RNA–Protein interactions for RNA: ENST00000497822.5

C1orf61-223, Transcript of chromosome 1 open reading frame 61, human

TSL 2

Gene C1orf61, Length 542 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1orf61-223	ENST00000497822	PWWP2B	Q6NUJ5	590 aa		18.85	■□□□□ 0.61
C1orf61-223	ENST00000497822	AADACL2	Q6P093	401 aa		18.85	■□□□□ 0.61
C1orf61-223	ENST00000497822	FBXO38	Q6PIJ6	1188 aa		18.85	■□□□□ 0.61
C1orf61-223	ENST00000497822	LILRA3	Q8N6C8	439 aa	Predicted RBP	18.85	■□□□□ 0.61
C1orf61-223	ENST00000497822	OR4K2	Q8NGD2	314 aa		18.85	■□□□□ 0.61
C1orf61-223	ENST00000497822	C9orf43	Q8TAL5	461 aa	Predicted RBP	18.85	■□□□□ 0.61
C1orf61-223	ENST00000497822	APOBEC4	Q8WW27	367 aa	Known RBP	18.85	■□□□□ 0.61
C1orf61-223	ENST00000497822	STAMBPL1	Q96FJ0	436 aa		18.85	■□□□□ 0.61
C1orf61-223	ENST00000497822	PPM1M	Q96MI6	270 aa		18.85	■□□□□ 0.61
C1orf61-223	ENST00000497822	MAP3K3	Q99759	626 aa		18.85	■□□□□ 0.61
C1orf61-223	ENST00000497822	GBA3	Q9H227	469 aa		18.85	■□□□□ 0.61
C1orf61-223	ENST00000497822	FAM96A	Q9H5X1	160 aa		18.85	■□□□□ 0.61
C1orf61-223	ENST00000497822	IMP3	Q9NV31	184 aa	Known RBP	18.85	■□□□□ 0.61
C1orf61-223	ENST00000497822	FKBPL	Q9UIM3	349 aa		18.85	■□□□□ 0.61
C1orf61-223	ENST00000497822	TUBD1	Q9UJT1	453 aa		18.85	■□□□□ 0.61
C1orf61-223	ENST00000497822	TRHDE	Q9UKU6	1024 aa		18.85	■□□□□ 0.61
C1orf61-223	ENST00000497822	DUSP10	Q9Y6W6	482 aa		18.85	■□□□□ 0.61
C1orf61-223	ENST00000497822	CCL22	O00626	93 aa		18.84	■□□□□ 0.61
C1orf61-223	ENST00000497822	SGTA	O43765	313 aa		18.84	■□□□□ 0.61
C1orf61-223	ENST00000497822	PRAMEF1	O95521	474 aa		18.84	■□□□□ 0.61
C1orf61-223	ENST00000497822	EBLN1	P0CF75	366 aa		18.84	■□□□□ 0.61
C1orf61-223	ENST00000497822	MSH3	P20585	1137 aa		18.84	■□□□□ 0.61
C1orf61-223	ENST00000497822	AKT1	P31749	480 aa		18.84	■□□□□ 0.61
C1orf61-223	ENST00000497822	ADRA1A	P35348	466 aa		18.84	■□□□□ 0.61
C1orf61-223	ENST00000497822	ARCN1	P48444	511 aa	Known RBP	18.84	■□□□□ 0.61
C1orf61-223	ENST00000497822	OTUD4	Q01804	1114 aa	Known RBP	18.84	■□□□□ 0.61
C1orf61-223	ENST00000497822	MSLN	Q13421	630 aa	Predicted RBP	18.84	■□□□□ 0.61
C1orf61-223	ENST00000497822	SPARCL1	Q14515	664 aa		18.84	■□□□□ 0.61
C1orf61-223	ENST00000497822	C11orf63	Q6NUN7	778 aa		18.84	■□□□□ 0.61
C1orf61-223	ENST00000497822	RANBP10	Q6VN20	620 aa		18.84	■□□□□ 0.61
C1orf61-223	ENST00000497822	DAAM2	Q86T65	1068 aa		18.84	■□□□□ 0.61
C1orf61-223	ENST00000497822	ACTL9	Q8TC94	416 aa		18.84	■□□□□ 0.61
C1orf61-223	ENST00000497822	CT55	Q8WUE5	264 aa		18.84	■□□□□ 0.61
C1orf61-223	ENST00000497822	SLC41A2	Q96JW4	573 aa		18.84	■□□□□ 0.61
C1orf61-223	ENST00000497822	NRTN	Q99748	197 aa		18.84	■□□□□ 0.61
C1orf61-223	ENST00000497822	ANP32E	Q9BTT0	268 aa		18.84	■□□□□ 0.61
C1orf61-223	ENST00000497822	FSD1L	Q9BXM9	530 aa		18.84	■□□□□ 0.61
C1orf61-223	ENST00000497822	ZCCHC2	Q9C0B9	1178 aa	Known RBP	18.84	■□□□□ 0.61
C1orf61-223	ENST00000497822	RAB33B	Q9H082	229 aa		18.84	■□□□□ 0.61
C1orf61-223	ENST00000497822	SEMA5B	Q9P283	1151 aa		18.84	■□□□□ 0.61
C1orf61-223	ENST00000497822	KCNMB2	Q9Y691	235 aa		18.84	■□□□□ 0.61
C1orf61-223	ENST00000497822	SPEN	Q96T58	3664 aa	Known RBP	18.84	■□□□□ 0.61
C1orf61-223	ENST00000497822	APOC4-APOC2	K7ER74	178 aa		18.83	■□□□□ 0.6
C1orf61-223	ENST00000497822	DDX3Y	O15523	660 aa	Known RBP	18.83	■□□□□ 0.6
C1orf61-223	ENST00000497822	KCNJ13	O60928	360 aa		18.83	■□□□□ 0.6
C1orf61-223	ENST00000497822	APOC2	P02655	101 aa		18.83	■□□□□ 0.6
C1orf61-223	ENST00000497822	NTRK1	P04629	796 aa		18.83	■□□□□ 0.6
C1orf61-223	ENST00000497822	POLB	P06746	335 aa		18.83	■□□□□ 0.6
C1orf61-223	ENST00000497822	MTHFD1	P11586	935 aa	Known RBP	18.83	■□□□□ 0.6
C1orf61-223	ENST00000497822	PSMB4	P28070	264 aa		18.83	■□□□□ 0.6
C1orf61-223	ENST00000497822	GEM	P55040	296 aa		18.83	■□□□□ 0.6
C1orf61-223	ENST00000497822	TMPRSS15	P98073	1019 aa		18.83	■□□□□ 0.6
C1orf61-223	ENST00000497822	XIAP	P98170	497 aa		18.83	■□□□□ 0.6
C1orf61-223	ENST00000497822	MC1R	Q01726	317 aa		18.83	■□□□□ 0.6
C1orf61-223	ENST00000497822	XRCC4	Q13426	336 aa		18.83	■□□□□ 0.6
C1orf61-223	ENST00000497822	ITGA9	Q13797	1035 aa		18.83	■□□□□ 0.6
C1orf61-223	ENST00000497822	PLCL1	Q15111	1095 aa		18.83	■□□□□ 0.6
C1orf61-223	ENST00000497822	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	18.83	■□□□□ 0.6
C1orf61-223	ENST00000497822	FAM199X	Q6PEV8	388 aa	Predicted RBP	18.83	■□□□□ 0.6
C1orf61-223	ENST00000497822	PPP1R3B	Q86XI6	285 aa		18.83	■□□□□ 0.6
C1orf61-223	ENST00000497822	SIDT2	Q8NBJ9	832 aa	Known RBP	18.83	■□□□□ 0.6
C1orf61-223	ENST00000497822	RBM41	Q96IZ5	413 aa	Known RBP	18.83	■□□□□ 0.6
C1orf61-223	ENST00000497822	TRIM5	Q9C035	493 aa		18.83	■□□□□ 0.6
C1orf61-223	ENST00000497822	ASB8	Q9H765	288 aa		18.83	■□□□□ 0.6
C1orf61-223	ENST00000497822	SMOX	Q9NWM0	555 aa		18.83	■□□□□ 0.6
C1orf61-223	ENST00000497822	HRASLS2	Q9NWW9	162 aa		18.83	■□□□□ 0.6
C1orf61-223	ENST00000497822	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	18.83	■□□□□ 0.6
C1orf61-223	ENST00000497822	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	18.83	■□□□□ 0.6
C1orf61-223	ENST00000497822	NAV2	Q8IVL1	2488 aa		18.82	■□□□□ 0.6
C1orf61-223	ENST00000497822	MACROD2	A1Z1Q3	448 aa		18.82	■□□□□ 0.6
C1orf61-223	ENST00000497822	CDC14C	A4D256	554 aa		18.82	■□□□□ 0.6
C1orf61-223	ENST00000497822	GOLGA6L3	A6NEY3	463 aa		18.82	■□□□□ 0.6
C1orf61-223	ENST00000497822	MGAT4D	A6NG13	374 aa		18.82	■□□□□ 0.6
C1orf61-223	ENST00000497822	LPO	P22079	712 aa	Predicted RBP	18.82	■□□□□ 0.6
C1orf61-223	ENST00000497822	TUBB3	Q13509	450 aa		18.82	■□□□□ 0.6
C1orf61-223	ENST00000497822	SPA17	Q15506	151 aa		18.82	■□□□□ 0.6
C1orf61-223	ENST00000497822	TAF1A	Q15573	450 aa	Predicted RBP	18.82	■□□□□ 0.6
C1orf61-223	ENST00000497822	LONRF2	Q1L5Z9	754 aa		18.82	■□□□□ 0.6
C1orf61-223	ENST00000497822	ANKRD20A2	Q5SQ80	823 aa		18.82	■□□□□ 0.6
C1orf61-223	ENST00000497822	CCDC181	Q5TID7	509 aa		18.82	■□□□□ 0.6
C1orf61-223	ENST00000497822	ANKRD20A1	Q5TYW2	823 aa		18.82	■□□□□ 0.6
C1orf61-223	ENST00000497822	ANKRD20A3	Q5VUR7	823 aa		18.82	■□□□□ 0.6
C1orf61-223	ENST00000497822	OR13C4	Q8NGS5	318 aa		18.82	■□□□□ 0.6
C1orf61-223	ENST00000497822	CCDC110	Q8TBZ0	833 aa		18.82	■□□□□ 0.6
C1orf61-223	ENST00000497822	RMDN2	Q96LZ7	410 aa		18.82	■□□□□ 0.6
C1orf61-223	ENST00000497822	C12orf66	Q96MD2	445 aa		18.82	■□□□□ 0.6
C1orf61-223	ENST00000497822	PADI1	Q9ULC6	663 aa		18.82	■□□□□ 0.6
C1orf61-223	ENST00000497822	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	18.82	■□□□□ 0.6
C1orf61-223	ENST00000497822	PIPSL	A2A3N6	862 aa		18.81	■□□□□ 0.6
C1orf61-223	ENST00000497822	OR6C74	A6NCV1	312 aa		18.81	■□□□□ 0.6
C1orf61-223	ENST00000497822	OR5K3	A6NET4	321 aa		18.81	■□□□□ 0.6
C1orf61-223	ENST00000497822	SOWAHD	A6NJG2	315 aa		18.81	■□□□□ 0.6
C1orf61-223	ENST00000497822	ANXA9	O76027	345 aa		18.81	■□□□□ 0.6
C1orf61-223	ENST00000497822	SRP72	O76094	671 aa	Known RBP	18.81	■□□□□ 0.6
C1orf61-223	ENST00000497822	CCNYL3	P0C7X3	344 aa		18.81	■□□□□ 0.6
C1orf61-223	ENST00000497822	CDKN1C	P49918	316 aa	Predicted RBP	18.81	■□□□□ 0.6
C1orf61-223	ENST00000497822	EIF3E	P60228	445 aa	Known RBP	18.81	■□□□□ 0.6
C1orf61-223	ENST00000497822	DNASE1L3	Q13609	305 aa		18.81	■□□□□ 0.6
C1orf61-223	ENST00000497822	GPR19	Q15760	415 aa		18.81	■□□□□ 0.6
C1orf61-223	ENST00000497822	CRTC2	Q53ET0	693 aa	Predicted RBP	18.81	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms