RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 UBTD1Q9HAC8 227 aa4.29□□□□□ -1.72
SMC4-224ENST00000494612 TRPC7Q9HCX4 862 aa4.29□□□□□ -1.72
SMC4-224ENST00000494612 CD93Q9NPY3 652 aa4.29□□□□□ -1.72
SMC4-224ENST00000494612 SLC35C2Q9NQQ7 365 aa4.29□□□□□ -1.72
SMC4-224ENST00000494612 TCP11L1Q9NUJ3 509 aa4.29□□□□□ -1.72
SMC4-224ENST00000494612 PTTG2Q9NZH5 202 aa4.29□□□□□ -1.72
SMC4-224ENST00000494612 URB2Q14146 1524 aaKnown RBP4.29□□□□□ -1.72
SMC4-224ENST00000494612 CKAP5Q14008 2032 aa4.29□□□□□ -1.72
SMC4-224ENST00000494612 WIZO95785 1651 aa4.29□□□□□ -1.72
SMC4-224ENST00000494612 LOC100509620A0A075B734 347 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 A0A1W2PP11 408 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 PLSCR5A0PG75 271 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 OR5K3A6NET4 321 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 MAGEB17A8MXT2 336 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 H0YIN7 160 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 ZNHIT1O43257 154 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 LDB3O75112 727 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 TADA2AO75478 443 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 BMP10O95393 424 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 TPOP07202 933 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 CDH1P12830 882 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 HILS1P60008 231 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 PLIN5Q00G26 463 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 EEF1A2Q05639 463 aaKnown RBP4.28□□□□□ -1.72
SMC4-224ENST00000494612 PLA2G7Q13093 441 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 SNAPC1Q16533 368 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 C15orf59Q2T9L4 293 aaPredicted RBP4.28□□□□□ -1.72
SMC4-224ENST00000494612 KIF19Q2TAC6 998 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 KRT79Q5XKE5 535 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 RPUSD3Q6P087 351 aaKnown RBP4.28□□□□□ -1.72
SMC4-224ENST00000494612 FAM122CQ6P4D5 195 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 FAM171BQ6P995 826 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 ASB18Q6ZVZ8 466 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 C16orf82Q7Z2V1 217 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 SLC9B2Q86UD5 537 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 GUF1Q8N442 669 aaKnown RBP4.28□□□□□ -1.72
SMC4-224ENST00000494612 GCSAMQ8N6F7 178 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 C1orf52Q8N6N3 182 aaKnown RBP4.28□□□□□ -1.72
SMC4-224ENST00000494612 POMGNT2Q8NAT1 580 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 TAS1R2Q8TE23 839 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 PPP4R1Q8TF05 950 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 TEKT4Q8WW24 435 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 PHF21AQ96BD5 680 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 ERLEC1Q96DZ1 483 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 BICD1Q96G01 975 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 OXNAD1Q96HP4 312 aaPredicted RBP4.28□□□□□ -1.72
SMC4-224ENST00000494612 RADILQ96JH8 1075 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 PRMT6Q96LA8 375 aaPredicted RBP4.28□□□□□ -1.72
SMC4-224ENST00000494612 ZNF582Q96NG8 517 aaPredicted RBP4.28□□□□□ -1.72
SMC4-224ENST00000494612 DGAT2Q96PD7 388 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 TBC1D17Q9HA65 648 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 TMEM30AQ9NV96 361 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 TRMT1Q9NXH9 659 aaKnown RBP4.28□□□□□ -1.72
SMC4-224ENST00000494612 RCC2Q9P258 522 aaKnown RBP4.28□□□□□ -1.72
SMC4-224ENST00000494612 BCCIPQ9P287 314 aaKnown RBP eCLIP4.28□□□□□ -1.72
SMC4-224ENST00000494612 WDR35Q9P2L0 1181 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 MORF4L1Q9UBU8 362 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 PCDHGB1Q9Y5G3 927 aa4.28□□□□□ -1.72
SMC4-224ENST00000494612 CHD1O14646 1710 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 CFTRP13569 1480 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 ARAP1Q96P48 1450 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 IFT140Q96RY7 1462 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 A0A0B4J293 547 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 OR2M5A3KFT3 312 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 URADA6NGE7 173 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 EIF3DO15371 548 aaKnown RBP eCLIP4.27□□□□□ -1.73
SMC4-224ENST00000494612 IPO8O15397 1037 aaKnown RBP4.27□□□□□ -1.73
SMC4-224ENST00000494612 NDUFS4O43181 175 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 WDR1O75083 606 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 WISP2O76076 250 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 PPP1R3DO95685 299 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 NR2F2P24468 414 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 PSMC4P43686 418 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 ARSEP51690 589 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 FUT6P51993 359 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 ART1P52961 327 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 RUNX1T1Q06455 604 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 PRKAA1Q13131 559 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 BAATQ14032 418 aaPredicted RBP4.27□□□□□ -1.73
SMC4-224ENST00000494612 IL11RAQ14626 422 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 MELKQ14680 651 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 FIGLAQ6QHK4 219 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 ADIPOR2Q86V24 386 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 CEP57Q86XR8 500 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.27□□□□□ -1.73
SMC4-224ENST00000494612 OR6J1Q8NGC5 347 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 THAP6Q8TBB0 222 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 NXNL1Q96CM4 212 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 CNDP2Q96KP4 475 aaKnown RBP4.27□□□□□ -1.73
SMC4-224ENST00000494612 TTC14Q96N46 770 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 ZNF385AQ96PM9 386 aaKnown RBP4.27□□□□□ -1.73
SMC4-224ENST00000494612 OLFM1Q99784 485 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 SYT17Q9BSW7 474 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 C1QTNF4Q9BXJ3 329 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 C6orf106Q9H6K1 298 aaPredicted RBP4.27□□□□□ -1.73
SMC4-224ENST00000494612 SLA2Q9H6Q3 261 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 CCDC177Q9NQR7 707 aaPredicted RBP4.27□□□□□ -1.73
SMC4-224ENST00000494612 HAO2Q9NYQ3 351 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 AMACRQ9UHK6 382 aa4.27□□□□□ -1.73
SMC4-224ENST00000494612 POU2F3Q9UKI9 436 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms