RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 SNRPD1P62314 119 aaKnown RBP3.33□□□□□ -1.88
SMC4-227ENST00000497984 TMEM115Q12893 351 aaPredicted RBP3.33□□□□□ -1.88
SMC4-227ENST00000497984 ALS2CLQ60I27 953 aa3.33□□□□□ -1.88
SMC4-227ENST00000497984 DOK6Q6PKX4 331 aa3.33□□□□□ -1.88
SMC4-227ENST00000497984 ISCA2Q86U28 154 aa3.33□□□□□ -1.88
SMC4-227ENST00000497984 CDC20BQ86Y33 519 aa3.33□□□□□ -1.88
SMC4-227ENST00000497984 ERC1Q8IUD2 1116 aa3.33□□□□□ -1.88
SMC4-227ENST00000497984 DIS3L2Q8IYB7 885 aaKnown RBP3.33□□□□□ -1.88
SMC4-227ENST00000497984 RNF168Q8IYW5 571 aaPredicted RBP3.33□□□□□ -1.88
SMC4-227ENST00000497984 SLC38A9Q8NBW4 561 aa3.33□□□□□ -1.88
SMC4-227ENST00000497984 TMEM116Q8NCL8 245 aa3.33□□□□□ -1.88
SMC4-227ENST00000497984 OR2T12Q8NG77 320 aa3.33□□□□□ -1.88
SMC4-227ENST00000497984 GIMAP5Q96F15 307 aa3.33□□□□□ -1.88
SMC4-227ENST00000497984 C7orf26Q96N11 449 aa3.33□□□□□ -1.88
SMC4-227ENST00000497984 AGAP3Q96P47 875 aa3.33□□□□□ -1.88
SMC4-227ENST00000497984 PCDHB16Q9NRJ7 776 aa3.33□□□□□ -1.88
SMC4-227ENST00000497984 COPG2Q9UBF2 871 aa3.33□□□□□ -1.88
SMC4-227ENST00000497984 TP53TG3Q9ULZ0 132 aa3.33□□□□□ -1.88
SMC4-227ENST00000497984 CLIC4Q9Y696 253 aa3.33□□□□□ -1.88
SMC4-227ENST00000497984 IGLV7-46A0A075B6I9 117 aa3.32□□□□□ -1.88
SMC4-227ENST00000497984 A0A087WW49 117 aa3.32□□□□□ -1.88
SMC4-227ENST00000497984 EIF4E1BA6NMX2 242 aaKnown RBP3.32□□□□□ -1.88
SMC4-227ENST00000497984 PLK4O00444 970 aa3.32□□□□□ -1.88
SMC4-227ENST00000497984 TRMUO75648 421 aaKnown RBP3.32□□□□□ -1.88
SMC4-227ENST00000497984 SLC25A12O75746 678 aa3.32□□□□□ -1.88
SMC4-227ENST00000497984 AP2A2O94973 939 aa3.32□□□□□ -1.88
SMC4-227ENST00000497984 NKX2-2O95096 273 aa3.32□□□□□ -1.88
SMC4-227ENST00000497984 FRMD6-AS1P0C7T7 363 aa3.32□□□□□ -1.88
SMC4-227ENST00000497984 HSPA1AP0DMV8 641 aaKnown RBP3.32□□□□□ -1.88
SMC4-227ENST00000497984 HSPA1BP0DMV9 641 aaKnown RBP3.32□□□□□ -1.88
SMC4-227ENST00000497984 ACADSP16219 412 aa3.32□□□□□ -1.88
SMC4-227ENST00000497984 NFKBIAP25963 317 aa3.32□□□□□ -1.88
SMC4-227ENST00000497984 CCR9P51686 369 aa3.32□□□□□ -1.88
SMC4-227ENST00000497984 F2RL1P55085 397 aa3.32□□□□□ -1.88
SMC4-227ENST00000497984 MRPS34P82930 218 aaKnown RBP3.32□□□□□ -1.88
SMC4-227ENST00000497984 TFAP4Q01664 338 aa3.32□□□□□ -1.88
SMC4-227ENST00000497984 GOLGA8DPQ0D2H9 430 aa3.32□□□□□ -1.88
SMC4-227ENST00000497984 CDC16Q13042 620 aa3.32□□□□□ -1.88
SMC4-227ENST00000497984 RIGQ13278 110 aa3.32□□□□□ -1.88
SMC4-227ENST00000497984 PDE1CQ14123 709 aaPredicted RBP3.32□□□□□ -1.88
SMC4-227ENST00000497984 NDUFAF5Q5TEU4 345 aa3.32□□□□□ -1.88
SMC4-227ENST00000497984 TRIM65Q6PJ69 517 aa3.32□□□□□ -1.88
SMC4-227ENST00000497984 FBXL16Q8N461 479 aa3.32□□□□□ -1.88
SMC4-227ENST00000497984 LAT2Q9GZY6 243 aa3.32□□□□□ -1.88
SMC4-227ENST00000497984 CWC15Q9P013 229 aaKnown RBP3.32□□□□□ -1.88
SMC4-227ENST00000497984 FBXW11Q9UKB1 542 aa3.32□□□□□ -1.88
SMC4-227ENST00000497984 KLK13Q9UKR3 277 aa3.32□□□□□ -1.88
SMC4-227ENST00000497984 PRRC2AP48634 2157 aaKnown RBP3.31□□□□□ -1.88
SMC4-227ENST00000497984 IGHV4-4A0A075B6R2 117 aa3.31□□□□□ -1.88
SMC4-227ENST00000497984 MAP2K7O14733 419 aa3.31□□□□□ -1.88
SMC4-227ENST00000497984 SCAMP1O15126 338 aa3.31□□□□□ -1.88
SMC4-227ENST00000497984 NDUFS3O75489 264 aa3.31□□□□□ -1.88
SMC4-227ENST00000497984 CSPG5O95196 566 aa3.31□□□□□ -1.88
SMC4-227ENST00000497984 RTN3O95197 1032 aaPredicted RBP3.31□□□□□ -1.88
SMC4-227ENST00000497984 DDX58O95786 925 aaKnown RBP3.31□□□□□ -1.88
SMC4-227ENST00000497984 RAF1P04049 648 aa3.31□□□□□ -1.88
SMC4-227ENST00000497984 EDN1P05305 212 aa3.31□□□□□ -1.88
SMC4-227ENST00000497984 PRCPP42785 496 aa3.31□□□□□ -1.88
SMC4-227ENST00000497984 CTSCP53634 463 aa3.31□□□□□ -1.88
SMC4-227ENST00000497984 NIPAL4Q0D2K0 466 aa3.31□□□□□ -1.88
SMC4-227ENST00000497984 FRG1Q14331 258 aaKnown RBP3.31□□□□□ -1.88
SMC4-227ENST00000497984 PNLIPRP3Q17RR3 467 aa3.31□□□□□ -1.88
SMC4-227ENST00000497984 ZNF805Q5CZA5 627 aa3.31□□□□□ -1.88
SMC4-227ENST00000497984 JAKMIP3Q5VZ66 844 aa3.31□□□□□ -1.88
SMC4-227ENST00000497984 Q6ZSR9 355 aa3.31□□□□□ -1.88
SMC4-227ENST00000497984 SEPT14Q6ZU15 432 aa3.31□□□□□ -1.88
SMC4-227ENST00000497984 KRTAP5-5Q701N2 237 aaPredicted RBP3.31□□□□□ -1.88
SMC4-227ENST00000497984 PTOV1Q86YD1 416 aa3.31□□□□□ -1.88
SMC4-227ENST00000497984 PLD3Q8IV08 490 aa3.31□□□□□ -1.88
SMC4-227ENST00000497984 ARHGAP12Q8IWW6 846 aa3.31□□□□□ -1.88
SMC4-227ENST00000497984 LMNTD2Q8IXW0 634 aa3.31□□□□□ -1.88
SMC4-227ENST00000497984 SLC5A8Q8N695 610 aa3.31□□□□□ -1.88
SMC4-227ENST00000497984 GCSAMQ8N6F7 178 aa3.31□□□□□ -1.88
SMC4-227ENST00000497984 PAF1Q8N7H5 531 aa3.31□□□□□ -1.88
SMC4-227ENST00000497984 SEMA3CQ99985 751 aa3.31□□□□□ -1.88
SMC4-227ENST00000497984 SLC26A6Q9BXS9 759 aa3.31□□□□□ -1.88
SMC4-227ENST00000497984 PELI2Q9HAT8 420 aa3.31□□□□□ -1.88
SMC4-227ENST00000497984 RANGRFQ9HD47 186 aaPredicted RBP3.31□□□□□ -1.88
SMC4-227ENST00000497984 COQ3Q9NZJ6 369 aa3.31□□□□□ -1.88
SMC4-227ENST00000497984 LIMA1Q9UHB6 759 aaKnown RBP3.31□□□□□ -1.88
SMC4-227ENST00000497984 TMEM184BQ9Y519 407 aaPredicted RBP3.31□□□□□ -1.88
SMC4-227ENST00000497984 KCNE2Q9Y6J6 123 aa3.31□□□□□ -1.88
SMC4-227ENST00000497984 TDRD9Q8NDG6 1382 aaKnown RBP3.3□□□□□ -1.88
SMC4-227ENST00000497984 A8MU10 97 aa3.3□□□□□ -1.88
SMC4-227ENST00000497984 CREB3O43889 395 aa3.3□□□□□ -1.88
SMC4-227ENST00000497984 GPR137BO60478 399 aa3.3□□□□□ -1.88
SMC4-227ENST00000497984 BMP10O95393 424 aa3.3□□□□□ -1.88
SMC4-227ENST00000497984 SPARCP09486 303 aa3.3□□□□□ -1.88
SMC4-227ENST00000497984 ATP1A3P13637 1013 aa3.3□□□□□ -1.88
SMC4-227ENST00000497984 TAS2R40P59535 323 aa3.3□□□□□ -1.88
SMC4-227ENST00000497984 LRMPQ12912 555 aa3.3□□□□□ -1.88
SMC4-227ENST00000497984 ARHGEF16Q5VV41 709 aa3.3□□□□□ -1.88
SMC4-227ENST00000497984 SARM1Q6SZW1 724 aa3.3□□□□□ -1.88
SMC4-227ENST00000497984 TMTC3Q6ZXV5 915 aa3.3□□□□□ -1.88
SMC4-227ENST00000497984 RSRC2Q7L4I2 434 aaKnown RBP3.3□□□□□ -1.88
SMC4-227ENST00000497984 CNTROBQ8N137 903 aa3.3□□□□□ -1.88
SMC4-227ENST00000497984 RASGEF1CQ8N431 466 aa3.3□□□□□ -1.88
SMC4-227ENST00000497984 C1orf52Q8N6N3 182 aaKnown RBP3.3□□□□□ -1.88
SMC4-227ENST00000497984 LINC00612Q8N6U2 182 aa3.3□□□□□ -1.88
SMC4-227ENST00000497984 EMC1Q8N766 993 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms