RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 TWSG1Q9GZX9 223 aa22.73■■□□□ 1.23
COL27A1-208ENST00000494780 FLNCQ14315 2725 aa22.73■■□□□ 1.23
COL27A1-208ENST00000494780 CDC14CA4D256 554 aa22.72■■□□□ 1.23
COL27A1-208ENST00000494780 BUD23O43709 281 aaKnown RBP22.72■■□□□ 1.23
COL27A1-208ENST00000494780 TIAF1O95411 115 aa22.72■■□□□ 1.23
COL27A1-208ENST00000494780 MTHFD1P11586 935 aaKnown RBP22.72■■□□□ 1.23
COL27A1-208ENST00000494780 MSH3P20585 1137 aa22.72■■□□□ 1.23
COL27A1-208ENST00000494780 SRSF1Q07955 248 aaKnown RBP eCLIP22.72■■□□□ 1.233e-9■□□□□ 8.3
COL27A1-208ENST00000494780 PWWP2BQ6NUJ5 590 aa22.72■■□□□ 1.23
COL27A1-208ENST00000494780 RCOR2Q8IZ40 523 aa22.72■■□□□ 1.23
COL27A1-208ENST00000494780 CT55Q8WUE5 264 aa22.72■■□□□ 1.23
COL27A1-208ENST00000494780 MAP3K3Q99759 626 aa22.72■■□□□ 1.23
COL27A1-208ENST00000494780 FSD1LQ9BXM9 530 aa22.72■■□□□ 1.23
COL27A1-208ENST00000494780 IMP3Q9NV31 184 aaKnown RBP22.72■■□□□ 1.23
COL27A1-208ENST00000494780 RSPH14Q9UHP6 348 aa22.72■■□□□ 1.23
COL27A1-208ENST00000494780 PIPSLA2A3N6 862 aa22.71■■□□□ 1.23
COL27A1-208ENST00000494780 KLHL33A6NCF5 533 aa22.71■■□□□ 1.23
COL27A1-208ENST00000494780 OR5K3A6NET4 321 aa22.71■■□□□ 1.23
COL27A1-208ENST00000494780 TLCD2A6NGC4 264 aa22.71■■□□□ 1.23
COL27A1-208ENST00000494780 STX7O15400 261 aaKnown RBP22.71■■□□□ 1.23
COL27A1-208ENST00000494780 RFPL1O75677 317 aa22.71■■□□□ 1.23
COL27A1-208ENST00000494780 ARL4DP49703 201 aa22.71■■□□□ 1.23
COL27A1-208ENST00000494780 PMS2P54278 862 aa22.71■■□□□ 1.23
COL27A1-208ENST00000494780 XRCC4Q13426 336 aa22.71■■□□□ 1.23
COL27A1-208ENST00000494780 UBAP2LQ14157 1087 aaKnown RBP22.71■■□□□ 1.23
COL27A1-208ENST00000494780 DNTTIP2Q5QJE6 756 aaKnown RBP22.71■■□□□ 1.23
COL27A1-208ENST00000494780 FNBP1LQ5T0N5 605 aa22.71■■□□□ 1.23
COL27A1-208ENST00000494780 BEND7Q8N7W2 519 aaPredicted RBP22.71■■□□□ 1.23
COL27A1-208ENST00000494780 ZNF398Q8TD17 642 aa22.71■■□□□ 1.23
COL27A1-208ENST00000494780 ZFPM2Q8WW38 1151 aa22.71■■□□□ 1.23
COL27A1-208ENST00000494780 SEC14L1Q92503 715 aa22.71■■□□□ 1.23
COL27A1-208ENST00000494780 HAUS1Q96CS2 278 aa22.71■■□□□ 1.23
COL27A1-208ENST00000494780 ACSL5Q9ULC5 683 aa22.71■■□□□ 1.23
COL27A1-208ENST00000494780 NBASA2RRP1 2371 aa22.7■■□□□ 1.22
COL27A1-208ENST00000494780 MGAT4DA6NG13 374 aa22.7■■□□□ 1.22
COL27A1-208ENST00000494780 AKR1B15C9JRZ8 316 aaPredicted RBP22.7■■□□□ 1.22
COL27A1-208ENST00000494780 EBLN1P0CF75 366 aa22.7■■□□□ 1.22
COL27A1-208ENST00000494780 AKT1P31749 480 aa22.7■■□□□ 1.22
COL27A1-208ENST00000494780 KCNAB1Q14722 419 aa22.7■■□□□ 1.22
COL27A1-208ENST00000494780 TMEM135Q86UB9 458 aa22.7■■□□□ 1.22
COL27A1-208ENST00000494780 CCDC50Q8IVM0 306 aa22.7■■□□□ 1.22
COL27A1-208ENST00000494780 RBM41Q96IZ5 413 aaKnown RBP22.7■■□□□ 1.22
COL27A1-208ENST00000494780 INSM2Q96T92 566 aaPredicted RBP22.7■■□□□ 1.22
COL27A1-208ENST00000494780 GPR87Q9BY21 358 aa22.7■■□□□ 1.22
COL27A1-208ENST00000494780 WWP1Q9H0M0 922 aa22.7■■□□□ 1.22
COL27A1-208ENST00000494780 FGF21Q9NSA1 209 aa22.7■■□□□ 1.22
COL27A1-208ENST00000494780 HRASLS2Q9NWW9 162 aa22.7■■□□□ 1.22
COL27A1-208ENST00000494780 UBA6A0AVT1 1052 aaPredicted RBP22.69■■□□□ 1.22
COL27A1-208ENST00000494780 ANXA9O76027 345 aa22.69■■□□□ 1.22
COL27A1-208ENST00000494780 PRAMEF1O95521 474 aa22.69■■□□□ 1.22
COL27A1-208ENST00000494780 AGTP01019 485 aa22.69■■□□□ 1.22
COL27A1-208ENST00000494780 PYGMP11217 842 aa22.69■■□□□ 1.22
COL27A1-208ENST00000494780 LPOP22079 712 aaPredicted RBP22.69■■□□□ 1.22
COL27A1-208ENST00000494780 PBLDP30039 288 aaPredicted RBP22.69■■□□□ 1.22
COL27A1-208ENST00000494780 MAGEA1P43355 309 aa22.69■■□□□ 1.22
COL27A1-208ENST00000494780 GEMP55040 296 aa22.69■■□□□ 1.22
COL27A1-208ENST00000494780 HSD11B2P80365 405 aa22.69■■□□□ 1.22
COL27A1-208ENST00000494780 TAF1AQ15573 450 aaPredicted RBP22.69■■□□□ 1.22
COL27A1-208ENST00000494780 BBS12Q6ZW61 710 aa22.69■■□□□ 1.22
COL27A1-208ENST00000494780 OOSP2Q86WS3 158 aa22.69■■□□□ 1.22
COL27A1-208ENST00000494780 APLFQ8IW19 511 aaPredicted RBP22.69■■□□□ 1.22
COL27A1-208ENST00000494780 CARFQ8N187 725 aa22.69■■□□□ 1.22
COL27A1-208ENST00000494780 D2HGDHQ8N465 521 aa22.69■■□□□ 1.22
COL27A1-208ENST00000494780 OR2L2Q8NH16 312 aa22.69■■□□□ 1.22
COL27A1-208ENST00000494780 GBA3Q9H227 469 aa22.69■■□□□ 1.22
COL27A1-208ENST00000494780 GOLPH3Q9H4A6 298 aa22.69■■□□□ 1.22
COL27A1-208ENST00000494780 ACTL8Q9H568 366 aa22.69■■□□□ 1.22
COL27A1-208ENST00000494780 ANKMY1Q9P2S6 941 aa22.69■■□□□ 1.22
COL27A1-208ENST00000494780 TLK1Q9UKI8 766 aa22.69■■□□□ 1.22
COL27A1-208ENST00000494780 MAN2B2Q9Y2E5 1009 aa22.69■■□□□ 1.22
COL27A1-208ENST00000494780 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.69■■□□□ 1.22
COL27A1-208ENST00000494780 ARL5AQ9Y689 179 aa22.69■■□□□ 1.22
COL27A1-208ENST00000494780 CFAP20Q9Y6A4 193 aaKnown RBP22.69■■□□□ 1.22
COL27A1-208ENST00000494780 DOPEY2Q9Y3R5 2298 aa22.68■■□□□ 1.22
COL27A1-208ENST00000494780 C2orf81A6NN90 581 aa22.68■■□□□ 1.22
COL27A1-208ENST00000494780 K7EM74 188 aa22.68■■□□□ 1.22
COL27A1-208ENST00000494780 NR1D1P20393 614 aa22.68■■□□□ 1.22
COL27A1-208ENST00000494780 PTPRCAPQ14761 206 aa22.68■■□□□ 1.22
COL27A1-208ENST00000494780 ITPRIPL1Q6GPH6 555 aa22.68■■□□□ 1.22
COL27A1-208ENST00000494780 CERS6Q6ZMG9 384 aa22.68■■□□□ 1.22
COL27A1-208ENST00000494780 ASB18Q6ZVZ8 466 aa22.68■■□□□ 1.22
COL27A1-208ENST00000494780 DET1Q7L5Y6 550 aa22.68■■□□□ 1.22
COL27A1-208ENST00000494780 TEX19Q8NA77 164 aa22.68■■□□□ 1.22
COL27A1-208ENST00000494780 OR8K5Q8NH50 307 aa22.68■■□□□ 1.22
COL27A1-208ENST00000494780 C12orf66Q96MD2 445 aa22.68■■□□□ 1.22
COL27A1-208ENST00000494780 FICDQ9BVA6 458 aa22.68■■□□□ 1.22
COL27A1-208ENST00000494780 SLC24A2Q9UI40 661 aa22.68■■□□□ 1.22
COL27A1-208ENST00000494780 CLEC18AA5D8T8 446 aa22.67■■□□□ 1.22
COL27A1-208ENST00000494780 APOC4-APOC2K7ER74 178 aa22.67■■□□□ 1.22
COL27A1-208ENST00000494780 SRP72O76094 671 aaKnown RBP22.67■■□□□ 1.22
COL27A1-208ENST00000494780 ZBTB11O95625 1053 aaPredicted RBP22.67■■□□□ 1.22
COL27A1-208ENST00000494780 APOC2P02655 101 aa22.67■■□□□ 1.22
COL27A1-208ENST00000494780 NTRK1P04629 796 aa22.67■■□□□ 1.22
COL27A1-208ENST00000494780 RBL1P28749 1068 aa22.67■■□□□ 1.22
COL27A1-208ENST00000494780 PTPN4P29074 926 aa22.67■■□□□ 1.22
COL27A1-208ENST00000494780 MARCKSL1P49006 195 aa22.67■■□□□ 1.22
COL27A1-208ENST00000494780 TUBB4BP68371 445 aa22.67■■□□□ 1.22
COL27A1-208ENST00000494780 PDE1BQ01064 536 aa22.67■■□□□ 1.22
COL27A1-208ENST00000494780 TBX2Q13207 712 aaPredicted RBP22.67■■□□□ 1.22
COL27A1-208ENST00000494780 SEMA5AQ13591 1074 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms