RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 MYRIPQ8NFW9 859 aa7.47□□□□□ -1.21
VEGFA-214ENST00000493786 FAM45AQ8TCE6 357 aa7.47□□□□□ -1.21
VEGFA-214ENST00000493786 SAP25Q8TEE9 199 aa7.47□□□□□ -1.21
VEGFA-214ENST00000493786 AENQ8WTP8 325 aaKnown RBP7.47□□□□□ -1.21
VEGFA-214ENST00000493786 SETD7Q8WTS6 366 aaKnown RBP7.47□□□□□ -1.21
VEGFA-214ENST00000493786 ZDHHC1Q8WTX9 485 aa7.47□□□□□ -1.21
VEGFA-214ENST00000493786 NAT14Q8WUY8 206 aa7.47□□□□□ -1.21
VEGFA-214ENST00000493786 SKA2Q8WVK7 121 aaPredicted RBP7.47□□□□□ -1.21
VEGFA-214ENST00000493786 KCNJ9Q92806 393 aa7.47□□□□□ -1.21
VEGFA-214ENST00000493786 CAVIN3Q969G5 261 aa7.47□□□□□ -1.21
VEGFA-214ENST00000493786 TMEM159Q96B96 161 aa7.47□□□□□ -1.21
VEGFA-214ENST00000493786 MRRFQ96E11 262 aaKnown RBP7.47□□□□□ -1.21
VEGFA-214ENST00000493786 CCDC97Q96F63 343 aaPredicted RBP7.47□□□□□ -1.21
VEGFA-214ENST00000493786 TSPAN17Q96FV3 270 aa7.47□□□□□ -1.21
VEGFA-214ENST00000493786 ATXN7L3BQ96GX2 97 aa7.47□□□□□ -1.21
VEGFA-214ENST00000493786 ELMO2Q96JJ3 720 aa7.47□□□□□ -1.21
VEGFA-214ENST00000493786 AARSD1Q9BTE6 412 aaKnown RBP7.47□□□□□ -1.21
VEGFA-214ENST00000493786 RHOJQ9H4E5 214 aa7.47□□□□□ -1.21
VEGFA-214ENST00000493786 PPCSQ9HAB8 311 aa7.47□□□□□ -1.21
VEGFA-214ENST00000493786 UCKL1Q9NWZ5 548 aa7.47□□□□□ -1.21
VEGFA-214ENST00000493786 TAS2R13Q9NYV9 303 aa7.47□□□□□ -1.21
VEGFA-214ENST00000493786 NCKIPSDQ9NZQ3 722 aa7.47□□□□□ -1.21
VEGFA-214ENST00000493786 TAAR2Q9P1P5 351 aa7.47□□□□□ -1.21
VEGFA-214ENST00000493786 SLC17A6Q9P2U8 582 aa7.47□□□□□ -1.21
VEGFA-214ENST00000493786 RABGEF1Q9UJ41 708 aa7.47□□□□□ -1.21
VEGFA-214ENST00000493786 TRMT6Q9UJA5 497 aaKnown RBP7.47□□□□□ -1.21
VEGFA-214ENST00000493786 ACSL5Q9ULC5 683 aa7.47□□□□□ -1.21
VEGFA-214ENST00000493786 PNMA8BQ9ULN7 279 aaPredicted RBP7.47□□□□□ -1.21
VEGFA-214ENST00000493786 PRSS21Q9Y6M0 314 aa7.47□□□□□ -1.21
VEGFA-214ENST00000493786 LAMA1P25391 3075 aa7.47□□□□□ -1.21
VEGFA-214ENST00000493786 FAM95CA0A1B0GW59 222 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 CCDC151A5D8V7 595 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 PABPN1LA6NDY0 278 aaKnown RBP7.46□□□□□ -1.22
VEGFA-214ENST00000493786 OR5K4A6NMS3 321 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 IQCF5A8MTL0 148 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 CXorf49A8MYA2 514 aaPredicted RBP7.46□□□□□ -1.22
VEGFA-214ENST00000493786 POC1B-GALNT4F8VUJ3 575 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 CDX4O14627 284 aaPredicted RBP7.46□□□□□ -1.22
VEGFA-214ENST00000493786 YY2O15391 372 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 NIPSNAP2O75323 286 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 PIAS1O75925 651 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 KRT38O76015 456 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 CELA2BP08218 269 aaPredicted RBP7.46□□□□□ -1.22
VEGFA-214ENST00000493786 F7P08709 466 aaPredicted RBP7.46□□□□□ -1.22
VEGFA-214ENST00000493786 CNTFP26441 200 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 RPL10P27635 214 aaKnown RBP7.46□□□□□ -1.22
VEGFA-214ENST00000493786 HSD17B3P37058 310 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 SKIV2L2P42285 1042 aaKnown RBP7.46□□□□□ -1.22
VEGFA-214ENST00000493786 ABCG1P45844 678 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 RGS4P49798 205 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 SERPINB9P50453 376 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 DUSP3P51452 185 aaPredicted RBP7.46□□□□□ -1.22
VEGFA-214ENST00000493786 LIMK2P53671 638 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 DAB2P98082 770 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 DMPKQ09013 629 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 HSPA14Q0VDF9 509 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 RPA4Q13156 261 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 PDAP1Q13442 181 aaKnown RBP7.46□□□□□ -1.22
VEGFA-214ENST00000493786 NFE2L1Q14494 772 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 KRT33BQ14525 404 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 SLC29A2Q14542 456 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 EFTUD2Q15029 972 aaKnown RBP eCLIP7.46□□□□□ -1.223e-19■■■■□ 23.7
VEGFA-214ENST00000493786 SHBQ15464 509 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 ZNF789Q5FWF6 425 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 CTSL3PQ5NE16 218 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 PLEKHS1Q5SXH7 462 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 C6orf132Q5T0Z8 1188 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 HECTD2Q5U5R9 776 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 ZCCHC8Q6NZY4 707 aaKnown RBP7.46□□□□□ -1.22
VEGFA-214ENST00000493786 C11orf96Q7Z7L8 435 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 SLC9B2Q86UD5 537 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 ZC3HC1Q86WB0 502 aaKnown RBP7.46□□□□□ -1.22
VEGFA-214ENST00000493786 NRROSQ86YC3 692 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 NAXDQ8IW45 347 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 KRT222Q8N1A0 295 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 ZBTB2Q8N680 514 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 EID2Q8N6I1 236 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 ARL10Q8N8L6 244 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 OR4C6Q8NH72 309 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 CCL4L1Q8NHW4 92 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 MAPK15Q8TD08 544 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 NETO1Q8TDF5 533 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 ASZ1Q8WWH4 475 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 CXorf40BQ96DE9 158 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 FOPNLQ96NB1 174 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 BIRC8Q96P09 236 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 PAFAH2Q99487 392 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 NDNQ99608 321 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 RBBP8Q99708 897 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 FUT8Q9BYC5 575 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 TXLNGYQ9BZA5 131 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 SLC32A1Q9H598 525 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 COG4Q9H9E3 785 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 SMYD2Q9NRG4 433 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 SIRPGQ9P1W8 387 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 GULP1Q9UBP9 304 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 FTSJ1Q9UET6 329 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 SLC23A2Q9UGH3 650 aa7.46□□□□□ -1.22
VEGFA-214ENST00000493786 CDV3Q9UKY7 258 aaKnown RBP7.46□□□□□ -1.22
VEGFA-214ENST00000493786 SLC39A10Q9ULF5 831 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms