RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 WISP1O95388 367 aa12.68□□□□□ -0.38
FN1-226ENST00000496542 LPOP22079 712 aaPredicted RBP12.68□□□□□ -0.38
FN1-226ENST00000496542 FECHP22830 423 aa12.68□□□□□ -0.38
FN1-226ENST00000496542 OAS2P29728 719 aaKnown RBP12.68□□□□□ -0.38
FN1-226ENST00000496542 EIF3EP60228 445 aaKnown RBP12.68□□□□□ -0.38
FN1-226ENST00000496542 KCNC4Q03721 635 aa12.68□□□□□ -0.38
FN1-226ENST00000496542 MAP7Q14244 749 aa12.68□□□□□ -0.38
FN1-226ENST00000496542 TAF1AQ15573 450 aaPredicted RBP12.68□□□□□ -0.38
FN1-226ENST00000496542 LONRF2Q1L5Z9 754 aa12.68□□□□□ -0.38
FN1-226ENST00000496542 DEFB109BQ30KR1 87 aa12.68□□□□□ -0.38
FN1-226ENST00000496542 ATP1A1-AS1Q5TC04 95 aa12.68□□□□□ -0.38
FN1-226ENST00000496542 C16orf46Q6P387 395 aa12.68□□□□□ -0.38
FN1-226ENST00000496542 DARS2Q6PI48 645 aaKnown RBP12.68□□□□□ -0.38
FN1-226ENST00000496542 C6orf15Q6UXA7 325 aaPredicted RBP12.68□□□□□ -0.38
FN1-226ENST00000496542 ZNF398Q8TD17 642 aa12.68□□□□□ -0.38
FN1-226ENST00000496542 STAMBPL1Q96FJ0 436 aa12.68□□□□□ -0.38
FN1-226ENST00000496542 PANX2Q96RD6 677 aa12.68□□□□□ -0.38
FN1-226ENST00000496542 EPHA6Q9UF33 1036 aa12.68□□□□□ -0.38
FN1-226ENST00000496542 LNPEPQ9UIQ6 1025 aa12.68□□□□□ -0.38
FN1-226ENST00000496542 PCDHA3Q9Y5H8 950 aa12.68□□□□□ -0.38
FN1-226ENST00000496542 CFAP20Q9Y6A4 193 aaKnown RBP12.68□□□□□ -0.38
FN1-226ENST00000496542 DUSP10Q9Y6W6 482 aa12.68□□□□□ -0.38
FN1-226ENST00000496542 NAV2Q8IVL1 2488 aa12.68□□□□□ -0.38
FN1-226ENST00000496542 PIKFYVEQ9Y2I7 2098 aa12.67□□□□□ -0.38
FN1-226ENST00000496542 RBP3P10745 1247 aa12.67□□□□□ -0.38
FN1-226ENST00000496542 MTHFD1P11586 935 aaKnown RBP12.67□□□□□ -0.38
FN1-226ENST00000496542 NELFEP18615 380 aaKnown RBP12.67□□□□□ -0.38
FN1-226ENST00000496542 TCN2P20062 427 aa12.67□□□□□ -0.38
FN1-226ENST00000496542 DLSTP36957 453 aa12.67□□□□□ -0.38
FN1-226ENST00000496542 ZNF75DP51815 510 aa12.67□□□□□ -0.38
FN1-226ENST00000496542 RWDD2BP57060 319 aa12.67□□□□□ -0.38
FN1-226ENST00000496542 TMPRSS15P98073 1019 aa12.67□□□□□ -0.38
FN1-226ENST00000496542 MC1RQ01726 317 aa12.67□□□□□ -0.38
FN1-226ENST00000496542 PRPSAP1Q14558 356 aa12.67□□□□□ -0.38
FN1-226ENST00000496542 IL11RAQ14626 422 aa12.67□□□□□ -0.38
FN1-226ENST00000496542 ANKRD20A2Q5SQ80 823 aa12.67□□□□□ -0.38
FN1-226ENST00000496542 ANKRD20A1Q5TYW2 823 aa12.67□□□□□ -0.38
FN1-226ENST00000496542 ANKRD20A3Q5VUR7 823 aa12.67□□□□□ -0.38
FN1-226ENST00000496542 AADACL2Q6P093 401 aa12.67□□□□□ -0.38
FN1-226ENST00000496542 DUS1LQ6P1R4 473 aaKnown RBP12.67□□□□□ -0.38
FN1-226ENST00000496542 PTRH1Q86Y79 214 aaKnown RBP12.67□□□□□ -0.38
FN1-226ENST00000496542 CCDC110Q8TBZ0 833 aa12.67□□□□□ -0.38
FN1-226ENST00000496542 KLHL6Q8WZ60 621 aa12.67□□□□□ -0.38
FN1-226ENST00000496542 ZNF514Q96K75 400 aaPredicted RBP12.67□□□□□ -0.38
FN1-226ENST00000496542 WWP1Q9H0M0 922 aa12.67□□□□□ -0.38
FN1-226ENST00000496542 ASB8Q9H765 288 aa12.67□□□□□ -0.38
FN1-226ENST00000496542 CRLS1Q9UJA2 301 aa12.67□□□□□ -0.38
FN1-226ENST00000496542 CROTQ9UKG9 612 aa12.67□□□□□ -0.38
FN1-226ENST00000496542 AAR2Q9Y312 384 aaKnown RBP12.67□□□□□ -0.38
FN1-226ENST00000496542 EPN1Q9Y6I3 576 aaPredicted RBP12.67□□□□□ -0.38
FN1-226ENST00000496542 DNMT3AQ9Y6K1 912 aaPredicted RBP12.67□□□□□ -0.38
FN1-226ENST00000496542 DOPEY2Q9Y3R5 2298 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 IGHV5-51A0A0C4DH38 117 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 CCDC66A2RUB6 948 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 C5orf60A6NFR6 353 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 MGAT4DA6NG13 374 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 TERTO14746 1132 aaKnown RBP12.66□□□□□ -0.38
FN1-226ENST00000496542 SUV39H1O43463 412 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 SPAG6O75602 509 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 SRP72O76094 671 aaKnown RBP12.66□□□□□ -0.38
FN1-226ENST00000496542 SLC35G4P0C7Q5 338 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 FGF5P12034 268 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 F8A1P23610 371 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 PTPN7P35236 360 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 ADRA1AP35348 466 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 CETN2P41208 172 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 ARL4DP49703 201 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 TUBB3Q13509 450 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 SPARCL1Q14515 664 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 KCNAB1Q14722 419 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.66□□□□□ -0.382e-20■■□□□ 12.7
FN1-226ENST00000496542 DNTTIP2Q5QJE6 756 aaKnown RBP12.66□□□□□ -0.38
FN1-226ENST00000496542 METRNLQ641Q3 311 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 KLHL35Q6PF15 583 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 RANBP10Q6VN20 620 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 PPP1R3BQ86XI6 285 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 TMTC1Q8IUR5 882 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 SIDT2Q8NBJ9 832 aaKnown RBP12.66□□□□□ -0.38
FN1-226ENST00000496542 ACRBPQ8NEB7 543 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 OR13C4Q8NGS5 318 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 C9orf43Q8TAL5 461 aaPredicted RBP12.66□□□□□ -0.38
FN1-226ENST00000496542 UBXN4Q92575 508 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 ALG3Q92685 438 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 DCUN1D1Q96GG9 259 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 C12orf66Q96MD2 445 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 SPATA13Q96N96 652 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 INSM2Q96T92 566 aaPredicted RBP12.66□□□□□ -0.38
FN1-226ENST00000496542 TBL1YQ9BQ87 522 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 RAB33BQ9H082 229 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 TUBD1Q9UJT1 453 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 EFR3BQ9Y2G0 817 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 REXO2Q9Y3B8 237 aaKnown RBP12.66□□□□□ -0.38
FN1-226ENST00000496542 SEC16AO15027 2179 aa12.66□□□□□ -0.38
FN1-226ENST00000496542 GRID2IPA4D2P6 1211 aa12.65□□□□□ -0.38
FN1-226ENST00000496542 OR5K3A6NET4 321 aa12.65□□□□□ -0.38
FN1-226ENST00000496542 CCL22O00626 93 aa12.65□□□□□ -0.38
FN1-226ENST00000496542 KATNA1O75449 491 aa12.65□□□□□ -0.38
FN1-226ENST00000496542 TJP3O95049 919 aa12.65□□□□□ -0.38
FN1-226ENST00000496542 TIAF1O95411 115 aa12.65□□□□□ -0.38
FN1-226ENST00000496542 CRTAMO95727 393 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms