RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 IVDP26440 423 aa11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 PSMB4P28070 264 aa11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 PLTPP55058 493 aa11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 MAXP61244 160 aa11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 AP1S1P61966 158 aa11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 MRPS25P82663 173 aaKnown RBP11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 ITKQ08881 620 aa11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 TRAF2Q12933 501 aa11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 NFATC2Q13469 925 aa11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 KCNJ11Q14654 390 aa11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 DCAF12Q5T6F0 453 aa11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 RAET1GQ6H3X3 334 aa11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 CENPUQ71F23 418 aa11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 PDIK1LQ8N165 341 aa11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 CBARPQ8N350 705 aaPredicted RBP11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 FAM26EQ8N5C1 309 aa11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 GLIS1Q8NBF1 620 aa11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 SLC37A2Q8TED4 501 aa11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 CPT1BQ92523 772 aa11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 SCAMP4Q969E2 229 aa11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 MIB2Q96AX9 1013 aa11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 DTD2Q96FN9 168 aa11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 DDA1Q9BW61 102 aa11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 B3GNT4Q9C0J1 378 aa11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 C10orf88Q9H8K7 445 aa11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 ARFGAP3Q9NP61 516 aa11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 NT5MQ9NPB1 228 aa11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 PHPT1Q9NRX4 125 aaPredicted RBP11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 GRHL1Q9NZI5 618 aa11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 FAM153AQ9UHL3 310 aa11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 NFU1Q9UMS0 254 aa11.6□□□□□ -0.55
CSNK1E-212ENST00000494610 AP2A1O95782 977 aa11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 PDGFAP04085 211 aa11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 NTRK1P04629 796 aa11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 MLNP12872 115 aa11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 MAPK9P45984 424 aa11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 GPR3P46089 330 aa11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 CSNK1DP48730 415 aa11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 CARSP49589 748 aaKnown RBP11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 NSUN2Q08J23 767 aaKnown RBP eCLIP11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 HIF1AQ16665 826 aa11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 FAM182AQ5T1J6 154 aa11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 TMEM71Q6P5X7 295 aa11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 B4GALNT4Q76KP1 1039 aa11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 KLHDC8BQ8IXV7 354 aa11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 NLGN4XQ8N0W4 816 aa11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 NAT8LQ8N9F0 302 aa11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 NLGN4YQ8NFZ3 816 aaPredicted RBP11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 FBXO25Q8TCJ0 367 aa11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 STARD8Q92502 1023 aa11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 NCSTNQ92542 709 aa11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 CAVIN3Q969G5 261 aa11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 LRRC39Q96DD0 335 aa11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 PKNOX2Q96KN3 472 aa11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 NUDCD1Q96RS6 583 aa11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 ETNK1Q9HBU6 452 aa11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 NOD2Q9HC29 1040 aa11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 ZDHHC18Q9NUE0 388 aa11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 TRNAU1APQ9NX07 287 aaKnown RBP11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 TUBD1Q9UJT1 453 aa11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 ANAPC2Q9UJX6 822 aa11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 SLC17A4Q9Y2C5 497 aa11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 CREBBPQ92793 2442 aa11.59□□□□□ -0.55
CSNK1E-212ENST00000494610 CACNA1DQ01668 2161 aa11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 A0A1W2PQ67 120 aa11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 B4E171 279 aa11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 INPP4BO15327 924 aa11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 STK17BO94768 372 aa11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 SUN1O94901 812 aa11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 CPP00450 1065 aa11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 PDHA1P08559 390 aa11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 NFKBIAP25963 317 aa11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 VIPR1P32241 457 aa11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 TSPAN7P41732 249 aa11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 MC2RQ01718 297 aa11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 TRA2AQ13595 282 aaKnown RBP eCLIP11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 IHHQ14623 411 aa11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 LACTB2Q53H82 288 aaPredicted RBP11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 KDELC2Q7Z4H8 507 aa11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 ARHGAP22Q7Z5H3 698 aa11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 CNTD1Q8N815 330 aa11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 LRRN4Q8WUT4 740 aa11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 APOBEC4Q8WW27 367 aaKnown RBP11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 IMP4Q96G21 291 aaKnown RBP11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 AHCYL2Q96HN2 611 aaKnown RBP11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 ELMO2Q96JJ3 720 aa11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 TTC25Q96NG3 672 aa11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 SLC38A3Q99624 504 aa11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 TBC1D10AQ9BXI6 508 aa11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 CEP41Q9BYV8 373 aa11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 ASPSCR1Q9BZE9 553 aa11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 ABCG8Q9H221 673 aa11.58□□□□□ -0.56
CSNK1E-212ENST00000494610 HTRA2O43464 458 aaPredicted RBP11.57□□□□□ -0.56
CSNK1E-212ENST00000494610 DNAJB5O75953 348 aa11.57□□□□□ -0.56
CSNK1E-212ENST00000494610 METTL18O95568 372 aa11.57□□□□□ -0.56
CSNK1E-212ENST00000494610 IVLP07476 585 aa11.57□□□□□ -0.56
CSNK1E-212ENST00000494610 H2AFXP16104 143 aaPredicted RBP11.57□□□□□ -0.56
CSNK1E-212ENST00000494610 HLA-DPA1P20036 260 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms