RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 FBXO6Q9NRD1 293 aaPredicted RBP16.54■□□□□ 0.24
RER1-208ENST00000493207 INTS10Q9NVR2 710 aaKnown RBP16.54■□□□□ 0.24
RER1-208ENST00000493207 SCHIP1Q9P0W5 487 aaPredicted RBP16.54■□□□□ 0.24
RER1-208ENST00000493207 GNPTGQ9UJJ9 305 aa16.54■□□□□ 0.24
RER1-208ENST00000493207 PSMD13Q9UNM6 376 aa16.54■□□□□ 0.24
RER1-208ENST00000493207 APOBEC2Q9Y235 224 aaKnown RBP16.54■□□□□ 0.24
RER1-208ENST00000493207 WDR37Q9Y2I8 494 aa16.54■□□□□ 0.24
RER1-208ENST00000493207 CRYL1Q9Y2S2 319 aa16.54■□□□□ 0.24
RER1-208ENST00000493207 RNF215Q9Y6U7 377 aa16.54■□□□□ 0.24
RER1-208ENST00000493207 SPTBN4Q9H254 2564 aa16.54■□□□□ 0.24
RER1-208ENST00000493207 C17orf113A0A1B0GUU1 675 aa16.53■□□□□ 0.24
RER1-208ENST00000493207 EME2A4GXA9 379 aaPredicted RBP16.53■□□□□ 0.24
RER1-208ENST00000493207 IQCF5A8MTL0 148 aa16.53■□□□□ 0.24
RER1-208ENST00000493207 F8W8V4 182 aa16.53■□□□□ 0.24
RER1-208ENST00000493207 S1PR4O95977 384 aa16.53■□□□□ 0.24
RER1-208ENST00000493207 SLC2A4P14672 509 aa16.53■□□□□ 0.24
RER1-208ENST00000493207 ITGB6P18564 788 aa16.53■□□□□ 0.24
RER1-208ENST00000493207 RPS3P23396 243 aaKnown RBP eCLIP16.53■□□□□ 0.244e-7■■□□□ 12.1
RER1-208ENST00000493207 FMO4P31512 558 aa16.53■□□□□ 0.24
RER1-208ENST00000493207 CARSP49589 748 aaKnown RBP16.53■□□□□ 0.24
RER1-208ENST00000493207 MPP1Q00013 466 aa16.53■□□□□ 0.24
RER1-208ENST00000493207 PERM1Q5SV97 790 aa16.53■□□□□ 0.24
RER1-208ENST00000493207 TEX35Q5T0J7 233 aa16.53■□□□□ 0.24
RER1-208ENST00000493207 METRNLQ641Q3 311 aa16.53■□□□□ 0.24
RER1-208ENST00000493207 PTRHD1Q6GMV3 140 aaKnown RBP16.53■□□□□ 0.24
RER1-208ENST00000493207 TRMT10BQ6PF06 316 aaKnown RBP16.53■□□□□ 0.24
RER1-208ENST00000493207 LRRC6Q86X45 466 aa16.53■□□□□ 0.24
RER1-208ENST00000493207 C17orf82Q86X59 251 aaPredicted RBP16.53■□□□□ 0.24
RER1-208ENST00000493207 PALM2Q8IXS6 379 aa16.53■□□□□ 0.24
RER1-208ENST00000493207 LMNTD2Q8IXW0 634 aa16.53■□□□□ 0.24
RER1-208ENST00000493207 KRT222Q8N1A0 295 aa16.53■□□□□ 0.24
RER1-208ENST00000493207 SFRP1Q8N474 314 aa16.53■□□□□ 0.24
RER1-208ENST00000493207 GABPB2Q8TAK5 448 aaPredicted RBP16.53■□□□□ 0.24
RER1-208ENST00000493207 GSDMBQ8TAX9 411 aa16.53■□□□□ 0.24
RER1-208ENST00000493207 SLC37A2Q8TED4 501 aa16.53■□□□□ 0.24
RER1-208ENST00000493207 NAT6Q93015 286 aa16.53■□□□□ 0.24
RER1-208ENST00000493207 CCDC74AQ96AQ1 378 aa16.53■□□□□ 0.24
RER1-208ENST00000493207 C9orf72Q96LT7 481 aa16.53■□□□□ 0.24
RER1-208ENST00000493207 TSSK1BQ9BXA7 367 aa16.53■□□□□ 0.24
RER1-208ENST00000493207 FAM129AQ9BZQ8 928 aa16.53■□□□□ 0.24
RER1-208ENST00000493207 LRIT1Q9P2V4 623 aa16.53■□□□□ 0.24
RER1-208ENST00000493207 MTRF1LQ9UGC7 380 aaKnown RBP16.53■□□□□ 0.24
RER1-208ENST00000493207 FBXO5Q9UKT4 447 aa16.53■□□□□ 0.24
RER1-208ENST00000493207 VPS9D1Q9Y2B5 631 aa16.53■□□□□ 0.24
RER1-208ENST00000493207 GOLGA4Q13439 2230 aaKnown RBP16.52■□□□□ 0.24
RER1-208ENST00000493207 OR52A4PA6NMU1 304 aa16.52■□□□□ 0.24
RER1-208ENST00000493207 RHPN2P1A8MT19 583 aa16.52■□□□□ 0.24
RER1-208ENST00000493207 TRIM16O95361 564 aa16.52■□□□□ 0.24
RER1-208ENST00000493207 GSTM1P09488 218 aa16.52■□□□□ 0.24
RER1-208ENST00000493207 BRAFP15056 766 aa16.52■□□□□ 0.24
RER1-208ENST00000493207 GLB1P16278 677 aa16.52■□□□□ 0.24
RER1-208ENST00000493207 MAGEA4P43358 317 aa16.52■□□□□ 0.24
RER1-208ENST00000493207 GSTM4Q03013 218 aa16.52■□□□□ 0.24
RER1-208ENST00000493207 BIRC2Q13490 618 aa16.52■□□□□ 0.24
RER1-208ENST00000493207 FRG1Q14331 258 aaKnown RBP16.52■□□□□ 0.24
RER1-208ENST00000493207 CLCA4Q14CN2 919 aa16.52■□□□□ 0.24
RER1-208ENST00000493207 BRD3Q15059 726 aa16.52■□□□□ 0.24
RER1-208ENST00000493207 ZNF658BQ4V348 819 aaPredicted RBP16.52■□□□□ 0.24
RER1-208ENST00000493207 CTSL3PQ5NE16 218 aa16.52■□□□□ 0.24
RER1-208ENST00000493207 AGAP9Q5VTM2 703 aa16.52■□□□□ 0.24
RER1-208ENST00000493207 WASH2PQ6VEQ5 465 aa16.52■□□□□ 0.24
RER1-208ENST00000493207 NAPRTQ6XQN6 538 aa16.52■□□□□ 0.24
RER1-208ENST00000493207 SLC9B2Q86UD5 537 aa16.52■□□□□ 0.24
RER1-208ENST00000493207 C2CD4AQ8NCU7 369 aaPredicted RBP16.52■□□□□ 0.24
RER1-208ENST00000493207 OR6C4Q8NGE1 309 aa16.52■□□□□ 0.24
RER1-208ENST00000493207 LKAAEAR1Q8TD35 194 aa16.52■□□□□ 0.24
RER1-208ENST00000493207 ELMO1Q92556 727 aa16.52■□□□□ 0.24
RER1-208ENST00000493207 BIRC8Q96P09 236 aa16.52■□□□□ 0.24
RER1-208ENST00000493207 WWP1Q9H0M0 922 aa16.52■□□□□ 0.24
RER1-208ENST00000493207 COG4Q9H9E3 785 aa16.52■□□□□ 0.24
RER1-208ENST00000493207 WASH6PQ9NQA3 447 aa16.52■□□□□ 0.24
RER1-208ENST00000493207 SLC17A6Q9P2U8 582 aa16.52■□□□□ 0.24
RER1-208ENST00000493207 RABGEF1Q9UJ41 708 aa16.52■□□□□ 0.24
RER1-208ENST00000493207 ACSL5Q9ULC5 683 aa16.52■□□□□ 0.24
RER1-208ENST00000493207 KIR2DS5A0A0G2JLQ3 304 aa16.51■□□□□ 0.23
RER1-208ENST00000493207 A0A0G2JNG1 304 aa16.51■□□□□ 0.23
RER1-208ENST00000493207 OR5K4A6NMS3 321 aa16.51■□□□□ 0.23
RER1-208ENST00000493207 KIR2DS3K7RE56 304 aa16.51■□□□□ 0.23
RER1-208ENST00000493207 PPM1DO15297 605 aa16.51■□□□□ 0.23
RER1-208ENST00000493207 NUDT21O43809 227 aaKnown RBP16.51■□□□□ 0.23
RER1-208ENST00000493207 DKK1O94907 266 aa16.51■□□□□ 0.23
RER1-208ENST00000493207 HAUS5O94927 633 aa16.51■□□□□ 0.23
RER1-208ENST00000493207 GP1BAP07359 652 aa16.51■□□□□ 0.23
RER1-208ENST00000493207 ECHS1P30084 290 aa16.51■□□□□ 0.23
RER1-208ENST00000493207 SSTR1P30872 391 aa16.51■□□□□ 0.23
RER1-208ENST00000493207 HALP42357 657 aa16.51■□□□□ 0.23
RER1-208ENST00000493207 PREPP48147 710 aa16.51■□□□□ 0.23
RER1-208ENST00000493207 ADARP55265 1226 aaKnown RBP16.51■□□□□ 0.23
RER1-208ENST00000493207 HHEXQ03014 270 aa16.51■□□□□ 0.23
RER1-208ENST00000493207 ILKQ13418 452 aa16.51■□□□□ 0.23
RER1-208ENST00000493207 CUL1Q13616 776 aa16.51■□□□□ 0.23
RER1-208ENST00000493207 BOP1Q14137 746 aaKnown RBP16.51■□□□□ 0.23
RER1-208ENST00000493207 KIR2DS5Q14953 304 aa16.51■□□□□ 0.23
RER1-208ENST00000493207 SYTL3Q4VX76 610 aa16.51■□□□□ 0.23
RER1-208ENST00000493207 TEDDM1Q5T9Z0 273 aa16.51■□□□□ 0.23
RER1-208ENST00000493207 N4BP2L1Q5TBK1 243 aaPredicted RBP16.51■□□□□ 0.23
RER1-208ENST00000493207 ABRAXAS1Q6UWZ7 409 aa16.51■□□□□ 0.23
RER1-208ENST00000493207 CNTN4Q8IWV2 1026 aa16.51■□□□□ 0.23
RER1-208ENST00000493207 IFT20Q8IY31 132 aa16.51■□□□□ 0.23
RER1-208ENST00000493207 Q8N9G6 341 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms