RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 EEDO75530 441 aaKnown RBP12.85□□□□□ -0.35
GARNL3-220ENST00000496711 SLC22A3O75751 556 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 GUCA1CO95843 209 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 ZCCHC18P0CG32 403 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 PIM1P11309 404 aaPredicted RBP12.85□□□□□ -0.35
GARNL3-220ENST00000496711 ATP6V1B2P21281 511 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 SLC7A1P30825 629 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 CCR2P41597 374 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 NSG1P42857 185 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 ZFP36L2P47974 494 aaKnown RBP12.85□□□□□ -0.35
GARNL3-220ENST00000496711 HSPA13P48723 471 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 HTR6P50406 440 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 CCNHP51946 323 aaPredicted RBP12.85□□□□□ -0.35
GARNL3-220ENST00000496711 TRAF3Q13114 568 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 NFYCQ13952 458 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 CAPRIN1Q14444 709 aaKnown RBP12.85□□□□□ -0.35
GARNL3-220ENST00000496711 PDK3Q15120 406 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 CRY1Q16526 586 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 SPATS1Q496A3 300 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 IRAK1BP1Q5VVH5 260 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 IL27RAQ6UWB1 636 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 SLC15A3Q8IY34 581 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 FNDC5Q8NAU1 212 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 OR2T34Q8NGX1 318 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 OR2T3Q8NH03 318 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 PIP4K2CQ8TBX8 421 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 UBTD2Q8WUN7 234 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 PAWRQ96IZ0 340 aaKnown RBP12.85□□□□□ -0.35
GARNL3-220ENST00000496711 MCCC1Q96RQ3 725 aaPredicted RBP12.85□□□□□ -0.35
GARNL3-220ENST00000496711 EGFL8Q99944 293 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 EFHD1Q9BUP0 239 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 CPEB1Q9BZB8 566 aaKnown RBP12.85□□□□□ -0.35
GARNL3-220ENST00000496711 SUV39H2Q9H5I1 410 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 HCFC1R1Q9NWW0 138 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 ELOVL2Q9NXB9 296 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 WWOXQ9NZC7 414 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 SUN2Q9UH99 717 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 PPIL1Q9Y3C6 166 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 ASPDHA6ND91 283 aa12.84□□□□□ -0.35
GARNL3-220ENST00000496711 CCDC154A6NI56 674 aa12.84□□□□□ -0.35
GARNL3-220ENST00000496711 ZBBXA8MT70 800 aa12.84□□□□□ -0.35
GARNL3-220ENST00000496711 TAPBPO15533 448 aa12.84□□□□□ -0.35
GARNL3-220ENST00000496711 DENRO43583 198 aaKnown RBP12.84□□□□□ -0.35
GARNL3-220ENST00000496711 SYNCRIPO60506 623 aaKnown RBP12.84□□□□□ -0.35
GARNL3-220ENST00000496711 SLC6A2P23975 617 aa12.84□□□□□ -0.35
GARNL3-220ENST00000496711 DDX6P26196 483 aaKnown RBP eCLIP12.84□□□□□ -0.35
GARNL3-220ENST00000496711 HMOX2P30519 316 aa12.84□□□□□ -0.35
GARNL3-220ENST00000496711 HSPA7P48741 367 aa12.84□□□□□ -0.35
GARNL3-220ENST00000496711 POLR2JP52435 117 aaKnown RBP12.84□□□□□ -0.35
GARNL3-220ENST00000496711 UFM1P61960 85 aa12.84□□□□□ -0.35
GARNL3-220ENST00000496711 HTRA4P83105 476 aaPredicted RBP12.84□□□□□ -0.35
GARNL3-220ENST00000496711 SEMG2Q02383 582 aa12.84□□□□□ -0.35
GARNL3-220ENST00000496711 PHKG1Q16816 387 aa12.84□□□□□ -0.35
GARNL3-220ENST00000496711 CARD16Q5EG05 197 aa12.84□□□□□ -0.35
GARNL3-220ENST00000496711 Q6ZSR9 355 aa12.84□□□□□ -0.35
GARNL3-220ENST00000496711 ST13P4Q8IZP2 240 aaPredicted RBP12.84□□□□□ -0.35
GARNL3-220ENST00000496711 MARVELD2Q8N4S9 558 aa12.84□□□□□ -0.35
GARNL3-220ENST00000496711 ZUFSPQ96AP4 578 aa12.84□□□□□ -0.35
GARNL3-220ENST00000496711 SLCO4A1Q96BD0 722 aa12.84□□□□□ -0.35
GARNL3-220ENST00000496711 TEX37Q96LM6 180 aa12.84□□□□□ -0.35
GARNL3-220ENST00000496711 TCF25Q9BQ70 676 aa12.84□□□□□ -0.35
GARNL3-220ENST00000496711 TMEM79Q9BSE2 394 aa12.84□□□□□ -0.35
GARNL3-220ENST00000496711 IPPKQ9H8X2 491 aa12.84□□□□□ -0.35
GARNL3-220ENST00000496711 HEBP1Q9NRV9 189 aa12.84□□□□□ -0.35
GARNL3-220ENST00000496711 ZDHHC3Q9NYG2 299 aa12.84□□□□□ -0.35
GARNL3-220ENST00000496711 PCDH10Q9P2E7 1040 aa12.84□□□□□ -0.35
GARNL3-220ENST00000496711 LEF1Q9UJU2 399 aaPredicted RBP12.84□□□□□ -0.35
GARNL3-220ENST00000496711 CNOT11Q9UKZ1 510 aaKnown RBP12.84□□□□□ -0.35
GARNL3-220ENST00000496711 CNOT6Q9ULM6 557 aaKnown RBP12.84□□□□□ -0.35
GARNL3-220ENST00000496711 NOTCH4Q99466 2003 aa12.84□□□□□ -0.35
GARNL3-220ENST00000496711 FAM234BA2RU67 622 aa12.83□□□□□ -0.36
GARNL3-220ENST00000496711 ZNF839A8K0R7 811 aa12.83□□□□□ -0.36
GARNL3-220ENST00000496711 NEDD8-MDP1E9PL57 170 aa12.83□□□□□ -0.36
GARNL3-220ENST00000496711 FGF19O95750 216 aa12.83□□□□□ -0.36
GARNL3-220ENST00000496711 CBSLP0DN79 551 aa12.83□□□□□ -0.36
GARNL3-220ENST00000496711 PABPC1P11940 636 aaKnown RBP12.83□□□□□ -0.36
GARNL3-220ENST00000496711 LHCGRP22888 699 aa12.83□□□□□ -0.36
GARNL3-220ENST00000496711 PAX7P23759 505 aa12.83□□□□□ -0.36
GARNL3-220ENST00000496711 CBSP35520 551 aa12.83□□□□□ -0.36
GARNL3-220ENST00000496711 GRM2Q14416 872 aa12.83□□□□□ -0.36
GARNL3-220ENST00000496711 ZDHHC20Q5W0Z9 365 aa12.83□□□□□ -0.36
GARNL3-220ENST00000496711 ASTLQ6HA08 431 aaPredicted RBP12.83□□□□□ -0.36
GARNL3-220ENST00000496711 SULT1C3Q6IMI6 304 aa12.83□□□□□ -0.36
GARNL3-220ENST00000496711 TMEM25Q86YD3 366 aa12.83□□□□□ -0.36
GARNL3-220ENST00000496711 SFRP1Q8N474 314 aa12.83□□□□□ -0.36
GARNL3-220ENST00000496711 CLP1Q92989 425 aaKnown RBP12.83□□□□□ -0.36
GARNL3-220ENST00000496711 VPS33AQ96AX1 596 aa12.83□□□□□ -0.36
GARNL3-220ENST00000496711 ZNF641Q96N77 438 aaPredicted RBP12.83□□□□□ -0.36
GARNL3-220ENST00000496711 UHRF1Q96T88 793 aaPredicted RBP12.83□□□□□ -0.36
GARNL3-220ENST00000496711 RDH14Q9HBH5 336 aa12.83□□□□□ -0.36
GARNL3-220ENST00000496711 IL23AQ9NPF7 189 aa12.83□□□□□ -0.36
GARNL3-220ENST00000496711 LATS2Q9NRM7 1088 aa12.83□□□□□ -0.36
GARNL3-220ENST00000496711 CMTM6Q9NX76 183 aa12.83□□□□□ -0.36
GARNL3-220ENST00000496711 KCTD5Q9NXV2 234 aa12.83□□□□□ -0.36
GARNL3-220ENST00000496711 GMPR2Q9P2T1 348 aaKnown RBP12.83□□□□□ -0.36
GARNL3-220ENST00000496711 OPTCQ9UBM4 332 aa12.83□□□□□ -0.36
GARNL3-220ENST00000496711 ANGPTL3Q9Y5C1 460 aa12.83□□□□□ -0.36
GARNL3-220ENST00000496711 PCDHA9Q9Y5H5 950 aa12.83□□□□□ -0.36
GARNL3-220ENST00000496711 IRAK3Q9Y616 596 aa12.83□□□□□ -0.36
GARNL3-220ENST00000496711 AP4B1Q9Y6B7 739 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms