RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 NAT9Q9BTE0 207 aa18.87■□□□□ 0.61
CTDSP1-213ENST00000496785 AKAP7Q9P0M2 348 aaPredicted RBP18.87■□□□□ 0.61
CTDSP1-213ENST00000496785 DKK4Q9UBT3 224 aa18.87■□□□□ 0.61
CTDSP1-213ENST00000496785 VPS9D1Q9Y2B5 631 aa18.87■□□□□ 0.61
CTDSP1-213ENST00000496785 ENTPD2Q9Y5L3 495 aa18.87■□□□□ 0.61
CTDSP1-213ENST00000496785 HEBP2Q9Y5Z4 205 aa18.87■□□□□ 0.61
CTDSP1-213ENST00000496785 MAD1L1Q9Y6D9 718 aa18.87■□□□□ 0.61
CTDSP1-213ENST00000496785 CCDC187A0A096LP49 1063 aa18.86■□□□□ 0.61
CTDSP1-213ENST00000496785 EFCAB8A8MWE9 144 aa18.86■□□□□ 0.61
CTDSP1-213ENST00000496785 C1QTNF9BB2RNN3 333 aa18.86■□□□□ 0.61
CTDSP1-213ENST00000496785 LIN7AO14910 233 aaPredicted RBP18.86■□□□□ 0.61
CTDSP1-213ENST00000496785 TTI1O43156 1089 aa18.86■□□□□ 0.61
CTDSP1-213ENST00000496785 NDUFS3O75489 264 aa18.86■□□□□ 0.61
CTDSP1-213ENST00000496785 VAPBO95292 243 aa18.86■□□□□ 0.61
CTDSP1-213ENST00000496785 C1QTNF9P0C862 333 aa18.86■□□□□ 0.61
CTDSP1-213ENST00000496785 NDUFS1P28331 727 aa18.86■□□□□ 0.61
CTDSP1-213ENST00000496785 SLC19A1P41440 591 aa18.86■□□□□ 0.61
CTDSP1-213ENST00000496785 KCTD19Q17RG1 926 aaPredicted RBP18.86■□□□□ 0.61
CTDSP1-213ENST00000496785 FAM83HQ6ZRV2 1179 aaPredicted RBP18.86■□□□□ 0.61
CTDSP1-213ENST00000496785 TMEM26Q6ZUK4 368 aa18.86■□□□□ 0.61
CTDSP1-213ENST00000496785 LRRC6Q86X45 466 aa18.86■□□□□ 0.61
CTDSP1-213ENST00000496785 LMNTD2Q8IXW0 634 aa18.86■□□□□ 0.61
CTDSP1-213ENST00000496785 CFAP206Q8IYR0 622 aa18.86■□□□□ 0.61
CTDSP1-213ENST00000496785 CLDN19Q8N6F1 224 aa18.86■□□□□ 0.61
CTDSP1-213ENST00000496785 ZNF669Q96BR6 464 aaPredicted RBP18.86■□□□□ 0.61
CTDSP1-213ENST00000496785 CNTNAP3BQ96NU0 1288 aa18.86■□□□□ 0.61
CTDSP1-213ENST00000496785 TCF12Q99081 682 aa18.86■□□□□ 0.61
CTDSP1-213ENST00000496785 CNTNAP3Q9BZ76 1288 aa18.86■□□□□ 0.61
CTDSP1-213ENST00000496785 SCHIP1Q9P0W5 487 aaPredicted RBP18.86■□□□□ 0.61
CTDSP1-213ENST00000496785 ZNF624Q9P2J8 865 aaPredicted RBP18.86■□□□□ 0.61
CTDSP1-213ENST00000496785 AK5Q9Y6K8 562 aa18.86■□□□□ 0.61
CTDSP1-213ENST00000496785 RPS6KL1Q9Y6S9 549 aa18.86■□□□□ 0.61
CTDSP1-213ENST00000496785 OR52A4PA6NMU1 304 aa18.85■□□□□ 0.61
CTDSP1-213ENST00000496785 IFRD1O00458 451 aaPredicted RBP18.85■□□□□ 0.61
CTDSP1-213ENST00000496785 PRMT5O14744 637 aaPredicted RBP18.85■□□□□ 0.61
CTDSP1-213ENST00000496785 USP1O94782 785 aa18.85■□□□□ 0.61
CTDSP1-213ENST00000496785 POLBP06746 335 aa18.85■□□□□ 0.61
CTDSP1-213ENST00000496785 OGNP20774 298 aaKnown RBP18.85■□□□□ 0.61
CTDSP1-213ENST00000496785 CD1CP29017 333 aa18.85■□□□□ 0.61
CTDSP1-213ENST00000496785 TRA2AQ13595 282 aaKnown RBP eCLIP18.85■□□□□ 0.61
CTDSP1-213ENST00000496785 TMEM135Q86UB9 458 aa18.85■□□□□ 0.61
CTDSP1-213ENST00000496785 MARCH9Q86YJ5 346 aa18.85■□□□□ 0.61
CTDSP1-213ENST00000496785 PDIK1LQ8N165 341 aa18.85■□□□□ 0.61
CTDSP1-213ENST00000496785 WDR36Q8NI36 951 aaKnown RBP18.85■□□□□ 0.61
CTDSP1-213ENST00000496785 CALML6Q8TD86 181 aa18.85■□□□□ 0.61
CTDSP1-213ENST00000496785 ZFPM2Q8WW38 1151 aa18.85■□□□□ 0.61
CTDSP1-213ENST00000496785 CCDC97Q96F63 343 aaPredicted RBP18.85■□□□□ 0.61
CTDSP1-213ENST00000496785 STAMBPL1Q96FJ0 436 aa18.85■□□□□ 0.61
CTDSP1-213ENST00000496785 C12orf66Q96MD2 445 aa18.85■□□□□ 0.61
CTDSP1-213ENST00000496785 TRIM51Q9BSJ1 452 aa18.85■□□□□ 0.61
CTDSP1-213ENST00000496785 COG4Q9H9E3 785 aa18.85■□□□□ 0.61
CTDSP1-213ENST00000496785 POLR1BQ9H9Y6 1135 aa18.85■□□□□ 0.61
CTDSP1-213ENST00000496785 EPB41L5Q9HCM4 733 aa18.85■□□□□ 0.61
CTDSP1-213ENST00000496785 SLC40A1Q9NP59 571 aa18.85■□□□□ 0.61
CTDSP1-213ENST00000496785 IMP3Q9NV31 184 aaKnown RBP18.85■□□□□ 0.61
CTDSP1-213ENST00000496785 FAM8A1Q9UBU6 413 aa18.85■□□□□ 0.61
CTDSP1-213ENST00000496785 ATXN7L1Q9ULK2 861 aaPredicted RBP18.85■□□□□ 0.61
CTDSP1-213ENST00000496785 PSMD13Q9UNM6 376 aa18.85■□□□□ 0.61
CTDSP1-213ENST00000496785 PCDHB1Q9Y5F3 818 aa18.85■□□□□ 0.61
CTDSP1-213ENST00000496785 COLEC10Q9Y6Z7 277 aa18.85■□□□□ 0.61
CTDSP1-213ENST00000496785 KNTC1P50748 2209 aa18.85■□□□□ 0.61
CTDSP1-213ENST00000496785 TTC4O95801 387 aa18.84■□□□□ 0.61
CTDSP1-213ENST00000496785 MTHFD1P11586 935 aaKnown RBP18.84■□□□□ 0.61
CTDSP1-213ENST00000496785 IVDP26440 423 aa18.84■□□□□ 0.61
CTDSP1-213ENST00000496785 MLLT3P42568 568 aaPredicted RBP18.84■□□□□ 0.61
CTDSP1-213ENST00000496785 LSSP48449 732 aa18.84■□□□□ 0.61
CTDSP1-213ENST00000496785 CD151P48509 253 aa18.84■□□□□ 0.61
CTDSP1-213ENST00000496785 THOC5Q13769 683 aaKnown RBP18.84■□□□□ 0.61
CTDSP1-213ENST00000496785 TUBB2AQ13885 445 aa18.84■□□□□ 0.61
CTDSP1-213ENST00000496785 CLCA4Q14CN2 919 aa18.84■□□□□ 0.61
CTDSP1-213ENST00000496785 RPE65Q16518 533 aa18.84■□□□□ 0.61
CTDSP1-213ENST00000496785 ANKRD20A4Q4UJ75 823 aa18.84■□□□□ 0.61
CTDSP1-213ENST00000496785 SYTL3Q4VX76 610 aa18.84■□□□□ 0.61
CTDSP1-213ENST00000496785 KLHL35Q6PF15 583 aa18.84■□□□□ 0.61
CTDSP1-213ENST00000496785 WDR74Q6RFH5 385 aaPredicted RBP18.84■□□□□ 0.61
CTDSP1-213ENST00000496785 CES3Q6UWW8 571 aa18.84■□□□□ 0.61
CTDSP1-213ENST00000496785 OR4D9Q8NGE8 314 aa18.84■□□□□ 0.61
CTDSP1-213ENST00000496785 GPR150Q8NGU9 434 aa18.84■□□□□ 0.61
CTDSP1-213ENST00000496785 ZCCHC14Q8WYQ9 949 aaKnown RBP18.84■□□□□ 0.61
CTDSP1-213ENST00000496785 ELMO1Q92556 727 aa18.84■□□□□ 0.61
CTDSP1-213ENST00000496785 LRRC39Q96DD0 335 aa18.84■□□□□ 0.61
CTDSP1-213ENST00000496785 ATXN7L3BQ96GX2 97 aa18.84■□□□□ 0.61
CTDSP1-213ENST00000496785 SIGLEC10Q96LC7 697 aa18.84■□□□□ 0.61
CTDSP1-213ENST00000496785 PANX3Q96QZ0 392 aa18.84■□□□□ 0.61
CTDSP1-213ENST00000496785 TUBB2BQ9BVA1 445 aa18.84■□□□□ 0.61
CTDSP1-213ENST00000496785 WWP1Q9H0M0 922 aa18.84■□□□□ 0.61
CTDSP1-213ENST00000496785 GNPTGQ9UJJ9 305 aa18.84■□□□□ 0.61
CTDSP1-213ENST00000496785 CDC23Q9UJX2 597 aa18.84■□□□□ 0.61
CTDSP1-213ENST00000496785 WDR37Q9Y2I8 494 aa18.84■□□□□ 0.61
CTDSP1-213ENST00000496785 H3BMM5 538 aa18.83■□□□□ 0.6
CTDSP1-213ENST00000496785 URI1O94763 535 aaPredicted RBP18.83■□□□□ 0.6
CTDSP1-213ENST00000496785 SEC31AO94979 1220 aaKnown RBP18.83■□□□□ 0.6
CTDSP1-213ENST00000496785 AMD1P17707 334 aa18.83■□□□□ 0.6
CTDSP1-213ENST00000496785 PGAM1P18669 254 aa18.83■□□□□ 0.6
CTDSP1-213ENST00000496785 RPS3P23396 243 aaKnown RBP eCLIP18.83■□□□□ 0.6
CTDSP1-213ENST00000496785 PDX1P52945 283 aa18.83■□□□□ 0.6
CTDSP1-213ENST00000496785 ARL4CP56559 192 aa18.83■□□□□ 0.6
CTDSP1-213ENST00000496785 GABREP78334 506 aa18.83■□□□□ 0.6
CTDSP1-213ENST00000496785 ZFP36L1Q07352 338 aaKnown RBP18.83■□□□□ 0.6
CTDSP1-213ENST00000496785 CALCOCO2Q13137 446 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms