RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 FTOQ9C0B1 505 aaKnown RBP eCLIP5.25□□□□□ -1.57
SF3B1-212ENST00000496458 ACAD8Q9UKU7 415 aa5.25□□□□□ -1.57
SF3B1-212ENST00000496458 CMAHPQ9Y471 501 aa5.25□□□□□ -1.57
SF3B1-212ENST00000496458 LYVE1Q9Y5Y7 322 aa5.25□□□□□ -1.57
SF3B1-212ENST00000496458 DUXAA6NLW8 204 aa5.24□□□□□ -1.57
SF3B1-212ENST00000496458 CCER2I3L3R5 266 aa5.24□□□□□ -1.57
SF3B1-212ENST00000496458 TPPPO94811 219 aa5.24□□□□□ -1.57
SF3B1-212ENST00000496458 OR2C1O95371 312 aa5.24□□□□□ -1.57
SF3B1-212ENST00000496458 TSHBP01222 138 aa5.24□□□□□ -1.57
SF3B1-212ENST00000496458 CLTBP09497 229 aa5.24□□□□□ -1.57
SF3B1-212ENST00000496458 GABRB1P18505 474 aa5.24□□□□□ -1.57
SF3B1-212ENST00000496458 GNAZP19086 355 aa5.24□□□□□ -1.57
SF3B1-212ENST00000496458 ALDH4A1P30038 563 aa5.24□□□□□ -1.57
SF3B1-212ENST00000496458 CHRNB4P30926 498 aa5.24□□□□□ -1.57
SF3B1-212ENST00000496458 DCAF7P61962 342 aa5.24□□□□□ -1.57
SF3B1-212ENST00000496458 PPP2R2BQ00005 443 aa5.24□□□□□ -1.57
SF3B1-212ENST00000496458 FBXL22Q6P050 247 aa5.24□□□□□ -1.57
SF3B1-212ENST00000496458 FAM180BQ6P0A1 224 aa5.24□□□□□ -1.57
SF3B1-212ENST00000496458 C15orf39Q6ZRI6 1047 aa5.24□□□□□ -1.57
SF3B1-212ENST00000496458 CHST9Q7L1S5 443 aa5.24□□□□□ -1.57
SF3B1-212ENST00000496458 PPHLN1Q8NEY8 458 aaKnown RBP5.24□□□□□ -1.57
SF3B1-212ENST00000496458 SEMA4DQ92854 862 aa5.24□□□□□ -1.57
SF3B1-212ENST00000496458 HGH1Q9BTY7 390 aa5.24□□□□□ -1.57
SF3B1-212ENST00000496458 ZHX3Q9H4I2 956 aa5.24□□□□□ -1.57
SF3B1-212ENST00000496458 DNAJC18Q9H819 358 aa5.24□□□□□ -1.57
SF3B1-212ENST00000496458 PAG1Q9NWQ8 432 aa5.24□□□□□ -1.57
SF3B1-212ENST00000496458 FBXL17Q9UF56 701 aa5.24□□□□□ -1.57
SF3B1-212ENST00000496458 A0A0G2JLW4 131 aa5.23□□□□□ -1.57
SF3B1-212ENST00000496458 CLIC2O15247 247 aa5.23□□□□□ -1.57
SF3B1-212ENST00000496458 ZNF500O60304 480 aaPredicted RBP5.23□□□□□ -1.57
SF3B1-212ENST00000496458 GCNT3O95395 438 aa5.23□□□□□ -1.57
SF3B1-212ENST00000496458 RB1P06400 928 aa5.23□□□□□ -1.57
SF3B1-212ENST00000496458 ERVK-10P10266 1014 aa5.23□□□□□ -1.57
SF3B1-212ENST00000496458 HSD17B4P51659 736 aa5.23□□□□□ -1.57
SF3B1-212ENST00000496458 PPIGQ13427 754 aaKnown RBP eCLIP5.23□□□□□ -1.571e-10■■□□□ 11.5
SF3B1-212ENST00000496458 ARID3BQ8IVW6 561 aaPredicted RBP5.23□□□□□ -1.57
SF3B1-212ENST00000496458 APLFQ8IW19 511 aaPredicted RBP5.23□□□□□ -1.57
SF3B1-212ENST00000496458 TEX19Q8NA77 164 aa5.23□□□□□ -1.57
SF3B1-212ENST00000496458 SENP5Q96HI0 755 aaPredicted RBP5.23□□□□□ -1.57
SF3B1-212ENST00000496458 SRSF8Q9BRL6 282 aaKnown RBP5.23□□□□□ -1.57
SF3B1-212ENST00000496458 EIF2B3Q9NR50 452 aaKnown RBP5.23□□□□□ -1.57
SF3B1-212ENST00000496458 MBNL1Q9NR56 388 aaKnown RBP5.23□□□□□ -1.57
SF3B1-212ENST00000496458 SEPT11Q9NVA2 429 aaKnown RBP5.23□□□□□ -1.57
SF3B1-212ENST00000496458 ADPRHL2Q9NX46 363 aa5.23□□□□□ -1.57
SF3B1-212ENST00000496458 MIOSQ9NXC5 875 aa5.23□□□□□ -1.57
SF3B1-212ENST00000496458 C2CD2Q9Y426 696 aa5.23□□□□□ -1.57
SF3B1-212ENST00000496458 CECR2Q9BXF3 1484 aa5.23□□□□□ -1.57
SF3B1-212ENST00000496458 TEX13DA0A0J9YY54 714 aaPredicted RBP5.22□□□□□ -1.57
SF3B1-212ENST00000496458 F5H0A9 414 aaPredicted RBP5.22□□□□□ -1.57
SF3B1-212ENST00000496458 GH2P01242 217 aa5.22□□□□□ -1.57
SF3B1-212ENST00000496458 SERPINB2P05120 415 aa5.22□□□□□ -1.57
SF3B1-212ENST00000496458 PRSS56P0CW18 603 aa5.22□□□□□ -1.57
SF3B1-212ENST00000496458 PON1P27169 355 aa5.22□□□□□ -1.57
SF3B1-212ENST00000496458 TM4SF1P30408 202 aa5.22□□□□□ -1.57
SF3B1-212ENST00000496458 HOXC8P31273 242 aa5.22□□□□□ -1.57
SF3B1-212ENST00000496458 ERVK11-1P61568 191 aa5.22□□□□□ -1.57
SF3B1-212ENST00000496458 C14orf177Q52M58 125 aa5.22□□□□□ -1.57
SF3B1-212ENST00000496458 SCYL3Q8IZE3 742 aa5.22□□□□□ -1.57
SF3B1-212ENST00000496458 CTCFLQ8NI51 663 aaPredicted RBP5.22□□□□□ -1.57
SF3B1-212ENST00000496458 PGAM5Q96HS1 289 aa5.22□□□□□ -1.57
SF3B1-212ENST00000496458 DENND2DQ9H6A0 471 aaPredicted RBP5.22□□□□□ -1.57
SF3B1-212ENST00000496458 NENFQ9UMX5 172 aa5.22□□□□□ -1.57
SF3B1-212ENST00000496458 KCNK7Q9Y2U2 307 aa5.22□□□□□ -1.57
SF3B1-212ENST00000496458 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.22□□□□□ -1.57
SF3B1-212ENST00000496458 IGHV4-38-2P0DP08 117 aa5.21□□□□□ -1.58
SF3B1-212ENST00000496458 CKMT2P17540 419 aa5.21□□□□□ -1.58
SF3B1-212ENST00000496458 HOXA13P31271 388 aaPredicted RBP5.21□□□□□ -1.58
SF3B1-212ENST00000496458 PMP22Q01453 160 aa5.21□□□□□ -1.58
SF3B1-212ENST00000496458 MFAP5Q13361 173 aa5.21□□□□□ -1.58
SF3B1-212ENST00000496458 FAM53AQ6NSI3 398 aaPredicted RBP5.21□□□□□ -1.58
SF3B1-212ENST00000496458 ZNF248Q8NDW4 579 aa5.21□□□□□ -1.58
SF3B1-212ENST00000496458 TRIM58Q8NG06 486 aa5.21□□□□□ -1.58
SF3B1-212ENST00000496458 C1QTNF1Q9BXJ1 281 aa5.21□□□□□ -1.58
SF3B1-212ENST00000496458 DNAJB4Q9UDY4 337 aa5.21□□□□□ -1.58
SF3B1-212ENST00000496458 RUSC2Q8N2Y8 1516 aa5.21□□□□□ -1.58
SF3B1-212ENST00000496458 FLT1P17948 1338 aa5.21□□□□□ -1.58
SF3B1-212ENST00000496458 HHLA1C9JL84 531 aa5.2□□□□□ -1.58
SF3B1-212ENST00000496458 LDHCP07864 332 aa5.2□□□□□ -1.58
SF3B1-212ENST00000496458 CD48P09326 243 aa5.2□□□□□ -1.58
SF3B1-212ENST00000496458 CBLP22681 906 aa5.2□□□□□ -1.58
SF3B1-212ENST00000496458 NMBRP28336 390 aa5.2□□□□□ -1.58
SF3B1-212ENST00000496458 EPHA2P29317 976 aa5.2□□□□□ -1.58
SF3B1-212ENST00000496458 HADHAP40939 763 aa5.2□□□□□ -1.58
SF3B1-212ENST00000496458 GARSP41250 739 aaKnown RBP5.2□□□□□ -1.58
SF3B1-212ENST00000496458 ARF3P61204 181 aaPredicted RBP5.2□□□□□ -1.58
SF3B1-212ENST00000496458 GNB1P62873 340 aa5.2□□□□□ -1.58
SF3B1-212ENST00000496458 ARF1P84077 181 aaKnown RBP5.2□□□□□ -1.58
SF3B1-212ENST00000496458 GAGE2BQ13066 116 aa5.2□□□□□ -1.58
SF3B1-212ENST00000496458 SIM2Q14190 667 aaPredicted RBP5.2□□□□□ -1.58
SF3B1-212ENST00000496458 GAGE2EQ4V326 116 aa5.2□□□□□ -1.58
SF3B1-212ENST00000496458 GAGE2AQ6NT46 116 aa5.2□□□□□ -1.58
SF3B1-212ENST00000496458 TBC1D1Q86TI0 1168 aaPredicted RBP5.2□□□□□ -1.58
SF3B1-212ENST00000496458 TTC39CQ8N584 583 aa5.2□□□□□ -1.58
SF3B1-212ENST00000496458 LRR1Q96L50 414 aa5.2□□□□□ -1.58
SF3B1-212ENST00000496458 ZNF582Q96NG8 517 aaPredicted RBP5.2□□□□□ -1.58
SF3B1-212ENST00000496458 MOV10L1Q9BXT6 1211 aaKnown RBP5.2□□□□□ -1.58
SF3B1-212ENST00000496458 GAGE2DQ9UEU5 116 aa5.2□□□□□ -1.58
SF3B1-212ENST00000496458 PCDHGA5Q9Y5G8 931 aa5.2□□□□□ -1.58
SF3B1-212ENST00000496458 A0A1W2PR77 199 aa5.19□□□□□ -1.58
SF3B1-212ENST00000496458 PLOD2O00469 737 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms