RBP2.3□□□□□ -2.04
SMAD1-203ENST00000502342 SMPDL3BQ92485 455 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 WBP1Q96G27 269 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 LRR1Q96L50 414 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 NAP1L4Q99733 375 aaKnown RBP2.3□□□□□ -2.04
SMAD1-203ENST00000502342 SRSF8Q9BRL6 282 aaKnown RBP2.3□□□□□ -2.04
SMAD1-203ENST00000502342 RHNO1Q9BSD3 238 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 HGH1Q9BTY7 390 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 SEPT11Q9NVA2 429 aaKnown RBP2.3□□□□□ -2.04
SMAD1-203ENST00000502342 ADPRHL2Q9NX46 363 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 TRMT1Q9NXH9 659 aaKnown RBP2.3□□□□□ -2.04
SMAD1-203ENST00000502342 FBXL17Q9UF56 701 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 ACAD8Q9UKU7 415 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 NENFQ9UMX5 172 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 PCDHGA5Q9Y5G8 931 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 IGKV3D-15A0A087WSY6 115 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 A0A087X0M5 115 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 A0A1B0GX30 115 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 PI4KAP2A4QPH2 592 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 TMEM8BA6NDV4 472 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 LRRC72A6NJI9 287 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 A6NL46 340 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 OR6C76A6NM76 312 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 PTGES3LE9PB15 166 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 PSMD14O00487 310 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 SH2B2O14492 632 aaPredicted RBP2.29□□□□□ -2.04
SMAD1-203ENST00000502342 AP3D1O14617 1153 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 GPR137BO60478 399 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 USO1O60763 962 aaKnown RBP2.29□□□□□ -2.04
SMAD1-203ENST00000502342 GCNT3O95395 438 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 SCGB1D1O95968 90 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 TSHBP01222 138 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 H1F0P07305 194 aaKnown RBP2.29□□□□□ -2.04
SMAD1-203ENST00000502342 PLA2G4BP0C869 781 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 IGHV4-38-2P0DP08 117 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 ERVK-10P10266 1014 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 ACADMP11310 421 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 NMBRP28336 390 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 HOXC8P31273 242 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 MMP15P51511 669 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 CDH11P55287 796 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 SNRPEP62304 92 aaKnown RBP2.29□□□□□ -2.04
SMAD1-203ENST00000502342 KCNC3Q14003 757 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 DLG2Q15700 870 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 ASTE1Q2TB18 679 aaPredicted RBP2.29□□□□□ -2.04
SMAD1-203ENST00000502342 KIAA1644Q3SXP7 199 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 RARS2Q5T160 578 aaKnown RBP2.29□□□□□ -2.04
SMAD1-203ENST00000502342 JADE1Q6IE81 842 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 FAM53AQ6NSI3 398 aaPredicted RBP2.29□□□□□ -2.04
SMAD1-203ENST00000502342 CFAP77Q6ZQR2 320 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 DENND5BQ6ZUT9 1274 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 GALNT13Q8IUC8 556 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 GPALPP1Q8IXQ4 340 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 SCYL3Q8IZE3 742 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 CRYBG2Q8N1P7 616 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 TTC39CQ8N584 583 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 TRIM58Q8NG06 486 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 SENP5Q96HI0 755 aaPredicted RBP2.29□□□□□ -2.04
SMAD1-203ENST00000502342 PGAM5Q96HS1 289 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 FAM81BQ96LP2 452 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 POLR3GLQ9BT43 218 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 TRAF4Q9BUZ4 470 aaPredicted RBP2.29□□□□□ -2.04
SMAD1-203ENST00000502342 EGLN1Q9GZT9 426 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 GFRA4Q9GZZ7 299 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 ZHX3Q9H4I2 956 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 CHMP1AQ9HD42 196 aaPredicted RBP2.29□□□□□ -2.04
SMAD1-203ENST00000502342 OLFML3Q9NRN5 406 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 PAG1Q9NWQ8 432 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 SLC7A7Q9UM01 511 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 KCNJ14Q9UNX9 436 aa2.29□□□□□ -2.04
SMAD1-203ENST00000502342 MRPS28Q9Y2Q9 187 aaKnown RBP2.29□□□□□ -2.04
SMAD1-203ENST00000502342 LAS1LQ9Y4W2 734 aaKnown RBP2.29□□□□□ -2.04
SMAD1-203ENST00000502342 STK36Q9NRP7 1315 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 MED19A0JLT2 244 aaPredicted RBP2.28□□□□□ -2.04
SMAD1-203ENST00000502342 PGPEP1LA6NFU8 196 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 MAGEB17A8MXT2 336 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 NDUFS4O43181 175 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 ZNF821O75541 412 aaPredicted RBP2.28□□□□□ -2.04
SMAD1-203ENST00000502342 RSL1D1O76021 490 aaKnown RBP2.28□□□□□ -2.04
SMAD1-203ENST00000502342 TBX6O95947 436 aaPredicted RBP2.28□□□□□ -2.04
SMAD1-203ENST00000502342 NGFP01138 241 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 IGLV1-44P01699 117 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 ZNF883P0CG24 379 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 SELLP14151 372 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 GABRB1P18505 474 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 PON1P27169 355 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 GNB1P62873 340 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 SPOCK1Q08629 439 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 GAGE2BQ13066 116 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 MFAP5Q13361 173 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 TMEM187Q14656 261 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 GAGE2EQ4V326 116 aa2.28□□□□□ -2.04
SMAD1-203ENST00000502342 RAB6CQ53S08 254 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms